RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 KDM4AO75164 1064 aa18.42■□□□□ 0.54
SHROOM1-201ENST00000319854 PHF14O94880 888 aa18.42■□□□□ 0.54
SHROOM1-201ENST00000319854 LETM1O95202 739 aaPredicted RBP18.42■□□□□ 0.54
SHROOM1-201ENST00000319854 FOXO4P98177 505 aa18.42■□□□□ 0.54
SHROOM1-201ENST00000319854 HSP90AB3PQ58FF7 597 aa18.42■□□□□ 0.54
SHROOM1-201ENST00000319854 KIAA1524Q8TCG1 905 aa18.42■□□□□ 0.54
SHROOM1-201ENST00000319854 ZSWIM6Q9HCJ5 1215 aa18.42■□□□□ 0.54
SHROOM1-201ENST00000319854 ZSCAN22P10073 491 aaPredicted RBP18.42■□□□□ 0.54
SHROOM1-201ENST00000319854 FKBP4Q02790 459 aaKnown RBP eCLIP18.42■□□□□ 0.54
SHROOM1-201ENST00000319854 DNM1Q05193 864 aaKnown RBP18.41■□□□□ 0.54
SHROOM1-201ENST00000319854 SCN11AQ9UI33 1791 aa18.41■□□□□ 0.54
SHROOM1-201ENST00000319854 HIP1O00291 1037 aa18.41■□□□□ 0.54
SHROOM1-201ENST00000319854 VPS53Q5VIR6 699 aa18.41■□□□□ 0.54
SHROOM1-201ENST00000319854 SPC24Q8NBT2 197 aa18.41■□□□□ 0.54
SHROOM1-201ENST00000319854 ANKRD7Q92527 254 aa18.41■□□□□ 0.54
SHROOM1-201ENST00000319854 HSP90B1P14625 803 aaKnown RBP18.4■□□□□ 0.54
SHROOM1-201ENST00000319854 CASP7P55210 303 aa18.4■□□□□ 0.54
SHROOM1-201ENST00000319854 ST3GAL1Q11201 340 aa18.4■□□□□ 0.54
SHROOM1-201ENST00000319854 GORABQ5T7V8 394 aa18.4■□□□□ 0.54
SHROOM1-201ENST00000319854 SIPA1L3O60292 1781 aaPredicted RBP18.4■□□□□ 0.54
SHROOM1-201ENST00000319854 TAF7LQ5H9L4 462 aa18.4■□□□□ 0.54
SHROOM1-201ENST00000319854 CCDC183Q5T5S1 534 aa18.4■□□□□ 0.54
SHROOM1-201ENST00000319854 A0A0G2JLW4 131 aa18.4■□□□□ 0.54
SHROOM1-201ENST00000319854 TAF5LO75529 589 aa18.4■□□□□ 0.54
SHROOM1-201ENST00000319854 ATP5JP18859 108 aa18.4■□□□□ 0.54
SHROOM1-201ENST00000319854 RNF20Q5VTR2 975 aa18.4■□□□□ 0.54
SHROOM1-201ENST00000319854 GIMAP6Q6P9H5 292 aa18.4■□□□□ 0.54
SHROOM1-201ENST00000319854 RABL6Q3YEC7 729 aaPredicted RBP18.39■□□□□ 0.53
SHROOM1-201ENST00000319854 LARP1BQ659C4 914 aaKnown RBP18.39■□□□□ 0.53
SHROOM1-201ENST00000319854 CHST3Q7LGC8 479 aa18.39■□□□□ 0.53
SHROOM1-201ENST00000319854 PIGBQ92521 554 aa18.39■□□□□ 0.53
SHROOM1-201ENST00000319854 DDX11Q96FC9 970 aa18.39■□□□□ 0.53
SHROOM1-201ENST00000319854 CPDO75976 1380 aa18.39■□□□□ 0.53
SHROOM1-201ENST00000319854 ERVV-2B6SEH9 535 aa18.38■□□□□ 0.53
SHROOM1-201ENST00000319854 H7C1W4 665 aa18.38■□□□□ 0.53
SHROOM1-201ENST00000319854 ATG9AQ7Z3C6 839 aa18.38■□□□□ 0.53
SHROOM1-201ENST00000319854 CARD10Q9BWT7 1032 aa18.38■□□□□ 0.53
SHROOM1-201ENST00000319854 COL15A1P39059 1388 aa18.38■□□□□ 0.53
SHROOM1-201ENST00000319854 DCCP43146 1447 aa18.38■□□□□ 0.53
SHROOM1-201ENST00000319854 COL18A1P39060 1754 aa18.38■□□□□ 0.53
SHROOM1-201ENST00000319854 F13A1P00488 732 aa18.38■□□□□ 0.53
SHROOM1-201ENST00000319854 BBXQ8WY36 941 aaPredicted RBP18.38■□□□□ 0.53
SHROOM1-201ENST00000319854 PSMA5P28066 241 aa18.37■□□□□ 0.53
SHROOM1-201ENST00000319854 A0A1B0GUL7 405 aa18.37■□□□□ 0.53
SHROOM1-201ENST00000319854 GTF2E1P29083 439 aaPredicted RBP18.37■□□□□ 0.53
SHROOM1-201ENST00000319854 CCDC57Q2TAC2 916 aa18.37■□□□□ 0.53
SHROOM1-201ENST00000319854 BCL11BQ9C0K0 894 aaPredicted RBP18.37■□□□□ 0.53
SHROOM1-201ENST00000319854 SOS2Q07890 1332 aaPredicted RBP18.37■□□□□ 0.53
SHROOM1-201ENST00000319854 EPB41L2O43491 1005 aaKnown RBP18.36■□□□□ 0.53
SHROOM1-201ENST00000319854 NAA30Q147X3 362 aaPredicted RBP18.36■□□□□ 0.53
SHROOM1-201ENST00000319854 PI16Q6UXB8 463 aa18.36■□□□□ 0.53
SHROOM1-201ENST00000319854 FUCA2Q9BTY2 467 aa18.36■□□□□ 0.53
SHROOM1-201ENST00000319854 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.36■□□□□ 0.53
SHROOM1-201ENST00000319854 CTIFO43310 598 aaKnown RBP18.36■□□□□ 0.53
SHROOM1-201ENST00000319854 IFIT1P09914 478 aaKnown RBP18.36■□□□□ 0.53
SHROOM1-201ENST00000319854 ADORA1P30542 326 aa18.36■□□□□ 0.53
SHROOM1-201ENST00000319854 PAG1Q9NWQ8 432 aa18.36■□□□□ 0.53
SHROOM1-201ENST00000319854 TFIP11Q9UBB9 837 aaKnown RBP18.36■□□□□ 0.53
SHROOM1-201ENST00000319854 COL5A2P05997 1499 aaPredicted RBP18.36■□□□□ 0.53
SHROOM1-201ENST00000319854 JAK2O60674 1132 aa18.36■□□□□ 0.53
SHROOM1-201ENST00000319854 CDC37L1Q7L3B6 337 aa18.36■□□□□ 0.53
SHROOM1-201ENST00000319854 MTMR6Q9Y217 621 aa18.36■□□□□ 0.53
SHROOM1-201ENST00000319854 RPS6KB1P23443 525 aa18.35■□□□□ 0.53
SHROOM1-201ENST00000319854 TBC1D2BQ9UPU7 963 aa18.35■□□□□ 0.53
SHROOM1-201ENST00000319854 ZNF609O15014 1411 aa18.35■□□□□ 0.53
SHROOM1-201ENST00000319854 CYP21A2P08686 494 aa18.35■□□□□ 0.53
SHROOM1-201ENST00000319854 HLFQ16534 295 aa18.35■□□□□ 0.53
SHROOM1-201ENST00000319854 IL17RAQ96F46 866 aa18.35■□□□□ 0.53
SHROOM1-201ENST00000319854 HAUS7Q99871 368 aa18.35■□□□□ 0.53
SHROOM1-201ENST00000319854 ZBTB22O15209 634 aa18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 ADAMTS2O95450 1211 aa18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 MCMDC2Q4G0Z9 681 aa18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 TMEM87AQ8NBN3 555 aa18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 CEP126Q9P2H0 1117 aa18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 EYA2O00167 538 aa18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 HAND2P61296 217 aa18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 TOB2Q14106 344 aaPredicted RBP18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 WASHC4Q2M389 1173 aa18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 Q6ZUG5 572 aa18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 CCDC191Q8NCU4 936 aa18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 BRF1Q92994 677 aa18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 TM6SF1Q9BZW5 370 aa18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 NCBP1Q09161 790 aaKnown RBP18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 KIF6Q6ZMV9 814 aa18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 ZSCAN31Q96LW9 406 aaPredicted RBP18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 NEK1Q96PY6 1258 aa18.34■□□□□ 0.53
SHROOM1-201ENST00000319854 TTLL5Q6EMB2 1281 aa18.33■□□□□ 0.53
SHROOM1-201ENST00000319854 SH2B1Q9NRF2 756 aaPredicted RBP18.33■□□□□ 0.53
SHROOM1-201ENST00000319854 MED23Q9ULK4 1368 aa18.33■□□□□ 0.53
SHROOM1-201ENST00000319854 KDM4FA0A1W2PPD8 638 aa18.33■□□□□ 0.52
SHROOM1-201ENST00000319854 CEBPZQ03701 1054 aaKnown RBP18.33■□□□□ 0.52
SHROOM1-201ENST00000319854 KBTBD3Q8NAB2 608 aa18.33■□□□□ 0.52
SHROOM1-201ENST00000319854 AFDNP55196 1824 aaKnown RBP18.33■□□□□ 0.52
SHROOM1-201ENST00000319854 IL15P40933 162 aaPredicted RBP18.32■□□□□ 0.52
SHROOM1-201ENST00000319854 CCT2P78371 535 aaKnown RBP18.32■□□□□ 0.52
SHROOM1-201ENST00000319854 RAB11FIP4Q86YS3 637 aa18.32■□□□□ 0.52
SHROOM1-201ENST00000319854 ATG3Q9NT62 314 aa18.32■□□□□ 0.52
SHROOM1-201ENST00000319854 UBE2HP62256 183 aa18.32■□□□□ 0.52
SHROOM1-201ENST00000319854 CHAF1AQ13111 956 aaPredicted RBP18.32■□□□□ 0.52
SHROOM1-201ENST00000319854 CGNQ9P2M7 1197 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms