RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 CNTNAP4Q9C0A0 1308 aa16.78■□□□□ 0.28
TRAIP-201ENST00000331456 MYH14Q7Z406 1995 aaKnown RBP16.78■□□□□ 0.28
TRAIP-201ENST00000331456 PSMA5P28066 241 aa16.77■□□□□ 0.28
TRAIP-201ENST00000331456 NOL8Q76FK4 1167 aaKnown RBP16.77■□□□□ 0.28
TRAIP-201ENST00000331456 LINC00116Q8NCU8 138 aa16.77■□□□□ 0.28
TRAIP-201ENST00000331456 JAKMIP1Q96N16 626 aaKnown RBP16.77■□□□□ 0.28
TRAIP-201ENST00000331456 HMG20BQ9P0W2 317 aa16.77■□□□□ 0.28
TRAIP-201ENST00000331456 CYP46A1Q9Y6A2 500 aa16.77■□□□□ 0.28
TRAIP-201ENST00000331456 ABCC12Q96J65 1359 aa16.77■□□□□ 0.27
TRAIP-201ENST00000331456 TAF5LO75529 589 aa16.77■□□□□ 0.27
TRAIP-201ENST00000331456 ZGPATQ8N5A5 531 aaKnown RBP16.77■□□□□ 0.27
TRAIP-201ENST00000331456 TTC14Q96N46 770 aa16.77■□□□□ 0.27
TRAIP-201ENST00000331456 HELLSQ9NRZ9 838 aa16.77■□□□□ 0.27
TRAIP-201ENST00000331456 RIC1Q4ADV7 1423 aa16.77■□□□□ 0.27
TRAIP-201ENST00000331456 FAM177BA6PVY3 158 aa16.76■□□□□ 0.27
TRAIP-201ENST00000331456 SLC27A2O14975 620 aa16.76■□□□□ 0.27
TRAIP-201ENST00000331456 RGL2O15211 777 aa16.76■□□□□ 0.27
TRAIP-201ENST00000331456 SSFA2P28290 1259 aa16.76■□□□□ 0.27
TRAIP-201ENST00000331456 HSPA1LP34931 641 aa16.76■□□□□ 0.27
TRAIP-201ENST00000331456 ZNF589Q86UQ0 364 aaPredicted RBP16.76■□□□□ 0.27
TRAIP-201ENST00000331456 GJD4Q96KN9 370 aaPredicted RBP16.76■□□□□ 0.27
TRAIP-201ENST00000331456 ZSWIM6Q9HCJ5 1215 aa16.76■□□□□ 0.27
TRAIP-201ENST00000331456 GOLGA6L22H0YM25 854 aa16.75■□□□□ 0.27
TRAIP-201ENST00000331456 HCLS1P14317 486 aaPredicted RBP16.75■□□□□ 0.27
TRAIP-201ENST00000331456 CCDC152Q4G0S7 254 aa16.75■□□□□ 0.27
TRAIP-201ENST00000331456 VPS53Q5VIR6 699 aa16.75■□□□□ 0.27
TRAIP-201ENST00000331456 PDRG1Q9NUG6 133 aa16.75■□□□□ 0.27
TRAIP-201ENST00000331456 LIMCH1Q9UPQ0 1083 aa16.75■□□□□ 0.27
TRAIP-201ENST00000331456 MROH5Q6ZUA9 1318 aa16.75■□□□□ 0.27
TRAIP-201ENST00000331456 ADORA1P30542 326 aa16.75■□□□□ 0.27
TRAIP-201ENST00000331456 RC3H1Q5TC82 1133 aaKnown RBP16.75■□□□□ 0.27
TRAIP-201ENST00000331456 CLEC17AQ6ZS10 378 aa16.75■□□□□ 0.27
TRAIP-201ENST00000331456 U3KPZ7 1027 aaPredicted RBP16.75■□□□□ 0.27
TRAIP-201ENST00000331456 AFF2P51816 1311 aa16.75■□□□□ 0.27
TRAIP-201ENST00000331456 NHSQ6T4R5 1651 aa16.75■□□□□ 0.27
TRAIP-201ENST00000331456 BCORQ6W2J9 1755 aa16.74■□□□□ 0.27
TRAIP-201ENST00000331456 RNF113AO15541 343 aaKnown RBP16.74■□□□□ 0.27
TRAIP-201ENST00000331456 NTSR2O95665 410 aa16.74■□□□□ 0.27
TRAIP-201ENST00000331456 AK2P54819 239 aa16.74■□□□□ 0.27
TRAIP-201ENST00000331456 USPL1Q5W0Q7 1092 aa16.74■□□□□ 0.27
TRAIP-201ENST00000331456 RUFY3Q7L099 469 aa16.74■□□□□ 0.27
TRAIP-201ENST00000331456 PDE8BO95263 885 aa16.74■□□□□ 0.27
TRAIP-201ENST00000331456 CYP2E1P05181 493 aaPredicted RBP16.74■□□□□ 0.27
TRAIP-201ENST00000331456 FKBP4Q02790 459 aaKnown RBP eCLIP16.74■□□□□ 0.27
TRAIP-201ENST00000331456 KRT32Q14532 448 aa16.74■□□□□ 0.27
TRAIP-201ENST00000331456 ZFYP08048 801 aaPredicted RBP16.73■□□□□ 0.27
TRAIP-201ENST00000331456 ADCK5Q3MIX3 580 aa16.73■□□□□ 0.27
TRAIP-201ENST00000331456 TSGA10IPQ3SY00 556 aa16.73■□□□□ 0.27
TRAIP-201ENST00000331456 ZMYM1Q5SVZ6 1142 aa16.73■□□□□ 0.27
TRAIP-201ENST00000331456 ZSCAN31Q96LW9 406 aaPredicted RBP16.73■□□□□ 0.27
TRAIP-201ENST00000331456 MPHOSPH8Q99549 860 aa16.73■□□□□ 0.27
TRAIP-201ENST00000331456 TRPC5Q9UL62 973 aaPredicted RBP16.73■□□□□ 0.27
TRAIP-201ENST00000331456 RTL9Q8NET4 1388 aa16.73■□□□□ 0.27
TRAIP-201ENST00000331456 BTAF1O14981 1849 aa16.72■□□□□ 0.27
TRAIP-201ENST00000331456 VGLL2Q8N8G2 317 aa16.72■□□□□ 0.27
TRAIP-201ENST00000331456 ZNF512BQ96KM6 892 aaPredicted RBP16.72■□□□□ 0.27
TRAIP-201ENST00000331456 LRP5O75197 1615 aa16.72■□□□□ 0.27
TRAIP-201ENST00000331456 RPAP1Q9BWH6 1393 aaPredicted RBP16.72■□□□□ 0.27
TRAIP-201ENST00000331456 TRAK2O60296 914 aa16.72■□□□□ 0.27
TRAIP-201ENST00000331456 PUM3Q15397 648 aaKnown RBP16.72■□□□□ 0.27
TRAIP-201ENST00000331456 CCDC129Q6ZRS4 1044 aa16.72■□□□□ 0.27
TRAIP-201ENST00000331456 SEC62Q99442 399 aaKnown RBP16.72■□□□□ 0.27
TRAIP-201ENST00000331456 LAMB2P55268 1798 aa16.71■□□□□ 0.27
TRAIP-201ENST00000331456 RPS6KA4O75676 772 aa16.71■□□□□ 0.27
TRAIP-201ENST00000331456 IGHMBP2P38935 993 aaKnown RBP16.71■□□□□ 0.27
TRAIP-201ENST00000331456 BLOC1S2Q6QNY1 142 aa16.71■□□□□ 0.27
TRAIP-201ENST00000331456 SH2B1Q9NRF2 756 aaPredicted RBP16.71■□□□□ 0.27
TRAIP-201ENST00000331456 CCNL1Q9UK58 526 aaPredicted RBP16.71■□□□□ 0.27
TRAIP-201ENST00000331456 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.71■□□□□ 0.27
TRAIP-201ENST00000331456 BAG4O95429 457 aaKnown RBP16.7■□□□□ 0.26
TRAIP-201ENST00000331456 UQCRFS1P1P0C7P4 283 aa16.7■□□□□ 0.26
TRAIP-201ENST00000331456 CPA1P15085 419 aa16.7■□□□□ 0.26
TRAIP-201ENST00000331456 KCNQ4P56696 695 aa16.7■□□□□ 0.26
TRAIP-201ENST00000331456 ANKRD1Q15327 319 aa16.7■□□□□ 0.26
TRAIP-201ENST00000331456 SKOR2Q2VWA4 1001 aaPredicted RBP16.7■□□□□ 0.26
TRAIP-201ENST00000331456 PTF1AQ7RTS3 328 aa16.7■□□□□ 0.26
TRAIP-201ENST00000331456 LPIN2Q92539 896 aa16.7■□□□□ 0.26
TRAIP-201ENST00000331456 DSCC1Q9BVC3 393 aa16.7■□□□□ 0.26
TRAIP-201ENST00000331456 ATRNO75882 1429 aa16.7■□□□□ 0.26
TRAIP-201ENST00000331456 DDX60Q8IY21 1712 aaKnown RBP16.7■□□□□ 0.26
TRAIP-201ENST00000331456 ONECUT3O60422 494 aaPredicted RBP16.7■□□□□ 0.26
TRAIP-201ENST00000331456 SLC5A1P13866 664 aa16.7■□□□□ 0.26
TRAIP-201ENST00000331456 ZAP70P43403 619 aa16.69■□□□□ 0.26
TRAIP-201ENST00000331456 TTF1Q15361 905 aaPredicted RBP16.69■□□□□ 0.26
TRAIP-201ENST00000331456 ZSCAN25Q6NSZ9 544 aa16.69■□□□□ 0.26
TRAIP-201ENST00000331456 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.69■□□□□ 0.26
TRAIP-201ENST00000331456 ALDH8A1Q9H2A2 487 aaPredicted RBP16.69■□□□□ 0.26
TRAIP-201ENST00000331456 NARFQ9UHQ1 456 aa16.69■□□□□ 0.26
TRAIP-201ENST00000331456 CHGBP05060 677 aa16.69■□□□□ 0.26
TRAIP-201ENST00000331456 RPS6KB1P23443 525 aa16.69■□□□□ 0.26
TRAIP-201ENST00000331456 FAM182BQ5T319 152 aa16.69■□□□□ 0.26
TRAIP-201ENST00000331456 ILDR2Q71H61 639 aa16.69■□□□□ 0.26
TRAIP-201ENST00000331456 CDC5LQ99459 802 aaKnown RBP16.69■□□□□ 0.26
TRAIP-201ENST00000331456 SEC31BQ9NQW1 1179 aa16.69■□□□□ 0.26
TRAIP-201ENST00000331456 MAST3O60307 1309 aa16.68■□□□□ 0.26
TRAIP-201ENST00000331456 GNPATO15228 680 aa16.68■□□□□ 0.26
TRAIP-201ENST00000331456 ZPR1O75312 459 aa16.68■□□□□ 0.26
TRAIP-201ENST00000331456 FGFR2P21802 821 aa16.68■□□□□ 0.26
TRAIP-201ENST00000331456 PKP1Q13835 747 aa16.68■□□□□ 0.26
TRAIP-201ENST00000331456 SCARF1Q14162 830 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms