RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 RNF20Q5VTR2 975 aa20.42■□□□□ 0.86
SSR4-201ENST00000320857 INTS4Q96HW7 963 aaKnown RBP20.42■□□□□ 0.86
SSR4-201ENST00000320857 GREM2Q9H772 168 aa20.42■□□□□ 0.86
SSR4-201ENST00000320857 PAG1Q9NWQ8 432 aa20.42■□□□□ 0.86
SSR4-201ENST00000320857 BCORQ6W2J9 1755 aa20.42■□□□□ 0.86
SSR4-201ENST00000320857 HSP90B1P14625 803 aaKnown RBP20.42■□□□□ 0.86
SSR4-201ENST00000320857 GORABQ5T7V8 394 aa20.42■□□□□ 0.86
SSR4-201ENST00000320857 RC3H1Q5TC82 1133 aaKnown RBP20.42■□□□□ 0.86
SSR4-201ENST00000320857 UTP14AQ9BVJ6 771 aaKnown RBP20.42■□□□□ 0.86
SSR4-201ENST00000320857 SH3TC1Q8TE82 1336 aa20.41■□□□□ 0.86
SSR4-201ENST00000320857 CREB3L3Q68CJ9 461 aa20.41■□□□□ 0.86
SSR4-201ENST00000320857 LDHAL6AQ6ZMR3 332 aa20.41■□□□□ 0.86
SSR4-201ENST00000320857 DDX46Q7L014 1031 aaKnown RBP20.41■□□□□ 0.86
SSR4-201ENST00000320857 ZNF652Q9Y2D9 606 aa20.41■□□□□ 0.86
SSR4-201ENST00000320857 RIPOR2Q9Y4F9 1068 aa20.41■□□□□ 0.86
SSR4-201ENST00000320857 LY75O60449 1722 aa20.4■□□□□ 0.86
SSR4-201ENST00000320857 SSFA2P28290 1259 aa20.4■□□□□ 0.86
SSR4-201ENST00000320857 METTL24Q5JXM2 366 aa20.4■□□□□ 0.86
SSR4-201ENST00000320857 CLEC17AQ6ZS10 378 aa20.4■□□□□ 0.86
SSR4-201ENST00000320857 ZGPATQ8N5A5 531 aaKnown RBP20.4■□□□□ 0.86
SSR4-201ENST00000320857 TTC14Q96N46 770 aa20.4■□□□□ 0.86
SSR4-201ENST00000320857 CNNM1Q9NRU3 951 aa20.4■□□□□ 0.86
SSR4-201ENST00000320857 GOLIM4O00461 696 aa20.39■□□□□ 0.86
SSR4-201ENST00000320857 RGL2O15211 777 aa20.39■□□□□ 0.86
SSR4-201ENST00000320857 CASTP20810 708 aaKnown RBP20.39■□□□□ 0.86
SSR4-201ENST00000320857 PSMA5P28066 241 aa20.39■□□□□ 0.86
SSR4-201ENST00000320857 MCMDC2Q4G0Z9 681 aa20.39■□□□□ 0.86
SSR4-201ENST00000320857 TTC39AQ5SRH9 613 aa20.39■□□□□ 0.86
SSR4-201ENST00000320857 SUSD4Q5VX71 490 aa20.39■□□□□ 0.86
SSR4-201ENST00000320857 CLEC4GQ6UXB4 293 aa20.39■□□□□ 0.86
SSR4-201ENST00000320857 XAGE2Q96GT9 111 aa20.39■□□□□ 0.86
SSR4-201ENST00000320857 JAKMIP1Q96N16 626 aaKnown RBP20.39■□□□□ 0.86
SSR4-201ENST00000320857 BCL11BQ9C0K0 894 aaPredicted RBP20.39■□□□□ 0.86
SSR4-201ENST00000320857 HMG20BQ9P0W2 317 aa20.39■□□□□ 0.86
SSR4-201ENST00000320857 CYP46A1Q9Y6A2 500 aa20.39■□□□□ 0.86
SSR4-201ENST00000320857 NDUFB9Q9Y6M9 179 aa20.39■□□□□ 0.86
SSR4-201ENST00000320857 SLC27A2O14975 620 aa20.38■□□□□ 0.85
SSR4-201ENST00000320857 TAF5LO75529 589 aa20.38■□□□□ 0.85
SSR4-201ENST00000320857 APBA3O96018 575 aa20.38■□□□□ 0.85
SSR4-201ENST00000320857 LRRFIP1Q32MZ4 808 aaKnown RBP20.38■□□□□ 0.85
SSR4-201ENST00000320857 NOL8Q76FK4 1167 aaKnown RBP20.38■□□□□ 0.85
SSR4-201ENST00000320857 ZSWIM6Q9HCJ5 1215 aa20.38■□□□□ 0.85
SSR4-201ENST00000320857 HELLSQ9NRZ9 838 aa20.38■□□□□ 0.85
SSR4-201ENST00000320857 SPEF2Q9C093 1822 aa20.38■□□□□ 0.85
SSR4-201ENST00000320857 RIC1Q4ADV7 1423 aa20.38■□□□□ 0.85
SSR4-201ENST00000320857 ABCC12Q96J65 1359 aa20.38■□□□□ 0.85
SSR4-201ENST00000320857 CYP2E1P05181 493 aaPredicted RBP20.38■□□□□ 0.85
SSR4-201ENST00000320857 KCNQ4P56696 695 aa20.38■□□□□ 0.85
SSR4-201ENST00000320857 ATP2B3Q16720 1220 aa20.38■□□□□ 0.85
SSR4-201ENST00000320857 VPS53Q5VIR6 699 aa20.38■□□□□ 0.85
SSR4-201ENST00000320857 ZNF589Q86UQ0 364 aaPredicted RBP20.38■□□□□ 0.85
SSR4-201ENST00000320857 GOLGA6L22H0YM25 854 aa20.37■□□□□ 0.85
SSR4-201ENST00000320857 SF3B2Q13435 895 aaKnown RBP20.37■□□□□ 0.85
SSR4-201ENST00000320857 PDRG1Q9NUG6 133 aa20.37■□□□□ 0.85
SSR4-201ENST00000320857 CCNL1Q9UK58 526 aaPredicted RBP20.37■□□□□ 0.85
SSR4-201ENST00000320857 LIMCH1Q9UPQ0 1083 aa20.37■□□□□ 0.85
SSR4-201ENST00000320857 RPS6KA4O75676 772 aa20.36■□□□□ 0.85
SSR4-201ENST00000320857 AK2P54819 239 aa20.36■□□□□ 0.85
SSR4-201ENST00000320857 NIP7Q9Y221 180 aaKnown RBP eCLIP20.36■□□□□ 0.85
SSR4-201ENST00000320857 U3KPZ7 1027 aaPredicted RBP20.36■□□□□ 0.85
SSR4-201ENST00000320857 ADORA1P30542 326 aa20.35■□□□□ 0.85
SSR4-201ENST00000320857 USPL1Q5W0Q7 1092 aa20.35■□□□□ 0.85
SSR4-201ENST00000320857 RUFY3Q7L099 469 aa20.35■□□□□ 0.85
SSR4-201ENST00000320857 TAF1LQ8IZX4 1826 aa20.35■□□□□ 0.85
SSR4-201ENST00000320857 TRAK2O60296 914 aa20.35■□□□□ 0.85
SSR4-201ENST00000320857 NTSR2O95665 410 aa20.35■□□□□ 0.85
SSR4-201ENST00000320857 KRT32Q14532 448 aa20.35■□□□□ 0.85
SSR4-201ENST00000320857 TSGA10IPQ3SY00 556 aa20.35■□□□□ 0.85
SSR4-201ENST00000320857 UPF1Q92900 1129 aaKnown RBP eCLIP20.35■□□□□ 0.85
SSR4-201ENST00000320857 SCN7AQ01118 1682 aa20.34■□□□□ 0.85
SSR4-201ENST00000320857 RPAP1Q9BWH6 1393 aaPredicted RBP20.34■□□□□ 0.85
SSR4-201ENST00000320857 MROH5Q6ZUA9 1318 aa20.34■□□□□ 0.85
SSR4-201ENST00000320857 RNF113AO15541 343 aaKnown RBP20.34■□□□□ 0.85
SSR4-201ENST00000320857 HCLS1P14317 486 aaPredicted RBP20.34■□□□□ 0.85
SSR4-201ENST00000320857 ADCK5Q3MIX3 580 aa20.34■□□□□ 0.85
SSR4-201ENST00000320857 ZMYM1Q5SVZ6 1142 aa20.34■□□□□ 0.85
SSR4-201ENST00000320857 ZSCAN31Q96LW9 406 aaPredicted RBP20.34■□□□□ 0.85
SSR4-201ENST00000320857 LAMB2P55268 1798 aa20.33■□□□□ 0.85
SSR4-201ENST00000320857 FAM177BA6PVY3 158 aa20.33■□□□□ 0.85
SSR4-201ENST00000320857 BAG4O95429 457 aaKnown RBP20.33■□□□□ 0.85
SSR4-201ENST00000320857 SKOR2Q2VWA4 1001 aaPredicted RBP20.33■□□□□ 0.85
SSR4-201ENST00000320857 CCDC152Q4G0S7 254 aa20.33■□□□□ 0.85
SSR4-201ENST00000320857 VGLL2Q8N8G2 317 aa20.33■□□□□ 0.85
SSR4-201ENST00000320857 RTL9Q8NET4 1388 aa20.33■□□□□ 0.84
SSR4-201ENST00000320857 DDX60Q8IY21 1712 aaKnown RBP20.33■□□□□ 0.84
SSR4-201ENST00000320857 TNS1Q9HBL0 1735 aaKnown RBP20.33■□□□□ 0.84
SSR4-201ENST00000320857 LRP5O75197 1615 aa20.32■□□□□ 0.84
SSR4-201ENST00000320857 PDE8BO95263 885 aa20.32■□□□□ 0.84
SSR4-201ENST00000320857 FKBP4Q02790 459 aaKnown RBP eCLIP20.32■□□□□ 0.84
SSR4-201ENST00000320857 DEFB132Q7Z7B7 95 aa20.32■□□□□ 0.84
SSR4-201ENST00000320857 ZNF512BQ96KM6 892 aaPredicted RBP20.32■□□□□ 0.84
SSR4-201ENST00000320857 NARFQ9UHQ1 456 aa20.32■□□□□ 0.84
SSR4-201ENST00000320857 ZFYP08048 801 aaPredicted RBP20.32■□□□□ 0.84
SSR4-201ENST00000320857 BLOC1S2Q6QNY1 142 aa20.32■□□□□ 0.84
SSR4-201ENST00000320857 SEC62Q99442 399 aaKnown RBP20.32■□□□□ 0.84
SSR4-201ENST00000320857 SH2B1Q9NRF2 756 aaPredicted RBP20.32■□□□□ 0.84
SSR4-201ENST00000320857 CPA1P15085 419 aa20.31■□□□□ 0.84
SSR4-201ENST00000320857 EN1Q05925 392 aaPredicted RBP20.31■□□□□ 0.84
SSR4-201ENST00000320857 CCDC129Q6ZRS4 1044 aa20.31■□□□□ 0.84
SSR4-201ENST00000320857 DSCC1Q9BVC3 393 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms