RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 RASSF4Q9H2L5 321 aa14.9□□□□□ -0.02
CCDC60-201ENST00000327554 IFNKQ9P0W0 207 aa14.9□□□□□ -0.02
CCDC60-201ENST00000327554 ABCC6O95255 1503 aa14.9□□□□□ -0.02
CCDC60-201ENST00000327554 IGSF1Q8N6C5 1336 aa14.9□□□□□ -0.02
CCDC60-201ENST00000327554 CCDC158Q5M9N0 1113 aa14.9□□□□□ -0.02
CCDC60-201ENST00000327554 FBXW7Q969H0 707 aa14.9□□□□□ -0.02
CCDC60-201ENST00000327554 EFCC1Q9HA90 598 aa14.9□□□□□ -0.02
CCDC60-201ENST00000327554 GNAT3A8MTJ3 354 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 EFCAB8A8MWE9 144 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 TAF7Q15545 349 aaPredicted RBP14.89□□□□□ -0.03
CCDC60-201ENST00000327554 ZSCAN26Q16670 478 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 HOMER1Q86YM7 354 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 REXO1L1PQ8IX06 675 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 IL17REQ8NFR9 667 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 SMARCC2Q8TAQ2 1214 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 USP28Q96RU2 1077 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 EYA1Q99502 592 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 SRRTQ9BXP5 876 aaKnown RBP14.89□□□□□ -0.03
CCDC60-201ENST00000327554 HMG20BQ9P0W2 317 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 RSPH14Q9UHP6 348 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 LCMT1Q9UIC8 334 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 LAMA4Q16363 1823 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 SOX12O15370 315 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 SMC2O95347 1197 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 CC2D1AQ6P1N0 951 aaPredicted RBP14.89□□□□□ -0.03
CCDC60-201ENST00000327554 FSIP1Q8NA03 581 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 MNS1Q8NEH6 495 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 BPIFA3Q9BQP9 254 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 CARD6Q9BX69 1037 aa14.89□□□□□ -0.03
CCDC60-201ENST00000327554 MYO1CO00159 1063 aa14.88□□□□□ -0.03
CCDC60-201ENST00000327554 DPCR1Q3MIW9 517 aa14.88□□□□□ -0.03
CCDC60-201ENST00000327554 ZNF589Q86UQ0 364 aaPredicted RBP14.88□□□□□ -0.03
CCDC60-201ENST00000327554 AACSQ86V21 672 aa14.88□□□□□ -0.03
CCDC60-201ENST00000327554 DNAAF4Q8WXU2 420 aa14.88□□□□□ -0.03
CCDC60-201ENST00000327554 ATG3Q9NT62 314 aa14.88□□□□□ -0.03
CCDC60-201ENST00000327554 PA2G4Q9UQ80 394 aaKnown RBP14.88□□□□□ -0.03
CCDC60-201ENST00000327554 PARP3Q9Y6F1 533 aa14.88□□□□□ -0.03
CCDC60-201ENST00000327554 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.88□□□□□ -0.03
CCDC60-201ENST00000327554 TRIM66O15016 1216 aa14.88□□□□□ -0.03
CCDC60-201ENST00000327554 GPS2Q13227 327 aa14.88□□□□□ -0.03
CCDC60-201ENST00000327554 SMC1AQ14683 1233 aaKnown RBP14.88□□□□□ -0.03
CCDC60-201ENST00000327554 LRRFIP1Q32MZ4 808 aaKnown RBP14.88□□□□□ -0.03
CCDC60-201ENST00000327554 NAA16Q6N069 864 aaPredicted RBP14.88□□□□□ -0.03
CCDC60-201ENST00000327554 FMR1NBQ8N0W7 255 aaPredicted RBP14.88□□□□□ -0.03
CCDC60-201ENST00000327554 CCDC191Q8NCU4 936 aa14.88□□□□□ -0.03
CCDC60-201ENST00000327554 EPC1Q9H2F5 836 aa14.88□□□□□ -0.03
CCDC60-201ENST00000327554 USP6P35125 1406 aa14.87□□□□□ -0.03
CCDC60-201ENST00000327554 TPM1P09493 284 aa14.87□□□□□ -0.03
CCDC60-201ENST00000327554 NOP2P46087 812 aaKnown RBP14.87□□□□□ -0.03
CCDC60-201ENST00000327554 EVCP57679 992 aa14.87□□□□□ -0.03
CCDC60-201ENST00000327554 DHX8Q14562 1220 aaKnown RBP14.87□□□□□ -0.03
CCDC60-201ENST00000327554 BABAM1Q9NWV8 329 aa14.87□□□□□ -0.03
CCDC60-201ENST00000327554 ACEP12821 1306 aa14.87□□□□□ -0.03
CCDC60-201ENST00000327554 NEDD4P46934 1319 aa14.87□□□□□ -0.03
CCDC60-201ENST00000327554 FLT4P35916 1363 aa14.87□□□□□ -0.03
CCDC60-201ENST00000327554 NEO1Q92859 1461 aa14.87□□□□□ -0.03
CCDC60-201ENST00000327554 PI4KAP2A4QPH2 592 aa14.87□□□□□ -0.03
CCDC60-201ENST00000327554 URI1O94763 535 aaPredicted RBP14.87□□□□□ -0.03
CCDC60-201ENST00000327554 SCRN1Q12765 414 aa14.87□□□□□ -0.03
CCDC60-201ENST00000327554 USPL1Q5W0Q7 1092 aa14.87□□□□□ -0.03
CCDC60-201ENST00000327554 CERS3Q8IU89 383 aa14.87□□□□□ -0.03
CCDC60-201ENST00000327554 ERC1Q8IUD2 1116 aa14.87□□□□□ -0.03
CCDC60-201ENST00000327554 PI4KAP1Q8N8J0 262 aa14.87□□□□□ -0.03
CCDC60-201ENST00000327554 SBNO1A3KN83 1393 aa14.87□□□□□ -0.03
CCDC60-201ENST00000327554 TECPR2O15040 1411 aa14.86□□□□□ -0.03
CCDC60-201ENST00000327554 NUTM2FA1L443 756 aa14.86□□□□□ -0.03
CCDC60-201ENST00000327554 CCP110O43303 1012 aa14.86□□□□□ -0.03
CCDC60-201ENST00000327554 NRDCO43847 1150 aa14.86□□□□□ -0.03
CCDC60-201ENST00000327554 IRX3P78415 501 aaPredicted RBP14.86□□□□□ -0.03
CCDC60-201ENST00000327554 NCAPHQ15003 741 aa14.86□□□□□ -0.03
CCDC60-201ENST00000327554 NUTM2GQ5VZR2 741 aa14.86□□□□□ -0.03
CCDC60-201ENST00000327554 Q6ZUG5 572 aa14.86□□□□□ -0.03
CCDC60-201ENST00000327554 TAF5LO75529 589 aa14.86□□□□□ -0.03
CCDC60-201ENST00000327554 C10orf67Q8IYJ2 551 aa14.86□□□□□ -0.03
CCDC60-201ENST00000327554 EAF2Q96CJ1 260 aaPredicted RBP14.86□□□□□ -0.03
CCDC60-201ENST00000327554 CCDC34Q96HJ3 373 aa14.86□□□□□ -0.03
CCDC60-201ENST00000327554 FSD1Q9BTV5 496 aa14.86□□□□□ -0.03
CCDC60-201ENST00000327554 COL15A1P39059 1388 aa14.86□□□□□ -0.03
CCDC60-201ENST00000327554 FOSBP53539 338 aa14.85□□□□□ -0.03
CCDC60-201ENST00000327554 PSME1Q06323 249 aa14.85□□□□□ -0.03
CCDC60-201ENST00000327554 TAF7LQ5H9L4 462 aa14.85□□□□□ -0.03
CCDC60-201ENST00000327554 ATL3Q6DD88 541 aa14.85□□□□□ -0.03
CCDC60-201ENST00000327554 NSUN7Q8NE18 718 aaKnown RBP14.85□□□□□ -0.03
CCDC60-201ENST00000327554 FBXO18Q8NFZ0 1043 aa14.85□□□□□ -0.03
CCDC60-201ENST00000327554 NEK1Q96PY6 1258 aa14.85□□□□□ -0.03
CCDC60-201ENST00000327554 PSD3Q9NYI0 1048 aa14.85□□□□□ -0.03
CCDC60-201ENST00000327554 KIAA1468Q9P260 1216 aa14.85□□□□□ -0.03
CCDC60-201ENST00000327554 SASH1O94885 1247 aa14.85□□□□□ -0.03
CCDC60-201ENST00000327554 HSP90B1P14625 803 aaKnown RBP14.85□□□□□ -0.03
CCDC60-201ENST00000327554 TNNT3P45378 269 aaPredicted RBP14.85□□□□□ -0.03
CCDC60-201ENST00000327554 ME1P48163 572 aa14.85□□□□□ -0.03
CCDC60-201ENST00000327554 KRT32Q14532 448 aa14.85□□□□□ -0.03
CCDC60-201ENST00000327554 ILDR1Q86SU0 546 aaPredicted RBP14.85□□□□□ -0.03
CCDC60-201ENST00000327554 GOLGA5Q8TBA6 731 aa14.85□□□□□ -0.03
CCDC60-201ENST00000327554 MRPS27Q92552 414 aaKnown RBP14.85□□□□□ -0.03
CCDC60-201ENST00000327554 EXOC4Q96A65 974 aa14.85□□□□□ -0.03
CCDC60-201ENST00000327554 SIRT1Q96EB6 747 aa14.85□□□□□ -0.03
CCDC60-201ENST00000327554 LLPHQ9BRT6 129 aaKnown RBP14.85□□□□□ -0.03
CCDC60-201ENST00000327554 FUT8Q9BYC5 575 aa14.85□□□□□ -0.03
CCDC60-201ENST00000327554 TMX1Q9H3N1 280 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms