RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 ATP2B2Q01814 1243 aa11.02□□□□□ -0.65
COL12A1-201ENST00000322507 SLFN5Q08AF3 891 aa11.02□□□□□ -0.65
COL12A1-201ENST00000322507 OPTNQ96CV9 577 aa11.02□□□□□ -0.65
COL12A1-201ENST00000322507 FAF1Q9UNN5 650 aaPredicted RBP11.02□□□□□ -0.65
COL12A1-201ENST00000322507 SPAG1Q07617 926 aa11.02□□□□□ -0.65
COL12A1-201ENST00000322507 VGLL3A8MV65 326 aa11.02□□□□□ -0.65
COL12A1-201ENST00000322507 MATR3P43243 847 aaKnown RBP eCLIP11.02□□□□□ -0.65
COL12A1-201ENST00000322507 Q9H521 79 aa11.02□□□□□ -0.65
COL12A1-201ENST00000322507 SSBP05455 408 aaKnown RBP eCLIP11.02□□□□□ -0.65
COL12A1-201ENST00000322507 TMTC2Q8N394 836 aa11.02□□□□□ -0.65
COL12A1-201ENST00000322507 CFAP70Q5T0N1 1121 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 SLC12A7Q9Y666 1083 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 KLHDC4Q8TBB5 520 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 CREB3O43889 395 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 CYB5RLQ6IPT4 315 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 FAN1Q9Y2M0 1017 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 CETN3O15182 167 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 SLC5A1P13866 664 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 NUP88Q99567 741 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-201ENST00000322507 JADE2Q9NQC1 790 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 MORC4Q8TE76 937 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 PUS7Q96PZ0 661 aaKnown RBP11.01□□□□□ -0.65
COL12A1-201ENST00000322507 NUP160Q12769 1436 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL12A1-201ENST00000322507 CFAP43Q8NDM7 1665 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 CAMK4Q16566 473 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 RBM42Q9BTD8 480 aaKnown RBP11.01□□□□□ -0.65
COL12A1-201ENST00000322507 TPX2Q9ULW0 747 aaKnown RBP11.01□□□□□ -0.65
COL12A1-201ENST00000322507 ACTN2P35609 894 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 HVCN1Q96D96 273 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 ASXL1Q8IXJ9 1541 aa11.01□□□□□ -0.65
COL12A1-201ENST00000322507 ALDH3A1P30838 453 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 PDE4BQ07343 736 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 TSNARE1Q96NA8 513 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 XAB2Q9HCS7 855 aaKnown RBP11□□□□□ -0.65
COL12A1-201ENST00000322507 SYCE3A1L190 88 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 PROSER2Q86WR7 435 aaPredicted RBP11□□□□□ -0.65
COL12A1-201ENST00000322507 A0A1B0GW55 424 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 DUX4L2P0CJ85 424 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 DUX4L3P0CJ86 424 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 DUX4L4P0CJ87 422 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 DUX4L5P0CJ88 424 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 DUX4L6P0CJ89 424 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 DUX4L7P0CJ90 424 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 SPECC1Q5M775 1068 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 ERMNQ8TAM6 284 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 DUX4Q9UBX2 424 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 UNC13AQ9UPW8 1703 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 ERCC6LQ2NKX8 1250 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 ARFGAP2Q8N6H7 521 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 SPDL1Q96EA4 605 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 IKBKGQ9Y6K9 419 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 SOS1Q07889 1333 aaPredicted RBP11□□□□□ -0.65
COL12A1-201ENST00000322507 INPP5BP32019 993 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 COG7P83436 770 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 HS1BP3Q53T59 392 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 PRDM11Q9NQV5 511 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 NAIPQ13075 1403 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 CCDC194A0A1B0GVG4 234 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 SPECC1L-ADORA2AF8WAN1 911 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 BAG3O95817 575 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 IFIT5Q13325 482 aaKnown RBP11□□□□□ -0.65
COL12A1-201ENST00000322507 CABP1Q9NZU7 370 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 DBF4Q9UBU7 674 aaPredicted RBP11□□□□□ -0.65
COL12A1-201ENST00000322507 PAIP2BQ9ULR5 123 aaKnown RBP11□□□□□ -0.65
COL12A1-201ENST00000322507 ZGPATQ8N5A5 531 aaKnown RBP11□□□□□ -0.65
COL12A1-201ENST00000322507 STRN4Q9NRL3 753 aa11□□□□□ -0.65
COL12A1-201ENST00000322507 MAP3K21Q5TCX8 1036 aa10.99□□□□□ -0.65
COL12A1-201ENST00000322507 CTNNBL1Q8WYA6 563 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-201ENST00000322507 RASAL2Q9UJF2 1139 aa10.99□□□□□ -0.65
COL12A1-201ENST00000322507 ADGBQ8N7X0 1667 aa10.99□□□□□ -0.65
COL12A1-201ENST00000322507 SSRP1Q08945 709 aaKnown RBP10.99□□□□□ -0.65
COL12A1-201ENST00000322507 MKNK2Q9HBH9 465 aa10.99□□□□□ -0.65
COL12A1-201ENST00000322507 MAATS1Q7Z4T9 603 aa10.99□□□□□ -0.65
COL12A1-201ENST00000322507 PIK3R4Q99570 1358 aa10.99□□□□□ -0.65
COL12A1-201ENST00000322507 CNNM3Q8NE01 707 aa10.99□□□□□ -0.65
COL12A1-201ENST00000322507 ZNF644Q9H582 1327 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-201ENST00000322507 METTL24Q5JXM2 366 aa10.99□□□□□ -0.65
COL12A1-201ENST00000322507 TMEM57Q8N5G2 664 aa10.99□□□□□ -0.65
COL12A1-201ENST00000322507 SAMD1Q6SPF0 538 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-201ENST00000322507 RAP1GDS1P52306 607 aa10.99□□□□□ -0.65
COL12A1-201ENST00000322507 VEZTQ9HBM0 779 aa10.99□□□□□ -0.65
COL12A1-201ENST00000322507 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.99□□□□□ -0.65
COL12A1-201ENST00000322507 BCAP29Q9UHQ4 241 aa10.99□□□□□ -0.65
COL12A1-201ENST00000322507 ZNF213O14771 459 aa10.99□□□□□ -0.65
COL12A1-201ENST00000322507 ARHGEF9O43307 516 aa10.99□□□□□ -0.65
COL12A1-201ENST00000322507 BASP1P80723 227 aaKnown RBP10.99□□□□□ -0.65
COL12A1-201ENST00000322507 RNF10Q8N5U6 811 aaKnown RBP10.99□□□□□ -0.65
COL12A1-201ENST00000322507 RAB3IPQ96QF0 476 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-201ENST00000322507 RPRD2Q5VT52 1461 aaKnown RBP10.98□□□□□ -0.65
COL12A1-201ENST00000322507 SPDYE4A6NLX3 237 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 ANKRD24Q8TF21 1146 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 PIBF1Q8WXW3 757 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 LRRD1A4D1F6 860 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 E9PMD0 336 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 STK3Q13188 491 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 ANGPT1Q15389 498 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 TMEM132EQ6IEE7 984 aa10.98□□□□□ -0.65
COL12A1-201ENST00000322507 CCDC129Q6ZRS4 1044 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms