RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 UTYO14607 1347 aa13.18□□□□□ -0.3
GINS3-202ENST00000328514 NCAPD2Q15021 1401 aa13.18□□□□□ -0.3
GINS3-202ENST00000328514 PIK3C2AO00443 1686 aa13.18□□□□□ -0.3
GINS3-202ENST00000328514 JAK2O60674 1132 aa13.17□□□□□ -0.3
GINS3-202ENST00000328514 CCDC73Q6ZRK6 1079 aa13.17□□□□□ -0.3
GINS3-202ENST00000328514 FILIP1Q7Z7B0 1213 aa13.17□□□□□ -0.3
GINS3-202ENST00000328514 PPP1R13BQ96KQ4 1090 aa13.17□□□□□ -0.3
GINS3-202ENST00000328514 DNAJC2Q99543 621 aaKnown RBP13.17□□□□□ -0.3
GINS3-202ENST00000328514 CHPF2Q9P2E5 772 aa13.17□□□□□ -0.3
GINS3-202ENST00000328514 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.17□□□□□ -0.3
GINS3-202ENST00000328514 TAF6LQ9Y6J9 622 aa13.17□□□□□ -0.3
GINS3-202ENST00000328514 V9GYY5 206 aaPredicted RBP13.17□□□□□ -0.3
GINS3-202ENST00000328514 NUTM2FA1L443 756 aa13.17□□□□□ -0.3
GINS3-202ENST00000328514 H3BQV1 296 aa13.17□□□□□ -0.3
GINS3-202ENST00000328514 KINO60870 393 aaKnown RBP13.17□□□□□ -0.3
GINS3-202ENST00000328514 SASH1O94885 1247 aa13.17□□□□□ -0.3
GINS3-202ENST00000328514 CLCN6P51797 869 aa13.17□□□□□ -0.3
GINS3-202ENST00000328514 IFFO2Q5TF58 517 aa13.17□□□□□ -0.3
GINS3-202ENST00000328514 NUTM2GQ5VZR2 741 aa13.17□□□□□ -0.3
GINS3-202ENST00000328514 EAF2Q96CJ1 260 aaPredicted RBP13.17□□□□□ -0.3
GINS3-202ENST00000328514 SRRTQ9BXP5 876 aaKnown RBP13.17□□□□□ -0.3
GINS3-202ENST00000328514 UBXN6Q9BZV1 441 aa13.17□□□□□ -0.3
GINS3-202ENST00000328514 GOLPH3LQ9H4A5 285 aa13.17□□□□□ -0.3
GINS3-202ENST00000328514 TRMT1Q9NXH9 659 aaKnown RBP13.17□□□□□ -0.3
GINS3-202ENST00000328514 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.17□□□□□ -0.3
GINS3-202ENST00000328514 PHLPP2Q6ZVD8 1323 aa13.16□□□□□ -0.3
GINS3-202ENST00000328514 CCP110O43303 1012 aa13.16□□□□□ -0.3
GINS3-202ENST00000328514 PFKFB2O60825 505 aa13.16□□□□□ -0.3
GINS3-202ENST00000328514 PNMA6AP0CW24 399 aaPredicted RBP13.16□□□□□ -0.3
GINS3-202ENST00000328514 HOXC9P31274 260 aa13.16□□□□□ -0.3
GINS3-202ENST00000328514 ERCC6LQ2NKX8 1250 aa13.16□□□□□ -0.3
GINS3-202ENST00000328514 TCEANC2Q96MN5 208 aa13.16□□□□□ -0.3
GINS3-202ENST00000328514 NEK1Q96PY6 1258 aa13.16□□□□□ -0.3
GINS3-202ENST00000328514 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.16□□□□□ -0.3
GINS3-202ENST00000328514 ABCC6O95255 1503 aa13.16□□□□□ -0.3
GINS3-202ENST00000328514 A0A1W2PQ27 194 aa13.15□□□□□ -0.3
GINS3-202ENST00000328514 A0A1W2PQ64 194 aa13.15□□□□□ -0.3
GINS3-202ENST00000328514 A0A1W2PQD8 194 aa13.15□□□□□ -0.3
GINS3-202ENST00000328514 ZNF396Q96N95 335 aaPredicted RBP13.15□□□□□ -0.3
GINS3-202ENST00000328514 FSD1Q9BTV5 496 aa13.15□□□□□ -0.3
GINS3-202ENST00000328514 TMEM2Q9UHN6 1383 aa13.15□□□□□ -0.3
GINS3-202ENST00000328514 PLA2G4AP47712 749 aa13.15□□□□□ -0.3
GINS3-202ENST00000328514 STK3Q13188 491 aa13.15□□□□□ -0.3
GINS3-202ENST00000328514 ZNF589Q86UQ0 364 aaPredicted RBP13.15□□□□□ -0.3
GINS3-202ENST00000328514 DBF4Q9UBU7 674 aaPredicted RBP13.15□□□□□ -0.3
GINS3-202ENST00000328514 NRDCO43847 1150 aa13.14□□□□□ -0.31
GINS3-202ENST00000328514 TPM1P09493 284 aa13.14□□□□□ -0.31
GINS3-202ENST00000328514 ETF1P62495 437 aaKnown RBP13.14□□□□□ -0.31
GINS3-202ENST00000328514 MUM1L1Q5H9M0 696 aa13.14□□□□□ -0.31
GINS3-202ENST00000328514 ARMCX5Q6P1M9 558 aa13.14□□□□□ -0.31
GINS3-202ENST00000328514 FMR1NBQ8N0W7 255 aaPredicted RBP13.14□□□□□ -0.31
GINS3-202ENST00000328514 AOPEPQ8N6M6 819 aa13.14□□□□□ -0.31
GINS3-202ENST00000328514 NSUN7Q8NE18 718 aaKnown RBP13.14□□□□□ -0.31
GINS3-202ENST00000328514 AGXT2Q9BYV1 514 aa13.14□□□□□ -0.31
GINS3-202ENST00000328514 ST7Q9NRC1 585 aa13.14□□□□□ -0.31
GINS3-202ENST00000328514 ARGLU1Q9NWB6 273 aaPredicted RBP13.14□□□□□ -0.31
GINS3-202ENST00000328514 C9orf78Q9NZ63 289 aaPredicted RBP13.14□□□□□ -0.31
GINS3-202ENST00000328514 PA2G4Q9UQ80 394 aaKnown RBP13.14□□□□□ -0.31
GINS3-202ENST00000328514 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
GINS3-202ENST00000328514 MARF1Q9Y4F3 1742 aaKnown RBP13.14□□□□□ -0.31
GINS3-202ENST00000328514 SALL1Q9NSC2 1324 aa13.14□□□□□ -0.31
GINS3-202ENST00000328514 SOX12O15370 315 aa13.13□□□□□ -0.31
GINS3-202ENST00000328514 HMGB1P09429 215 aaKnown RBP13.13□□□□□ -0.31
GINS3-202ENST00000328514 EIF2S2P20042 333 aaKnown RBP13.13□□□□□ -0.31
GINS3-202ENST00000328514 CDK11BP21127 795 aaKnown RBP13.13□□□□□ -0.31
GINS3-202ENST00000328514 SFPQP23246 707 aaKnown RBP eCLIP13.13□□□□□ -0.31
GINS3-202ENST00000328514 SCRN1Q12765 414 aa13.13□□□□□ -0.31
GINS3-202ENST00000328514 G3BP1Q13283 466 aaKnown RBP eCLIP13.13□□□□□ -0.31
GINS3-202ENST00000328514 KSR2Q6VAB6 950 aa13.13□□□□□ -0.31
GINS3-202ENST00000328514 Q6ZUG5 572 aa13.13□□□□□ -0.31
GINS3-202ENST00000328514 USP28Q96RU2 1077 aa13.13□□□□□ -0.31
GINS3-202ENST00000328514 ORC3Q9UBD5 711 aaPredicted RBP13.13□□□□□ -0.31
GINS3-202ENST00000328514 CAPN2P17655 700 aa13.13□□□□□ -0.31
GINS3-202ENST00000328514 TPM4P67936 248 aa13.13□□□□□ -0.31
GINS3-202ENST00000328514 ARHGAP29Q52LW3 1261 aa13.13□□□□□ -0.31
GINS3-202ENST00000328514 ADALQ6DHV7 355 aa13.13□□□□□ -0.31
GINS3-202ENST00000328514 POTEAQ6S8J7 498 aa13.13□□□□□ -0.31
GINS3-202ENST00000328514 SYT10Q6XYQ8 523 aa13.13□□□□□ -0.31
GINS3-202ENST00000328514 TICAM2Q86XR7 235 aa13.13□□□□□ -0.31
GINS3-202ENST00000328514 CHMP4CQ96CF2 233 aa13.13□□□□□ -0.31
GINS3-202ENST00000328514 DDX11Q96FC9 970 aa13.13□□□□□ -0.31
GINS3-202ENST00000328514 KAZALD1Q96I82 304 aa13.13□□□□□ -0.31
GINS3-202ENST00000328514 COL15A1P39059 1388 aa13.12□□□□□ -0.31
GINS3-202ENST00000328514 HEG1Q9ULI3 1381 aa13.12□□□□□ -0.31
GINS3-202ENST00000328514 ZBTB22O15209 634 aa13.12□□□□□ -0.31
GINS3-202ENST00000328514 TEX35Q5T0J7 233 aa13.12□□□□□ -0.31
GINS3-202ENST00000328514 FSIP1Q8NA03 581 aa13.12□□□□□ -0.31
GINS3-202ENST00000328514 MRPS27Q92552 414 aaKnown RBP13.12□□□□□ -0.31
GINS3-202ENST00000328514 RTEL1Q9NZ71 1219 aa13.12□□□□□ -0.31
GINS3-202ENST00000328514 KIAA1468Q9P260 1216 aa13.12□□□□□ -0.31
GINS3-202ENST00000328514 PLEKHG1Q9ULL1 1385 aa13.12□□□□□ -0.31
GINS3-202ENST00000328514 NEDD4P46934 1319 aa13.12□□□□□ -0.31
GINS3-202ENST00000328514 OVOS2A0A0G2JMS6 1433 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 ERICH4A6NGS2 130 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 EFCAB8A8MWE9 144 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 TADA3O75528 432 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 ATP5JP18859 108 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 HNRNPH2P55795 449 aaKnown RBP13.11□□□□□ -0.31
GINS3-202ENST00000328514 TMCO3Q6UWJ1 677 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 FCHSD1Q86WN1 690 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms