RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 SLFN14P0C7P3 912 aa16.6■□□□□ 0.25
PABPC1-201ENST00000318607 TERF2Q15554 542 aa16.6■□□□□ 0.25
PABPC1-201ENST00000318607 SUCLG2Q96I99 432 aa16.6■□□□□ 0.25
PABPC1-201ENST00000318607 GOLIM4O00461 696 aa16.59■□□□□ 0.25
PABPC1-201ENST00000318607 HTATSF1O43719 755 aaKnown RBP16.59■□□□□ 0.25
PABPC1-201ENST00000318607 TSPOAP1O95153 1857 aa16.59■□□□□ 0.25
PABPC1-201ENST00000318607 RPS6KB1P23443 525 aa16.59■□□□□ 0.25
PABPC1-201ENST00000318607 UTP14AQ9BVJ6 771 aaKnown RBP16.59■□□□□ 0.25
PABPC1-201ENST00000318607 NECTIN1Q15223 517 aa16.59■□□□□ 0.25
PABPC1-201ENST00000318607 DPCR1Q3MIW9 517 aa16.59■□□□□ 0.25
PABPC1-201ENST00000318607 LMTK3Q96Q04 1460 aa16.59■□□□□ 0.25
PABPC1-201ENST00000318607 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.25
PABPC1-201ENST00000318607 TOB2Q14106 344 aaPredicted RBP16.58■□□□□ 0.25
PABPC1-201ENST00000318607 WASHC4Q2M389 1173 aa16.58■□□□□ 0.25
PABPC1-201ENST00000318607 CARD6Q9BX69 1037 aa16.58■□□□□ 0.25
PABPC1-201ENST00000318607 DLC1Q96QB1 1528 aa16.58■□□□□ 0.25
PABPC1-201ENST00000318607 ATP1A3P13637 1013 aa16.58■□□□□ 0.24
PABPC1-201ENST00000318607 CTIFO43310 598 aaKnown RBP16.58■□□□□ 0.24
PABPC1-201ENST00000318607 NRDCO43847 1150 aa16.58■□□□□ 0.24
PABPC1-201ENST00000318607 STX1AQ16623 288 aa16.58■□□□□ 0.24
PABPC1-201ENST00000318607 TIGD1Q96MW7 591 aa16.58■□□□□ 0.24
PABPC1-201ENST00000318607 MYD88Q99836 296 aa16.58■□□□□ 0.24
PABPC1-201ENST00000318607 HINFPQ9BQA5 517 aa16.58■□□□□ 0.24
PABPC1-201ENST00000318607 CFAP45Q9UL16 551 aa16.58■□□□□ 0.24
PABPC1-201ENST00000318607 CCDC66A2RUB6 948 aa16.57■□□□□ 0.24
PABPC1-201ENST00000318607 ARHGEF28Q8N1W1 1705 aaKnown RBP16.57■□□□□ 0.24
PABPC1-201ENST00000318607 PTPDC1A2A3K4 754 aa16.57■□□□□ 0.24
PABPC1-201ENST00000318607 CPLX1O14810 134 aa16.57■□□□□ 0.24
PABPC1-201ENST00000318607 RBM6P78332 1123 aaKnown RBP16.57■□□□□ 0.24
PABPC1-201ENST00000318607 KARSQ15046 597 aaKnown RBP16.57■□□□□ 0.24
PABPC1-201ENST00000318607 TIMM10P62072 90 aa16.57■□□□□ 0.24
PABPC1-201ENST00000318607 IRX5P78411 483 aaPredicted RBP16.57■□□□□ 0.24
PABPC1-201ENST00000318607 PPARDQ03181 441 aa16.57■□□□□ 0.24
PABPC1-201ENST00000318607 SCRN1Q12765 414 aa16.57■□□□□ 0.24
PABPC1-201ENST00000318607 BEND3Q5T5X7 828 aa16.57■□□□□ 0.24
PABPC1-201ENST00000318607 UBE3BQ7Z3V4 1068 aa16.57■□□□□ 0.24
PABPC1-201ENST00000318607 C10orf67Q8IYJ2 551 aa16.57■□□□□ 0.24
PABPC1-201ENST00000318607 CPS1P31327 1500 aa16.56■□□□□ 0.24
PABPC1-201ENST00000318607 SASH1O94885 1247 aa16.56■□□□□ 0.24
PABPC1-201ENST00000318607 KIAA0232Q92628 1395 aa16.56■□□□□ 0.24
PABPC1-201ENST00000318607 MAP2P11137 1827 aaKnown RBP16.56■□□□□ 0.24
PABPC1-201ENST00000318607 EDC4Q6P2E9 1401 aaKnown RBP16.56■□□□□ 0.24
PABPC1-201ENST00000318607 A0A0G2JS52 829 aa16.56■□□□□ 0.24
PABPC1-201ENST00000318607 PLA2G4DQ86XP0 818 aa16.56■□□□□ 0.24
PABPC1-201ENST00000318607 TMCO3Q6UWJ1 677 aa16.55■□□□□ 0.24
PABPC1-201ENST00000318607 DBNDD2Q9BQY9 259 aa16.55■□□□□ 0.24
PABPC1-201ENST00000318607 TOMM22Q9NS69 142 aa16.55■□□□□ 0.24
PABPC1-201ENST00000318607 TMEM51Q9NW97 253 aa16.55■□□□□ 0.24
PABPC1-201ENST00000318607 MCM6Q14566 821 aa16.55■□□□□ 0.24
PABPC1-201ENST00000318607 ANO10Q9NW15 660 aa16.55■□□□□ 0.24
PABPC1-201ENST00000318607 ANKRD26Q9UPS8 1709 aa16.55■□□□□ 0.24
PABPC1-201ENST00000318607 APPP05067 770 aa16.55■□□□□ 0.24
PABPC1-201ENST00000318607 TFCP2Q12800 502 aa16.55■□□□□ 0.24
PABPC1-201ENST00000318607 C1orf141Q5JVX7 400 aa16.55■□□□□ 0.24
PABPC1-201ENST00000318607 SYNE3Q6ZMZ3 975 aa16.55■□□□□ 0.24
PABPC1-201ENST00000318607 PTPRMP28827 1452 aa16.55■□□□□ 0.24
PABPC1-201ENST00000318607 HNRNPH2P55795 449 aaKnown RBP16.54■□□□□ 0.24
PABPC1-201ENST00000318607 SECISBP2LQ93073 1101 aaKnown RBP16.54■□□□□ 0.24
PABPC1-201ENST00000318607 RABEP2Q9H5N1 569 aa16.54■□□□□ 0.24
PABPC1-201ENST00000318607 KIF24Q5T7B8 1368 aa16.54■□□□□ 0.24
PABPC1-201ENST00000318607 LMAN1P49257 510 aa16.54■□□□□ 0.24
PABPC1-201ENST00000318607 CLCN6P51797 869 aa16.54■□□□□ 0.24
PABPC1-201ENST00000318607 NDUFA8P51970 172 aa16.54■□□□□ 0.24
PABPC1-201ENST00000318607 TDRD7Q8NHU6 1098 aaKnown RBP16.54■□□□□ 0.24
PABPC1-201ENST00000318607 MAP4K1Q92918 833 aa16.54■□□□□ 0.24
PABPC1-201ENST00000318607 DESI2Q9BSY9 194 aa16.54■□□□□ 0.24
PABPC1-201ENST00000318607 COBLO75128 1261 aa16.54■□□□□ 0.24
PABPC1-201ENST00000318607 GNG11P61952 73 aa16.54■□□□□ 0.24
PABPC1-201ENST00000318607 ANKRD1Q15327 319 aa16.54■□□□□ 0.24
PABPC1-201ENST00000318607 CYP21A2P08686 494 aa16.53■□□□□ 0.24
PABPC1-201ENST00000318607 PUF60Q9UHX1 559 aaKnown RBP16.53■□□□□ 0.24
PABPC1-201ENST00000318607 ALKQ9UM73 1620 aa16.53■□□□□ 0.24
PABPC1-201ENST00000318607 NBPF6Q5VWK0 638 aa16.53■□□□□ 0.24
PABPC1-201ENST00000318607 KLHL10Q6JEL2 608 aa16.53■□□□□ 0.24
PABPC1-201ENST00000318607 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.53■□□□□ 0.24
PABPC1-201ENST00000318607 NBPF4Q96M43 638 aa16.53■□□□□ 0.24
PABPC1-201ENST00000318607 PLEKHA4Q9H4M7 779 aa16.53■□□□□ 0.24
PABPC1-201ENST00000318607 ST5P78524 1137 aa16.52■□□□□ 0.24
PABPC1-201ENST00000318607 NAT10Q9H0A0 1025 aaKnown RBP16.52■□□□□ 0.24
PABPC1-201ENST00000318607 CLIC4Q9Y696 253 aa16.52■□□□□ 0.24
PABPC1-201ENST00000318607 CRB1P82279 1406 aa16.52■□□□□ 0.24
PABPC1-201ENST00000318607 SLC3A2P08195 630 aaKnown RBP16.52■□□□□ 0.23
PABPC1-201ENST00000318607 EPHA10Q5JZY3 1008 aa16.52■□□□□ 0.23
PABPC1-201ENST00000318607 AIFM3Q96NN9 605 aa16.52■□□□□ 0.23
PABPC1-201ENST00000318607 ZNF446Q9NWS9 450 aa16.52■□□□□ 0.23
PABPC1-201ENST00000318607 NEXNQ0ZGT2 675 aa16.51■□□□□ 0.23
PABPC1-201ENST00000318607 AMOTL2Q9Y2J4 779 aa16.51■□□□□ 0.23
PABPC1-201ENST00000318607 GRM8O00222 908 aa16.51■□□□□ 0.23
PABPC1-201ENST00000318607 PES1O00541 588 aaKnown RBP16.51■□□□□ 0.23
PABPC1-201ENST00000318607 ZNF827Q17R98 1081 aa16.51■□□□□ 0.23
PABPC1-201ENST00000318607 KRBA2Q6ZNG9 492 aa16.51■□□□□ 0.23
PABPC1-201ENST00000318607 CNPY4Q8N129 248 aa16.51■□□□□ 0.23
PABPC1-201ENST00000318607 ERO1AQ96HE7 468 aa16.51■□□□□ 0.23
PABPC1-201ENST00000318607 IQCB1Q15051 598 aa16.51■□□□□ 0.23
PABPC1-201ENST00000318607 WWC2Q6AWC2 1192 aa16.51■□□□□ 0.23
PABPC1-201ENST00000318607 GDAP1L1Q96MZ0 367 aa16.51■□□□□ 0.23
PABPC1-201ENST00000318607 LZTFL1Q9NQ48 299 aa16.51■□□□□ 0.23
PABPC1-201ENST00000318607 HOXC9P31274 260 aa16.5■□□□□ 0.23
PABPC1-201ENST00000318607 EIF4A1P60842 406 aaKnown RBP16.5■□□□□ 0.23
PABPC1-201ENST00000318607 BMS1Q14692 1282 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms