RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 JARID2Q92833 1246 aaPredicted RBP18.68■□□□□ 0.58
SMAD3-201ENST00000327367 GNAT3A8MTJ3 354 aa18.68■□□□□ 0.58
SMAD3-201ENST00000327367 VAV2P52735 878 aa18.68■□□□□ 0.58
SMAD3-201ENST00000327367 UAP1Q16222 522 aaPredicted RBP18.68■□□□□ 0.58
SMAD3-201ENST00000327367 SREK1Q8WXA9 508 aaKnown RBP18.68■□□□□ 0.58
SMAD3-201ENST00000327367 KLF18A0A0U1RQI7 1052 aa18.67■□□□□ 0.58
SMAD3-201ENST00000327367 LONRF3Q496Y0 759 aa18.67■□□□□ 0.58
SMAD3-201ENST00000327367 B4GALNT4Q76KP1 1039 aa18.67■□□□□ 0.58
SMAD3-201ENST00000327367 LRRC9Q6ZRR7 1453 aa18.67■□□□□ 0.58
SMAD3-201ENST00000327367 GCKP35557 465 aa18.67■□□□□ 0.58
SMAD3-201ENST00000327367 PEX19P40855 299 aa18.67■□□□□ 0.58
SMAD3-201ENST00000327367 DZIP1Q86YF9 867 aaKnown RBP18.67■□□□□ 0.58
SMAD3-201ENST00000327367 GBP7Q8N8V2 638 aaPredicted RBP18.67■□□□□ 0.58
SMAD3-201ENST00000327367 GOLGA6CA6NDK9 693 aa18.67■□□□□ 0.58
SMAD3-201ENST00000327367 GOLGA6DP0CG33 693 aa18.67■□□□□ 0.58
SMAD3-201ENST00000327367 CRACR2BQ8N4Y2 399 aaPredicted RBP18.67■□□□□ 0.58
SMAD3-201ENST00000327367 GOLGA6AQ9NYA3 693 aa18.67■□□□□ 0.58
SMAD3-201ENST00000327367 AKAP2Q9Y2D5 859 aa18.67■□□□□ 0.58
SMAD3-201ENST00000327367 TTC36A6NLP5 189 aa18.67■□□□□ 0.58
SMAD3-201ENST00000327367 GBP1P32455 592 aa18.67■□□□□ 0.58
SMAD3-201ENST00000327367 ALDH1L2Q3SY69 923 aa18.67■□□□□ 0.58
SMAD3-201ENST00000327367 C16orf71Q8IYS4 520 aaPredicted RBP18.67■□□□□ 0.58
SMAD3-201ENST00000327367 ARHGEF2Q92974 986 aaKnown RBP18.66■□□□□ 0.58
SMAD3-201ENST00000327367 ALG1Q9BT22 464 aa18.66■□□□□ 0.58
SMAD3-201ENST00000327367 PLEKHA4Q9H4M7 779 aa18.66■□□□□ 0.58
SMAD3-201ENST00000327367 KRT83P78385 493 aa18.66■□□□□ 0.58
SMAD3-201ENST00000327367 NEDD9Q14511 834 aa18.66■□□□□ 0.58
SMAD3-201ENST00000327367 GPIHBP1Q8IV16 184 aa18.66■□□□□ 0.58
SMAD3-201ENST00000327367 LUC7L2Q9Y383 392 aaKnown RBP18.66■□□□□ 0.58
SMAD3-201ENST00000327367 FYCO1Q9BQS8 1478 aa18.66■□□□□ 0.58
SMAD3-201ENST00000327367 TXNDC9O14530 226 aa18.66■□□□□ 0.58
SMAD3-201ENST00000327367 PLCB3Q01970 1234 aa18.66■□□□□ 0.58
SMAD3-201ENST00000327367 HS1BP3Q53T59 392 aa18.66■□□□□ 0.58
SMAD3-201ENST00000327367 CCDC170Q8IYT3 715 aa18.66■□□□□ 0.58
SMAD3-201ENST00000327367 USHBP1Q8N6Y0 703 aa18.66■□□□□ 0.58
SMAD3-201ENST00000327367 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.66■□□□□ 0.582e-6■□□□□ 8.8
SMAD3-201ENST00000327367 SEC24BO95487 1268 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 ZNF131P52739 623 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 PSMD6Q15008 389 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 TTF1Q15361 905 aaPredicted RBP18.65■□□□□ 0.58
SMAD3-201ENST00000327367 PPP1R7Q15435 360 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 TRIM68Q6AZZ1 485 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 Q6ZUG5 572 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 CCDC42Q96M95 316 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 RMND1Q9NWS8 449 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 FAM184BQ9ULE4 1060 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 MYRIPQ8NFW9 859 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 SYNCQ9H7C4 482 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 NUCB1Q02818 461 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 TOM1L2Q6ZVM7 507 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 TRIM7Q9C029 511 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 IRX5P78411 483 aaPredicted RBP18.65■□□□□ 0.58
SMAD3-201ENST00000327367 CACNA2D3Q8IZS8 1091 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 STK38LQ9Y2H1 464 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 KIF21BO75037 1637 aa18.65■□□□□ 0.58
SMAD3-201ENST00000327367 GKAP1Q5VSY0 366 aaPredicted RBP18.64■□□□□ 0.57
SMAD3-201ENST00000327367 CUL5Q93034 780 aa18.64■□□□□ 0.57
SMAD3-201ENST00000327367 GDAP1L1Q96MZ0 367 aa18.64■□□□□ 0.57
SMAD3-201ENST00000327367 CCT6AP40227 531 aaKnown RBP18.64■□□□□ 0.57
SMAD3-201ENST00000327367 POTEDQ86YR6 584 aa18.64■□□□□ 0.57
SMAD3-201ENST00000327367 BAG1Q99933 345 aaPredicted RBP18.64■□□□□ 0.57
SMAD3-201ENST00000327367 CUX1P39880 1505 aa18.64■□□□□ 0.57
SMAD3-201ENST00000327367 MAP3K12Q12852 859 aa18.64■□□□□ 0.57
SMAD3-201ENST00000327367 PLIN2Q99541 437 aa18.64■□□□□ 0.57
SMAD3-201ENST00000327367 BAIAP2L1Q9UHR4 511 aa18.64■□□□□ 0.57
SMAD3-201ENST00000327367 MAP3K9P80192 1104 aa18.64■□□□□ 0.57
SMAD3-201ENST00000327367 NEK11Q8NG66 645 aa18.64■□□□□ 0.57
SMAD3-201ENST00000327367 SAMM50Q9Y512 469 aa18.64■□□□□ 0.57
SMAD3-201ENST00000327367 CCDC122Q5T0U0 273 aa18.63■□□□□ 0.57
SMAD3-201ENST00000327367 CHST3Q7LGC8 479 aa18.63■□□□□ 0.57
SMAD3-201ENST00000327367 BICD1Q96G01 975 aa18.63■□□□□ 0.57
SMAD3-201ENST00000327367 SWAP70Q9UH65 585 aa18.63■□□□□ 0.57
SMAD3-201ENST00000327367 CFAP157Q5JU67 520 aa18.63■□□□□ 0.57
SMAD3-201ENST00000327367 KCNG4Q8TDN1 519 aa18.63■□□□□ 0.57
SMAD3-201ENST00000327367 ZNF354CQ86Y25 554 aa18.63■□□□□ 0.57
SMAD3-201ENST00000327367 TPX2Q9ULW0 747 aaKnown RBP18.63■□□□□ 0.57
SMAD3-201ENST00000327367 ZNF853P0CG23 659 aa18.62■□□□□ 0.57
SMAD3-201ENST00000327367 UTP14CQ5TAP6 766 aaKnown RBP18.62■□□□□ 0.57
SMAD3-201ENST00000327367 ARFGAP2Q8N6H7 521 aa18.62■□□□□ 0.57
SMAD3-201ENST00000327367 ECHDC1Q9NTX5 307 aa18.62■□□□□ 0.57
SMAD3-201ENST00000327367 ASIC1P78348 528 aa18.62■□□□□ 0.57
SMAD3-201ENST00000327367 MICAL1Q8TDZ2 1067 aa18.62■□□□□ 0.57
SMAD3-201ENST00000327367 PCDHB15Q9Y5E8 787 aa18.62■□□□□ 0.57
SMAD3-201ENST00000327367 NDC80O14777 642 aa18.62■□□□□ 0.57
SMAD3-201ENST00000327367 GABPB1Q06547 395 aaPredicted RBP18.62■□□□□ 0.57
SMAD3-201ENST00000327367 LRCH2Q5VUJ6 765 aa18.62■□□□□ 0.57
SMAD3-201ENST00000327367 NCOA7Q8NI08 942 aa18.62■□□□□ 0.57
SMAD3-201ENST00000327367 DDX12PQ92771 950 aa18.62■□□□□ 0.57
SMAD3-201ENST00000327367 POLA1P09884 1462 aaPredicted RBP18.62■□□□□ 0.57
SMAD3-201ENST00000327367 FAM170AA1A519 330 aa18.62■□□□□ 0.57
SMAD3-201ENST00000327367 PTCD1O75127 700 aaKnown RBP18.62■□□□□ 0.57
SMAD3-201ENST00000327367 IFT74Q96LB3 600 aa18.62■□□□□ 0.57
SMAD3-201ENST00000327367 DPH6Q7L8W6 267 aa18.61■□□□□ 0.57
SMAD3-201ENST00000327367 DDX27Q96GQ7 796 aaKnown RBP18.61■□□□□ 0.57
SMAD3-201ENST00000327367 WDHD1O75717 1129 aaPredicted RBP18.61■□□□□ 0.57
SMAD3-201ENST00000327367 NCOA2Q15596 1464 aa18.61■□□□□ 0.57
SMAD3-201ENST00000327367 TRIM31Q9BZY9 425 aa18.61■□□□□ 0.57
SMAD3-201ENST00000327367 E7EVH7 732 aa18.61■□□□□ 0.57
SMAD3-201ENST00000327367 SF3B2Q13435 895 aaKnown RBP18.61■□□□□ 0.57
SMAD3-201ENST00000327367 AKNAD1Q5T1N1 836 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms