RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 TFCP2Q12800 502 aa19.01■□□□□ 0.63
USH1C-202ENST00000318024 AMIGO3Q86WK7 504 aa19.01■□□□□ 0.63
USH1C-202ENST00000318024 SYAP1Q96A49 352 aaPredicted RBP19.01■□□□□ 0.63
USH1C-202ENST00000318024 TLR7Q9NYK1 1049 aaKnown RBP19.01■□□□□ 0.63
USH1C-202ENST00000318024 IRS4O14654 1257 aaPredicted RBP19■□□□□ 0.63
USH1C-202ENST00000318024 EPB41L2O43491 1005 aaKnown RBP19■□□□□ 0.63
USH1C-202ENST00000318024 RBM6P78332 1123 aaKnown RBP19■□□□□ 0.63
USH1C-202ENST00000318024 KIAA2012Q0VF49 1180 aa19■□□□□ 0.63
USH1C-202ENST00000318024 MYRIPQ8NFW9 859 aa19■□□□□ 0.63
USH1C-202ENST00000318024 NIP7Q9Y221 180 aaKnown RBP eCLIP19■□□□□ 0.63
USH1C-202ENST00000318024 RPAP1Q9BWH6 1393 aaPredicted RBP19■□□□□ 0.63
USH1C-202ENST00000318024 FAM196AQ6ZSG2 479 aa19■□□□□ 0.63
USH1C-202ENST00000318024 PI4K2BQ8TCG2 481 aa19■□□□□ 0.63
USH1C-202ENST00000318024 LRRC4BQ9NT99 713 aa19■□□□□ 0.63
USH1C-202ENST00000318024 LRRC24Q50LG9 513 aa18.99■□□□□ 0.63
USH1C-202ENST00000318024 USP48Q86UV5 1035 aa18.99■□□□□ 0.63
USH1C-202ENST00000318024 FAM184AQ8NB25 1140 aa18.99■□□□□ 0.63
USH1C-202ENST00000318024 CNTNAP4Q9C0A0 1308 aa18.99■□□□□ 0.63
USH1C-202ENST00000318024 CCDC57Q2TAC2 916 aa18.98■□□□□ 0.63
USH1C-202ENST00000318024 BICDL1Q6ZP65 573 aa18.98■□□□□ 0.63
USH1C-202ENST00000318024 SMAP1Q8IYB5 467 aaPredicted RBP18.98■□□□□ 0.63
USH1C-202ENST00000318024 PIBF1Q8WXW3 757 aa18.98■□□□□ 0.63
USH1C-202ENST00000318024 PUS3Q9BZE2 481 aaKnown RBP18.98■□□□□ 0.63
USH1C-202ENST00000318024 NHSQ6T4R5 1651 aa18.98■□□□□ 0.63
USH1C-202ENST00000318024 HCLS1P14317 486 aaPredicted RBP18.98■□□□□ 0.63
USH1C-202ENST00000318024 MCCP23508 829 aa18.98■□□□□ 0.63
USH1C-202ENST00000318024 GTF2F1P35269 517 aaKnown RBP eCLIP18.98■□□□□ 0.63
USH1C-202ENST00000318024 SRP68Q9UHB9 627 aaKnown RBP18.98■□□□□ 0.63
USH1C-202ENST00000318024 PHF14O94880 888 aa18.97■□□□□ 0.63
USH1C-202ENST00000318024 IL25Q9H293 177 aa18.97■□□□□ 0.63
USH1C-202ENST00000318024 GDPD2Q9HCC8 539 aa18.97■□□□□ 0.63
USH1C-202ENST00000318024 ATG9AQ7Z3C6 839 aa18.97■□□□□ 0.63
USH1C-202ENST00000318024 TTLL11Q8NHH1 800 aa18.97■□□□□ 0.63
USH1C-202ENST00000318024 GREM2Q9H772 168 aa18.97■□□□□ 0.63
USH1C-202ENST00000318024 NUP98P52948 1817 aa18.96■□□□□ 0.63
USH1C-202ENST00000318024 WDR33Q9C0J8 1336 aaKnown RBP18.96■□□□□ 0.63
USH1C-202ENST00000318024 RPS6KA4O75676 772 aa18.96■□□□□ 0.63
USH1C-202ENST00000318024 CSF1RP07333 972 aa18.96■□□□□ 0.63
USH1C-202ENST00000318024 USPL1Q5W0Q7 1092 aa18.96■□□□□ 0.63
USH1C-202ENST00000318024 PLA2G12BQ9BX93 195 aa18.96■□□□□ 0.63
USH1C-202ENST00000318024 CDHR2Q9BYE9 1310 aa18.96■□□□□ 0.63
USH1C-202ENST00000318024 RC3H1Q5TC82 1133 aaKnown RBP18.96■□□□□ 0.63
USH1C-202ENST00000318024 UTP14AQ9BVJ6 771 aaKnown RBP18.96■□□□□ 0.63
USH1C-202ENST00000318024 ANO2Q9NQ90 1003 aa18.96■□□□□ 0.63
USH1C-202ENST00000318024 ECHDC1Q9NTX5 307 aa18.96■□□□□ 0.63
USH1C-202ENST00000318024 RTCBQ9Y3I0 505 aaKnown RBP18.96■□□□□ 0.63
USH1C-202ENST00000318024 AOX1Q06278 1338 aa18.95■□□□□ 0.62
USH1C-202ENST00000318024 HSPA4P34932 840 aa18.95■□□□□ 0.62
USH1C-202ENST00000318024 CTSWP56202 376 aa18.95■□□□□ 0.62
USH1C-202ENST00000318024 IFIT5Q13325 482 aaKnown RBP18.95■□□□□ 0.62
USH1C-202ENST00000318024 PRIMPOLQ96LW4 560 aa18.95■□□□□ 0.62
USH1C-202ENST00000318024 SPTLC3Q9NUV7 552 aa18.95■□□□□ 0.62
USH1C-202ENST00000318024 COL5A3P25940 1745 aaPredicted RBP18.95■□□□□ 0.62
USH1C-202ENST00000318024 ITGA6P23229 1130 aa18.94■□□□□ 0.62
USH1C-202ENST00000318024 TNNI3KQ59H18 835 aa18.94■□□□□ 0.62
USH1C-202ENST00000318024 TAF7LQ5H9L4 462 aa18.94■□□□□ 0.62
USH1C-202ENST00000318024 ZNF710Q8N1W2 664 aa18.94■□□□□ 0.62
USH1C-202ENST00000318024 ARHGEF1Q92888 912 aaKnown RBP18.94■□□□□ 0.62
USH1C-202ENST00000318024 UPF3BQ9BZI7 483 aaKnown RBP18.94■□□□□ 0.62
USH1C-202ENST00000318024 ZNF652Q9Y2D9 606 aa18.94■□□□□ 0.62
USH1C-202ENST00000318024 FPGT-TNNI3KV9GXZ4 949 aa18.94■□□□□ 0.62
USH1C-202ENST00000318024 EYA2O00167 538 aa18.94■□□□□ 0.62
USH1C-202ENST00000318024 PDE8AO60658 829 aa18.94■□□□□ 0.62
USH1C-202ENST00000318024 PTMAP06454 111 aaKnown RBP18.94■□□□□ 0.62
USH1C-202ENST00000318024 RXRBP28702 533 aa18.94■□□□□ 0.62
USH1C-202ENST00000318024 SBF2Q86WG5 1849 aa18.94■□□□□ 0.62
USH1C-202ENST00000318024 SH3TC1Q8TE82 1336 aa18.94■□□□□ 0.62
USH1C-202ENST00000318024 HMGN5P82970 282 aaKnown RBP18.93■□□□□ 0.62
USH1C-202ENST00000318024 NOLC1Q14978 699 aaKnown RBP eCLIP18.93■□□□□ 0.62
USH1C-202ENST00000318024 CCDC183Q5T5S1 534 aa18.93■□□□□ 0.62
USH1C-202ENST00000318024 KLHL34Q8N239 644 aa18.93■□□□□ 0.62
USH1C-202ENST00000318024 FUCA2Q9BTY2 467 aa18.93■□□□□ 0.62
USH1C-202ENST00000318024 BCL2L12Q9HB09 334 aa18.93■□□□□ 0.62
USH1C-202ENST00000318024 TTC41PQ6P2S7 1318 aa18.93■□□□□ 0.62
USH1C-202ENST00000318024 BRWD3Q6RI45 1802 aa18.93■□□□□ 0.62
USH1C-202ENST00000318024 GLRX3O76003 335 aaKnown RBP18.93■□□□□ 0.62
USH1C-202ENST00000318024 TIMM10P62072 90 aa18.93■□□□□ 0.62
USH1C-202ENST00000318024 PARP10Q53GL7 1025 aa18.93■□□□□ 0.62
USH1C-202ENST00000318024 TBC1D9BQ66K14 1250 aa18.93■□□□□ 0.62
USH1C-202ENST00000318024 NOL8Q76FK4 1167 aaKnown RBP18.93■□□□□ 0.62
USH1C-202ENST00000318024 GPATCH3Q96I76 525 aa18.93■□□□□ 0.62
USH1C-202ENST00000318024 TTC14Q96N46 770 aa18.93■□□□□ 0.62
USH1C-202ENST00000318024 NEUROD6Q96NK8 337 aa18.93■□□□□ 0.62
USH1C-202ENST00000318024 CCDC94Q9BW85 323 aaPredicted RBP18.93■□□□□ 0.62
USH1C-202ENST00000318024 USP25Q9UHP3 1055 aa18.93■□□□□ 0.62
USH1C-202ENST00000318024 DBNLQ9UJU6 430 aaKnown RBP18.93■□□□□ 0.62
USH1C-202ENST00000318024 RREB1Q92766 1687 aa18.93■□□□□ 0.62
USH1C-202ENST00000318024 ZPR1O75312 459 aa18.92■□□□□ 0.62
USH1C-202ENST00000318024 CLEC4GQ6UXB4 293 aa18.92■□□□□ 0.62
USH1C-202ENST00000318024 AK7Q96M32 723 aa18.92■□□□□ 0.62
USH1C-202ENST00000318024 BOLA2Q9H3K6 86 aa18.92■□□□□ 0.62
USH1C-202ENST00000318024 CICQ96RK0 1608 aaPredicted RBP18.92■□□□□ 0.62
USH1C-202ENST00000318024 USP42Q9H9J4 1324 aaKnown RBP18.92■□□□□ 0.62
USH1C-202ENST00000318024 NTSR2O95665 410 aa18.92■□□□□ 0.62
USH1C-202ENST00000318024 IL15P40933 162 aaPredicted RBP18.92■□□□□ 0.62
USH1C-202ENST00000318024 DBNDD2Q9BQY9 259 aa18.92■□□□□ 0.62
USH1C-202ENST00000318024 RGS17Q9UGC6 210 aaPredicted RBP18.92■□□□□ 0.62
USH1C-202ENST00000318024 NARFQ9UHQ1 456 aa18.92■□□□□ 0.62
USH1C-202ENST00000318024 ZNF830Q96NB3 372 aaPredicted RBP18.91■□□□□ 0.62
USH1C-202ENST00000318024 ADCY5O95622 1261 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms