RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 RIMBP3CA6NJZ7 1639 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 RIMBP3BA6NNM3 1639 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 RIMBP3Q9UFD9 1639 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 IGKV5-2P06315 115 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 CCDC152Q4G0S7 254 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 ANTXR1Q9H6X2 564 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 MKNK2Q9HBH9 465 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 VAT1LQ9HCJ6 419 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 ADAMTS13Q76LX8 1427 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 ADGRB1O14514 1584 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 RAD50Q92878 1312 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 F13A1P00488 732 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 ADORA1P30542 326 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 HSP90AA2PQ14568 343 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-201ENST00000321105 ANKRD18AQ8IVF6 992 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 FSIP1Q8NA03 581 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 CCDC191Q8NCU4 936 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 CDC5LQ99459 802 aaKnown RBP12.88□□□□□ -0.35
TOP3A-201ENST00000321105 SLC4A4Q9Y6R1 1079 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 LMTK2Q8IWU2 1503 aa12.87□□□□□ -0.35
TOP3A-201ENST00000321105 PRC1O43663 620 aa12.87□□□□□ -0.35
TOP3A-201ENST00000321105 SASH1O94885 1247 aa12.87□□□□□ -0.35
TOP3A-201ENST00000321105 KLHL10Q6JEL2 608 aa12.87□□□□□ -0.35
TOP3A-201ENST00000321105 CCDC39Q9UFE4 941 aa12.87□□□□□ -0.35
TOP3A-201ENST00000321105 RNF113AO15541 343 aaKnown RBP12.87□□□□□ -0.35
TOP3A-201ENST00000321105 ZNF589Q86UQ0 364 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-201ENST00000321105 NCOA7Q8NI08 942 aa12.87□□□□□ -0.35
TOP3A-201ENST00000321105 SCAND2PQ9GZW5 306 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-201ENST00000321105 STX8Q9UNK0 236 aa12.87□□□□□ -0.35
TOP3A-201ENST00000321105 CAMSAP1Q5T5Y3 1602 aa12.87□□□□□ -0.35
TOP3A-201ENST00000321105 CCDC183Q5T5S1 534 aa12.87□□□□□ -0.35
TOP3A-201ENST00000321105 ERCC4Q92889 916 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-201ENST00000321105 PIK3C2BO00750 1634 aa12.86□□□□□ -0.35
TOP3A-201ENST00000321105 PTPRUQ92729 1446 aa12.86□□□□□ -0.35
TOP3A-201ENST00000321105 CLTCQ00610 1675 aaKnown RBP12.86□□□□□ -0.35
TOP3A-201ENST00000321105 METAP2P50579 478 aaKnown RBP eCLIP12.86□□□□□ -0.35
TOP3A-201ENST00000321105 TFCP2L1Q9NZI6 479 aa12.86□□□□□ -0.35
TOP3A-201ENST00000321105 MCM5P33992 734 aa12.86□□□□□ -0.35
TOP3A-201ENST00000321105 HSPA4P34932 840 aa12.86□□□□□ -0.35
TOP3A-201ENST00000321105 MFSD6Q6ZSS7 791 aa12.86□□□□□ -0.35
TOP3A-201ENST00000321105 NLRP3Q96P20 1036 aa12.86□□□□□ -0.35
TOP3A-201ENST00000321105 B4E1Z4 1266 aa12.86□□□□□ -0.35
TOP3A-201ENST00000321105 TCIRG1Q13488 830 aa12.86□□□□□ -0.35
TOP3A-201ENST00000321105 GREM2Q9H772 168 aa12.86□□□□□ -0.35
TOP3A-201ENST00000321105 BRMS1Q9HCU9 246 aa12.86□□□□□ -0.35
TOP3A-201ENST00000321105 IARSP41252 1262 aaKnown RBP12.85□□□□□ -0.35
TOP3A-201ENST00000321105 ME3Q16798 604 aa12.85□□□□□ -0.35
TOP3A-201ENST00000321105 RPGRQ92834 1020 aaKnown RBP12.85□□□□□ -0.35
TOP3A-201ENST00000321105 FRMPD1Q5SYB0 1578 aa12.85□□□□□ -0.35
TOP3A-201ENST00000321105 hCG_1642624A0A1W2PR95 340 aa12.85□□□□□ -0.35
TOP3A-201ENST00000321105 MBD4O95243 580 aa12.85□□□□□ -0.35
TOP3A-201ENST00000321105 SERPINC1P01008 464 aa12.85□□□□□ -0.35
TOP3A-201ENST00000321105 SLC3A2P08195 630 aaKnown RBP12.85□□□□□ -0.35
TOP3A-201ENST00000321105 HMGB1P09429 215 aaKnown RBP12.85□□□□□ -0.35
TOP3A-201ENST00000321105 PIGBQ92521 554 aa12.85□□□□□ -0.35
TOP3A-201ENST00000321105 HMG20BQ9P0W2 317 aa12.85□□□□□ -0.35
TOP3A-201ENST00000321105 SH3TC1Q8TE82 1336 aa12.85□□□□□ -0.35
TOP3A-201ENST00000321105 OLFM4Q6UX06 510 aa12.85□□□□□ -0.35
TOP3A-201ENST00000321105 ARMT1Q9H993 441 aa12.85□□□□□ -0.35
TOP3A-201ENST00000321105 MPHOSPH10O00566 681 aaKnown RBP12.84□□□□□ -0.35
TOP3A-201ENST00000321105 KBTBD3Q8NAB2 608 aa12.84□□□□□ -0.35
TOP3A-201ENST00000321105 PTPDC1A2A3K4 754 aa12.84□□□□□ -0.35
TOP3A-201ENST00000321105 UBE2HP62256 183 aa12.84□□□□□ -0.35
TOP3A-201ENST00000321105 GAS2L3Q86XJ1 694 aa12.84□□□□□ -0.35
TOP3A-201ENST00000321105 GPAA1O43292 621 aa12.84□□□□□ -0.35
TOP3A-201ENST00000321105 DHX32Q7L7V1 743 aaKnown RBP12.84□□□□□ -0.35
TOP3A-201ENST00000321105 TRMT1LQ7Z2T5 733 aaKnown RBP12.84□□□□□ -0.35
TOP3A-201ENST00000321105 KDRP35968 1356 aa12.84□□□□□ -0.35
TOP3A-201ENST00000321105 TSPY2A6NKD2 308 aa12.83□□□□□ -0.35
TOP3A-201ENST00000321105 NAT10Q9H0A0 1025 aaKnown RBP12.83□□□□□ -0.35
TOP3A-201ENST00000321105 LETM1O95202 739 aaPredicted RBP12.83□□□□□ -0.36
TOP3A-201ENST00000321105 ADCY5O95622 1261 aa12.83□□□□□ -0.36
TOP3A-201ENST00000321105 CDC37L1Q7L3B6 337 aa12.83□□□□□ -0.36
TOP3A-201ENST00000321105 CCAR1Q8IX12 1150 aaKnown RBP12.83□□□□□ -0.36
TOP3A-201ENST00000321105 ZNF622Q969S3 477 aaKnown RBP eCLIP12.83□□□□□ -0.36
TOP3A-201ENST00000321105 MYO3AQ8NEV4 1616 aa12.83□□□□□ -0.36
TOP3A-201ENST00000321105 CDKL5O76039 1030 aa12.83□□□□□ -0.36
TOP3A-201ENST00000321105 ZNF165P49910 485 aa12.83□□□□□ -0.36
TOP3A-201ENST00000321105 HMGN5P82970 282 aaKnown RBP12.83□□□□□ -0.36
TOP3A-201ENST00000321105 IQCA1Q86XH1 822 aa12.83□□□□□ -0.36
TOP3A-201ENST00000321105 CMTR1Q8N1G2 835 aaKnown RBP12.83□□□□□ -0.36
TOP3A-201ENST00000321105 RBSNQ9H1K0 784 aa12.83□□□□□ -0.36
TOP3A-201ENST00000321105 TTC12Q9H892 705 aaPredicted RBP12.83□□□□□ -0.36
TOP3A-201ENST00000321105 SEC31BQ9NQW1 1179 aa12.83□□□□□ -0.36
TOP3A-201ENST00000321105 RIMBP2O15034 1052 aa12.83□□□□□ -0.36
TOP3A-201ENST00000321105 SSBP05455 408 aaKnown RBP eCLIP12.83□□□□□ -0.36
TOP3A-201ENST00000321105 JMYQ8N9B5 988 aa12.83□□□□□ -0.36
TOP3A-201ENST00000321105 ZHX3Q9H4I2 956 aa12.83□□□□□ -0.36
TOP3A-201ENST00000321105 TPCN1Q9ULQ1 816 aa12.83□□□□□ -0.36
TOP3A-201ENST00000321105 WDR17Q8IZU2 1322 aa12.82□□□□□ -0.36
TOP3A-201ENST00000321105 PTPN12Q05209 780 aaKnown RBP12.82□□□□□ -0.36
TOP3A-201ENST00000321105 HLFQ16534 295 aa12.82□□□□□ -0.36
TOP3A-201ENST00000321105 NOC3LQ8WTT2 800 aaKnown RBP12.82□□□□□ -0.36
TOP3A-201ENST00000321105 ALG1Q9BT22 464 aa12.82□□□□□ -0.36
TOP3A-201ENST00000321105 HOOK1Q9UJC3 728 aaKnown RBP12.82□□□□□ -0.36
TOP3A-201ENST00000321105 ZBTB43O43298 467 aa12.82□□□□□ -0.36
TOP3A-201ENST00000321105 RPS6KB1P23443 525 aa12.82□□□□□ -0.36
TOP3A-201ENST00000321105 ZSCAN30Q86W11 494 aa12.82□□□□□ -0.36
TOP3A-201ENST00000321105 ADGRL3Q9HAR2 1447 aa12.82□□□□□ -0.36
TOP3A-201ENST00000321105 TMEM63CQ9P1W3 806 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms