RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 KCNQ4P56696 695 aa10.12□□□□□ -0.79
SSBP2-201ENST00000320672 EEF2P13639 858 aaKnown RBP10.12□□□□□ -0.79
SSBP2-201ENST00000320672 FCHSD1Q86WN1 690 aa10.12□□□□□ -0.79
SSBP2-201ENST00000320672 OTUD6BQ8N6M0 293 aa10.12□□□□□ -0.79
SSBP2-201ENST00000320672 KRT13P13646 458 aa10.12□□□□□ -0.79
SSBP2-201ENST00000320672 AK2P54819 239 aa10.12□□□□□ -0.79
SSBP2-201ENST00000320672 PPP4R3AQ6IN85 833 aa10.12□□□□□ -0.79
SSBP2-201ENST00000320672 IFT81Q8WYA0 676 aa10.12□□□□□ -0.79
SSBP2-201ENST00000320672 NCAPD3P42695 1498 aa10.12□□□□□ -0.79
SSBP2-201ENST00000320672 ASIC1P78348 528 aa10.12□□□□□ -0.79
SSBP2-201ENST00000320672 NAPAP54920 295 aa10.12□□□□□ -0.79
SSBP2-201ENST00000320672 TBC1D10BQ4KMP7 808 aaPredicted RBP10.12□□□□□ -0.79
SSBP2-201ENST00000320672 CABP5Q9NP86 173 aa10.12□□□□□ -0.79
SSBP2-201ENST00000320672 DMRT2Q9Y5R5 561 aa10.12□□□□□ -0.79
SSBP2-201ENST00000320672 AKR1B10O60218 316 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 SELENOSQ9BQE4 189 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 SLC52A1Q9NWF4 448 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 RSPH14Q9UHP6 348 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 PDE1AP54750 535 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 PPP2R5DQ14738 602 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 PTPRKQ15262 1439 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 UBAP1LF5GYI3 381 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 ZBTB43O43298 467 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 XRCC6P12956 609 aaKnown RBP eCLIP10.11□□□□□ -0.79
SSBP2-201ENST00000320672 ERCC5P28715 1186 aaPredicted RBP10.11□□□□□ -0.79
SSBP2-201ENST00000320672 PAFAH1B1P43034 410 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 TCP10Q12799 353 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 EIF4A2Q14240 407 aaKnown RBP10.11□□□□□ -0.79
SSBP2-201ENST00000320672 SYT10Q6XYQ8 523 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 TCP11L1Q9NUJ3 509 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 CCDC50Q8IVM0 306 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 MCM9Q9NXL9 1143 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 GUCA1BQ9UMX6 200 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 PPP1R12BO60237 982 aaPredicted RBP10.11□□□□□ -0.79
SSBP2-201ENST00000320672 CTDSPL2Q05D32 466 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 PPP2R5CQ13362 524 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 MSL1Q68DK7 614 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 ANKRD18AQ8IVF6 992 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 ARMT1Q9H993 441 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 ZSCAN22P10073 491 aaPredicted RBP10.11□□□□□ -0.79
SSBP2-201ENST00000320672 STAT6P42226 847 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 ZRSR2Q15696 482 aaKnown RBP10.11□□□□□ -0.79
SSBP2-201ENST00000320672 TAB3Q8N5C8 712 aaPredicted RBP10.11□□□□□ -0.79
SSBP2-201ENST00000320672 SMARCC1Q92922 1105 aaPredicted RBP10.11□□□□□ -0.79
SSBP2-201ENST00000320672 B4E1Z4 1266 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 RAB3GAP1Q15042 981 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 ZCRB1Q8TBF4 217 aaKnown RBP10.11□□□□□ -0.79
SSBP2-201ENST00000320672 HYPKQ9NX55 129 aa10.11□□□□□ -0.79
SSBP2-201ENST00000320672 U2AF2P26368 475 aaKnown RBP eCLIP10.1□□□□□ -0.79
SSBP2-201ENST00000320672 SCAND2PQ9GZW5 306 aaPredicted RBP10.1□□□□□ -0.79
SSBP2-201ENST00000320672 EXOC1Q9NV70 894 aa10.1□□□□□ -0.79
SSBP2-201ENST00000320672 MYCP01106 439 aaPredicted RBP10.1□□□□□ -0.79
SSBP2-201ENST00000320672 RAPGEF1Q13905 1077 aa10.1□□□□□ -0.79
SSBP2-201ENST00000320672 NAA16Q6N069 864 aaPredicted RBP10.1□□□□□ -0.79
SSBP2-201ENST00000320672 DZIP3Q86Y13 1208 aaKnown RBP10.1□□□□□ -0.79
SSBP2-201ENST00000320672 HOMER2Q9NSB8 354 aa10.1□□□□□ -0.79
SSBP2-201ENST00000320672 SHTN1A0MZ66 631 aa10.1□□□□□ -0.79
SSBP2-201ENST00000320672 BICC1Q9H694 974 aaKnown RBP10.1□□□□□ -0.79
SSBP2-201ENST00000320672 SYNCQ9H7C4 482 aa10.1□□□□□ -0.79
SSBP2-201ENST00000320672 A1BGP04217 495 aa10.1□□□□□ -0.79
SSBP2-201ENST00000320672 SKILP12757 684 aa10.1□□□□□ -0.79
SSBP2-201ENST00000320672 TRIM21P19474 475 aaKnown RBP10.1□□□□□ -0.79
SSBP2-201ENST00000320672 MRPL50Q8N5N7 158 aaKnown RBP10.1□□□□□ -0.79
SSBP2-201ENST00000320672 EZRP15311 586 aaKnown RBP10.1□□□□□ -0.79
SSBP2-201ENST00000320672 ESYT1Q9BSJ8 1104 aa10.1□□□□□ -0.79
SSBP2-201ENST00000320672 LGR6Q9HBX8 967 aa10.1□□□□□ -0.79
SSBP2-201ENST00000320672 DCAF17Q5H9S7 520 aaPredicted RBP10.1□□□□□ -0.79
SSBP2-201ENST00000320672 CCDC102BQ68D86 513 aa10.1□□□□□ -0.79
SSBP2-201ENST00000320672 ZSCAN12O43309 604 aa10.1□□□□□ -0.79
SSBP2-201ENST00000320672 GDAP1L1Q96MZ0 367 aa10.1□□□□□ -0.79
SSBP2-201ENST00000320672 SETDB2Q96T68 719 aa10.1□□□□□ -0.79
SSBP2-201ENST00000320672 SNAPC4Q5SXM2 1469 aa10.09□□□□□ -0.79
SSBP2-201ENST00000320672 POTEJP0CG39 1038 aa10.09□□□□□ -0.79
SSBP2-201ENST00000320672 RTN1Q16799 776 aa10.09□□□□□ -0.79
SSBP2-201ENST00000320672 CLSTN2Q9H4D0 955 aa10.09□□□□□ -0.79
SSBP2-201ENST00000320672 PLCB3Q01970 1234 aa10.09□□□□□ -0.79
SSBP2-201ENST00000320672 VPS16Q9H269 839 aa10.09□□□□□ -0.79
SSBP2-201ENST00000320672 KRT9P35527 623 aa10.09□□□□□ -0.79
SSBP2-201ENST00000320672 STX1AQ16623 288 aa10.09□□□□□ -0.79
SSBP2-201ENST00000320672 IFNKQ9P0W0 207 aa10.09□□□□□ -0.79
SSBP2-201ENST00000320672 USO1O60763 962 aaKnown RBP10.09□□□□□ -0.79
SSBP2-201ENST00000320672 SNRPA1P09661 255 aaKnown RBP10.09□□□□□ -0.79
SSBP2-201ENST00000320672 GIMAP7Q8NHV1 300 aa10.09□□□□□ -0.79
SSBP2-201ENST00000320672 CCDC63Q8NA47 563 aa10.09□□□□□ -0.79
SSBP2-201ENST00000320672 GTF3C6Q969F1 213 aa10.09□□□□□ -0.79
SSBP2-201ENST00000320672 FAM227BQ96M60 508 aa10.09□□□□□ -0.79
SSBP2-201ENST00000320672 HOOK3Q86VS8 718 aa10.09□□□□□ -0.79
SSBP2-201ENST00000320672 PLB1Q6P1J6 1458 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 UAP1Q16222 522 aaPredicted RBP10.08□□□□□ -0.8
SSBP2-201ENST00000320672 MAGEB6P1A0A0J9YX57 407 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 IRS4O14654 1257 aaPredicted RBP10.08□□□□□ -0.8
SSBP2-201ENST00000320672 AAMPQ13685 434 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 LETM2Q2VYF4 491 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 TBC1D32Q96NH3 1257 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 TRIM31Q9BZY9 425 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 ZNF569Q5MCW4 686 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 ZEB2O60315 1214 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 NUCB1Q02818 461 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 TTF1Q15361 905 aaPredicted RBP10.08□□□□□ -0.8
SSBP2-201ENST00000320672 TIAM1Q13009 1591 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms