RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 TWISTNBQ3B726 338 aaPredicted RBP4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 DDX54Q8TDD1 881 aaKnown RBP4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 CAMKK2Q96RR4 588 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 CCDC87Q9NVE4 849 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 ARFGEF1Q9Y6D6 1849 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 A0A1B0GUL6 1792 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 VAMP4O75379 141 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 NR1I2O75469 434 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 CYP19A1P11511 503 aaPredicted RBP4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 NBPF14Q5TI25 921 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 NFATC2IPQ8NCF5 419 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 ARAP2Q8WZ64 1704 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 NECTIN2Q92692 538 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 RTL9Q8NET4 1388 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 BRCA1P38398 1863 aaKnown RBP4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 ZBTB24O43167 697 aaPredicted RBP4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 ALDH1L1O75891 902 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 CSPP1Q1MSJ5 1256 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 PARP10Q53GL7 1025 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 MCM10Q7L590 875 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 LGR6Q9HBX8 967 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 KIAA1551Q9HCM1 1747 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 IGSF3O75054 1194 aa4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 TTC13Q8NBP0 860 aa4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 TESPA1A2RU30 521 aaPredicted RBP4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 ACTN4O43707 911 aaKnown RBP4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 CCT4P50991 539 aaKnown RBP4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 MYT1Q01538 1121 aa4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 GRIPAP1Q4V328 841 aa4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 PLBD2Q8NHP8 589 aa4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 UTYO14607 1347 aa4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 ABCC4O15439 1325 aa4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 CDHR2Q9BYE9 1310 aa4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 TTC24A2A3L6 582 aaPredicted RBP4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 EIF5P55010 431 aaKnown RBP4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 IFFO2Q5TF58 517 aa4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 SPRYD7Q5W111 196 aa4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 KIF6Q6ZMV9 814 aa4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 STK32BQ9NY57 414 aa4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 USP35Q9P2H5 1018 aa4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 CCNL1Q9UK58 526 aaPredicted RBP4.18□□□□□ -1.74
SCAMP1-201ENST00000320280 ADH1BP00325 375 aa4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 TXNRD1Q16881 649 aa4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 HDGFL1Q5TGJ6 251 aa4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 LRP10Q7Z4F1 713 aa4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 ZNF496Q96IT1 587 aaPredicted RBP4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 NYXQ9GZU5 481 aa4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 MAP3K15Q6ZN16 1313 aa4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 ATP6V1AP38606 617 aa4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 RARSP54136 660 aaKnown RBP4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 NARFQ9UHQ1 456 aa4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 RTCBQ9Y3I0 505 aaKnown RBP4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 EXOSC9Q06265 439 aaKnown RBP4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 TMC4Q7Z404 712 aa4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 PLA2G12BQ9BX93 195 aa4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 RCAN3Q9UKA8 241 aa4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 ANKRD31Q8N7Z5 1873 aa4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 CARMIL3Q8ND23 1372 aa4.17□□□□□ -1.74
SCAMP1-201ENST00000320280 SPEF2Q9C093 1822 aa4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 APBA3O96018 575 aa4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 ZKSCAN2Q63HK3 967 aa4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 INTS3Q68E01 1043 aaKnown RBP4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 INTS5Q6P9B9 1019 aaKnown RBP4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 KSR2Q6VAB6 950 aa4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 NPM2Q86SE8 214 aaKnown RBP4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 CCDC191Q8NCU4 936 aa4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 USP42Q9H9J4 1324 aaKnown RBP4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 CRKLP46109 303 aaKnown RBP4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 NEXNQ0ZGT2 675 aa4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 TRIM67Q6ZTA4 783 aa4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 NLGN1Q8N2Q7 840 aa4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 ASAP1Q9ULH1 1129 aa4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 V9GY48 417 aaPredicted RBP4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 PSME4Q14997 1843 aa4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 C10orf71Q711Q0 1435 aa4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 TRIM37O94972 964 aa4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 SLC15A2Q16348 729 aa4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 GIGYF2Q6Y7W6 1299 aaKnown RBP4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 TICAM2Q86XR7 235 aa4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 RRP7AQ9Y3A4 280 aaKnown RBP4.16□□□□□ -1.74
SCAMP1-201ENST00000320280 ATF7IPQ6VMQ6 1270 aa4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 LINC00116Q8NCU8 138 aa4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 LINS1Q8NG48 757 aa4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 METTL22Q9BUU2 404 aaPredicted RBP4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 DACH1Q9UI36 760 aa4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 DDX19BQ9UMR2 479 aa4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 C6orf229H3BNL8 230 aa4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 GNAI3P08754 354 aa4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 FLIIQ13045 1269 aa4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 TRAPPC3LQ5T215 181 aa4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 PPP1R42Q7Z4L9 355 aa4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 SULF1Q8IWU6 871 aa4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 CYP4X1Q8N118 509 aa4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 C8orf58Q8NAV2 365 aa4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 EMID1Q96A84 441 aaPredicted RBP4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 ISCA1Q9BUE6 129 aa4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 DAXXQ9UER7 740 aaPredicted RBP4.15□□□□□ -1.74
SCAMP1-201ENST00000320280 LTBP1Q14766 1721 aa4.15□□□□□ -1.75
SCAMP1-201ENST00000320280 NRG2O14511 850 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms