RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 GLIPR1L2Q4G1C9 344 aa18.8■□□□□ 0.6
SYNM-201ENST00000328642 CCDC191Q8NCU4 936 aa18.8■□□□□ 0.6
SYNM-201ENST00000328642 GNPATO15228 680 aa18.79■□□□□ 0.6
SYNM-201ENST00000328642 ZNF589Q86UQ0 364 aaPredicted RBP18.79■□□□□ 0.6
SYNM-201ENST00000328642 HSP90AA4PQ58FG1 418 aa18.79■□□□□ 0.6
SYNM-201ENST00000328642 UTP14AQ9BVJ6 771 aaKnown RBP18.79■□□□□ 0.6
SYNM-201ENST00000328642 DIP2BQ9P265 1576 aa18.79■□□□□ 0.6
SYNM-201ENST00000328642 PREX1Q8TCU6 1659 aa18.79■□□□□ 0.6
SYNM-201ENST00000328642 PRDM1O75626 825 aa18.79■□□□□ 0.6
SYNM-201ENST00000328642 DZIP1Q86YF9 867 aaKnown RBP18.79■□□□□ 0.6
SYNM-201ENST00000328642 CCDC34Q96HJ3 373 aa18.79■□□□□ 0.6
SYNM-201ENST00000328642 MYL10Q9BUA6 226 aa18.79■□□□□ 0.6
SYNM-201ENST00000328642 PTCH1Q13635 1447 aa18.78■□□□□ 0.6
SYNM-201ENST00000328642 ADGRL3Q9HAR2 1447 aa18.78■□□□□ 0.6
SYNM-201ENST00000328642 USP5P45974 858 aa18.78■□□□□ 0.6
SYNM-201ENST00000328642 MAP3K11Q16584 847 aa18.78■□□□□ 0.6
SYNM-201ENST00000328642 PIGBQ92521 554 aa18.78■□□□□ 0.6
SYNM-201ENST00000328642 RNF113AO15541 343 aaKnown RBP18.78■□□□□ 0.6
SYNM-201ENST00000328642 F13A1P00488 732 aa18.78■□□□□ 0.6
SYNM-201ENST00000328642 HSPA4P34932 840 aa18.78■□□□□ 0.6
SYNM-201ENST00000328642 AK7Q96M32 723 aa18.78■□□□□ 0.6
SYNM-201ENST00000328642 SETDB2Q96T68 719 aa18.78■□□□□ 0.6
SYNM-201ENST00000328642 CFAP45Q9UL16 551 aa18.78■□□□□ 0.6
SYNM-201ENST00000328642 TCIRG1Q13488 830 aa18.78■□□□□ 0.6
SYNM-201ENST00000328642 CCDC152Q4G0S7 254 aa18.78■□□□□ 0.6
SYNM-201ENST00000328642 ZSCAN29Q8IWY8 852 aaPredicted RBP18.78■□□□□ 0.6
SYNM-201ENST00000328642 SLC12A7Q9Y666 1083 aa18.78■□□□□ 0.6
SYNM-201ENST00000328642 GOLGA8AA7E2F4 631 aa18.77■□□□□ 0.6
SYNM-201ENST00000328642 PRC1O43663 620 aa18.77■□□□□ 0.6
SYNM-201ENST00000328642 SLC26A6Q9BXS9 759 aa18.77■□□□□ 0.6
SYNM-201ENST00000328642 GREM2Q9H772 168 aa18.77■□□□□ 0.6
SYNM-201ENST00000328642 SLC4A4Q9Y6R1 1079 aa18.77■□□□□ 0.6
SYNM-201ENST00000328642 KDRP35968 1356 aa18.77■□□□□ 0.6
SYNM-201ENST00000328642 MARCKSP29966 332 aaPredicted RBP18.77■□□□□ 0.6
SYNM-201ENST00000328642 ANKRD18AQ8IVF6 992 aa18.77■□□□□ 0.6
SYNM-201ENST00000328642 DACT1Q9NYF0 836 aa18.77■□□□□ 0.59
SYNM-201ENST00000328642 TFCP2L1Q9NZI6 479 aa18.77■□□□□ 0.59
SYNM-201ENST00000328642 ZC3H13Q5T200 1668 aaKnown RBP18.77■□□□□ 0.59
SYNM-201ENST00000328642 ME3Q16798 604 aa18.76■□□□□ 0.59
SYNM-201ENST00000328642 CDC5LQ99459 802 aaKnown RBP18.76■□□□□ 0.59
SYNM-201ENST00000328642 NSFL1CQ9UNZ2 370 aaKnown RBP18.76■□□□□ 0.59
SYNM-201ENST00000328642 FSIP1Q8NA03 581 aa18.76■□□□□ 0.59
SYNM-201ENST00000328642 NCOA7Q8NI08 942 aa18.76■□□□□ 0.59
SYNM-201ENST00000328642 SPATA31A3Q5VYP0 1347 aa18.76■□□□□ 0.59
SYNM-201ENST00000328642 ERCC4Q92889 916 aaPredicted RBP18.75■□□□□ 0.59
SYNM-201ENST00000328642 VAT1LQ9HCJ6 419 aa18.75■□□□□ 0.59
SYNM-201ENST00000328642 WDR17Q8IZU2 1322 aa18.75■□□□□ 0.59
SYNM-201ENST00000328642 B4E1Z4 1266 aa18.75■□□□□ 0.59
SYNM-201ENST00000328642 CCDC183Q5T5S1 534 aa18.75■□□□□ 0.59
SYNM-201ENST00000328642 GAS2L3Q86XJ1 694 aa18.75■□□□□ 0.59
SYNM-201ENST00000328642 MKNK2Q9HBH9 465 aa18.75■□□□□ 0.59
SYNM-201ENST00000328642 TMEM131LA2VDJ0 1609 aa18.75■□□□□ 0.59
SYNM-201ENST00000328642 CRB1P82279 1406 aa18.75■□□□□ 0.59
SYNM-201ENST00000328642 PDE4CQ08493 712 aa18.75■□□□□ 0.59
SYNM-201ENST00000328642 HOMER1Q86YM7 354 aa18.75■□□□□ 0.59
SYNM-201ENST00000328642 KBTBD3Q8NAB2 608 aa18.75■□□□□ 0.59
SYNM-201ENST00000328642 OVOS2A0A0J9YW53 1432 aa18.75■□□□□ 0.59
SYNM-201ENST00000328642 OVOS2Q6IE36 1432 aa18.75■□□□□ 0.59
SYNM-201ENST00000328642 DHX8Q14562 1220 aaKnown RBP18.74■□□□□ 0.59
SYNM-201ENST00000328642 HLFQ16534 295 aa18.74■□□□□ 0.59
SYNM-201ENST00000328642 NLRP3Q96P20 1036 aa18.74■□□□□ 0.59
SYNM-201ENST00000328642 ARMT1Q9H993 441 aa18.74■□□□□ 0.59
SYNM-201ENST00000328642 SH3TC1Q8TE82 1336 aa18.74■□□□□ 0.59
SYNM-201ENST00000328642 DEPDC5O75140 1603 aa18.74■□□□□ 0.59
SYNM-201ENST00000328642 MCM5P33992 734 aa18.74■□□□□ 0.59
SYNM-201ENST00000328642 PTPN12Q05209 780 aaKnown RBP18.74■□□□□ 0.59
SYNM-201ENST00000328642 SCAND2PQ9GZW5 306 aaPredicted RBP18.74■□□□□ 0.59
SYNM-201ENST00000328642 MBD4O95243 580 aa18.74■□□□□ 0.59
SYNM-201ENST00000328642 METAP2P50579 478 aaKnown RBP eCLIP18.74■□□□□ 0.59
SYNM-201ENST00000328642 MFSD6Q6ZSS7 791 aa18.74■□□□□ 0.59
SYNM-201ENST00000328642 HMG20BQ9P0W2 317 aa18.74■□□□□ 0.59
SYNM-201ENST00000328642 MAP2P11137 1827 aaKnown RBP18.74■□□□□ 0.59
SYNM-201ENST00000328642 XBP1P17861 261 aa18.74■□□□□ 0.59
SYNM-201ENST00000328642 FAM177A1Q8N128 213 aaPredicted RBP18.74■□□□□ 0.59
SYNM-201ENST00000328642 IL25Q9H293 177 aa18.74■□□□□ 0.59
SYNM-201ENST00000328642 CCDC39Q9UFE4 941 aa18.74■□□□□ 0.59
SYNM-201ENST00000328642 hCG_1642624A0A1W2PR95 340 aa18.73■□□□□ 0.59
SYNM-201ENST00000328642 ERVV-2B6SEH9 535 aa18.73■□□□□ 0.59
SYNM-201ENST00000328642 PI4K2BQ8TCG2 481 aa18.73■□□□□ 0.59
SYNM-201ENST00000328642 SEC31BQ9NQW1 1179 aa18.73■□□□□ 0.59
SYNM-201ENST00000328642 PPLO60437 1756 aa18.73■□□□□ 0.59
SYNM-201ENST00000328642 USP31Q70CQ4 1352 aa18.73■□□□□ 0.59
SYNM-201ENST00000328642 GPAA1O43292 621 aa18.73■□□□□ 0.59
SYNM-201ENST00000328642 LARGE1O95461 756 aa18.73■□□□□ 0.59
SYNM-201ENST00000328642 PTPDC1A2A3K4 754 aa18.73■□□□□ 0.59
SYNM-201ENST00000328642 IARSP41252 1262 aaKnown RBP18.73■□□□□ 0.59
SYNM-201ENST00000328642 RPGRQ92834 1020 aaKnown RBP18.73■□□□□ 0.59
SYNM-201ENST00000328642 PCMTD1Q96MG8 357 aaPredicted RBP18.73■□□□□ 0.59
SYNM-201ENST00000328642 TPCN1Q9ULQ1 816 aa18.73■□□□□ 0.59
SYNM-201ENST00000328642 STX8Q9UNK0 236 aa18.73■□□□□ 0.59
SYNM-201ENST00000328642 IQSEC2Q5JU85 1478 aa18.72■□□□□ 0.59
SYNM-201ENST00000328642 HMGB1P09429 215 aaKnown RBP18.72■□□□□ 0.59
SYNM-201ENST00000328642 KLHL10Q6JEL2 608 aa18.72■□□□□ 0.59
SYNM-201ENST00000328642 CDC37L1Q7L3B6 337 aa18.72■□□□□ 0.59
SYNM-201ENST00000328642 DHX32Q7L7V1 743 aaKnown RBP18.72■□□□□ 0.59
SYNM-201ENST00000328642 CARD10Q9BWT7 1032 aa18.72■□□□□ 0.59
SYNM-201ENST00000328642 RBSNQ9H1K0 784 aa18.72■□□□□ 0.59
SYNM-201ENST00000328642 NBPF26B4DH59 902 aa18.71■□□□□ 0.59
SYNM-201ENST00000328642 UBE2HP62256 183 aa18.71■□□□□ 0.59
SYNM-201ENST00000328642 NBPF14Q5TI25 921 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms