RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 VPS37CA5D8V6 355 aaPredicted RBP23.21■■□□□ 1.31
AP3S1-201ENST00000316788 FOXO4P98177 505 aa23.21■■□□□ 1.31
AP3S1-201ENST00000316788 NKX1-1Q15270 411 aaPredicted RBP23.21■■□□□ 1.31
AP3S1-201ENST00000316788 MCMDC2Q4G0Z9 681 aa23.21■■□□□ 1.31
AP3S1-201ENST00000316788 KBTBD3Q8NAB2 608 aa23.21■■□□□ 1.31
AP3S1-201ENST00000316788 ATG3Q9NT62 314 aa23.21■■□□□ 1.31
AP3S1-201ENST00000316788 NUP188Q5SRE5 1749 aa23.21■■□□□ 1.31
AP3S1-201ENST00000316788 DISP2A7MBM2 1401 aa23.2■■□□□ 1.3
AP3S1-201ENST00000316788 NEK1Q96PY6 1258 aa23.19■■□□□ 1.3
AP3S1-201ENST00000316788 DBNDD2Q9BQY9 259 aa23.19■■□□□ 1.3
AP3S1-201ENST00000316788 CWC25Q9NXE8 425 aaPredicted RBP23.19■■□□□ 1.3
AP3S1-201ENST00000316788 KCPQ6ZWJ8 1503 aa23.19■■□□□ 1.3
AP3S1-201ENST00000316788 HMGB1P09429 215 aaKnown RBP23.19■■□□□ 1.3
AP3S1-201ENST00000316788 IL2RBP14784 551 aa23.19■■□□□ 1.3
AP3S1-201ENST00000316788 SCAND2PQ9GZW5 306 aaPredicted RBP23.19■■□□□ 1.3
AP3S1-201ENST00000316788 HELLSQ9NRZ9 838 aa23.19■■□□□ 1.3
AP3S1-201ENST00000316788 TNS2Q63HR2 1409 aa23.19■■□□□ 1.3
AP3S1-201ENST00000316788 TJP1Q07157 1748 aa23.18■■□□□ 1.3
AP3S1-201ENST00000316788 NBPF26B4DH59 902 aa23.18■■□□□ 1.3
AP3S1-201ENST00000316788 IL15P40933 162 aaPredicted RBP23.18■■□□□ 1.3
AP3S1-201ENST00000316788 NBPF14Q5TI25 921 aa23.18■■□□□ 1.3
AP3S1-201ENST00000316788 NBPF10Q6P3W6 841 aaKnown RBP23.18■■□□□ 1.3
AP3S1-201ENST00000316788 LMBR1LQ6UX01 489 aa23.18■■□□□ 1.3
AP3S1-201ENST00000316788 NBPF15Q8N660 670 aa23.18■■□□□ 1.3
AP3S1-201ENST00000316788 THRAP3Q9Y2W1 955 aaKnown RBP23.18■■□□□ 1.3
AP3S1-201ENST00000316788 SPEF2Q9C093 1822 aa23.18■■□□□ 1.3
AP3S1-201ENST00000316788 ATP5J2-PTCD1G3V325 749 aa23.17■■□□□ 1.3
AP3S1-201ENST00000316788 PTCD1O75127 700 aaKnown RBP23.17■■□□□ 1.3
AP3S1-201ENST00000316788 CIAO1O76071 339 aa23.17■■□□□ 1.3
AP3S1-201ENST00000316788 BARGINQ6ZT62 677 aa23.17■■□□□ 1.3
AP3S1-201ENST00000316788 CCDC191Q8NCU4 936 aa23.17■■□□□ 1.3
AP3S1-201ENST00000316788 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.17■■□□□ 1.3
AP3S1-201ENST00000316788 GTF3C6Q969F1 213 aa23.17■■□□□ 1.3
AP3S1-201ENST00000316788 TCHHQ07283 1943 aa23.17■■□□□ 1.3
AP3S1-201ENST00000316788 ATG9AQ7Z3C6 839 aa23.16■■□□□ 1.3
AP3S1-201ENST00000316788 ZCRB1Q8TBF4 217 aaKnown RBP23.16■■□□□ 1.3
AP3S1-201ENST00000316788 EDC3Q96F86 508 aaKnown RBP23.16■■□□□ 1.3
AP3S1-201ENST00000316788 DSCC1Q9BVC3 393 aa23.16■■□□□ 1.3
AP3S1-201ENST00000316788 TAF6LQ9Y6J9 622 aa23.16■■□□□ 1.3
AP3S1-201ENST00000316788 CDC37L1Q7L3B6 337 aa23.16■■□□□ 1.3
AP3S1-201ENST00000316788 DDX54Q8TDD1 881 aaKnown RBP23.16■■□□□ 1.3
AP3S1-201ENST00000316788 LLPHQ9BRT6 129 aaKnown RBP23.16■■□□□ 1.3
AP3S1-201ENST00000316788 RBM6P78332 1123 aaKnown RBP23.15■■□□□ 1.3
AP3S1-201ENST00000316788 TTC6Q86TZ1 520 aa23.15■■□□□ 1.3
AP3S1-201ENST00000316788 FBXO3Q9UK99 471 aa23.15■■□□□ 1.3
AP3S1-201ENST00000316788 WNK3Q9BYP7 1800 aa23.15■■□□□ 1.3
AP3S1-201ENST00000316788 A0A0G2JS52 829 aa23.14■■□□□ 1.3
AP3S1-201ENST00000316788 PIP4K2AP48426 406 aaPredicted RBP23.14■■□□□ 1.3
AP3S1-201ENST00000316788 KDM4AO75164 1064 aa23.13■■□□□ 1.29
AP3S1-201ENST00000316788 PTMAP06454 111 aaKnown RBP23.13■■□□□ 1.29
AP3S1-201ENST00000316788 COL9A3Q14050 684 aaPredicted RBP23.13■■□□□ 1.29
AP3S1-201ENST00000316788 JARID2Q92833 1246 aaPredicted RBP23.13■■□□□ 1.29
AP3S1-201ENST00000316788 DNAJC2Q99543 621 aaKnown RBP23.13■■□□□ 1.29
AP3S1-201ENST00000316788 HCLS1P14317 486 aaPredicted RBP23.13■■□□□ 1.29
AP3S1-201ENST00000316788 RXRBP28702 533 aa23.13■■□□□ 1.29
AP3S1-201ENST00000316788 CHMP4CQ96CF2 233 aa23.13■■□□□ 1.29
AP3S1-201ENST00000316788 EYA2O00167 538 aa23.12■■□□□ 1.29
AP3S1-201ENST00000316788 CYP21A2P08686 494 aa23.12■■□□□ 1.29
AP3S1-201ENST00000316788 CCDC192P0DO97 292 aa23.12■■□□□ 1.29
AP3S1-201ENST00000316788 ZMYM1Q5SVZ6 1142 aa23.12■■□□□ 1.29
AP3S1-201ENST00000316788 SEPT12Q8IYM1 358 aa23.12■■□□□ 1.29
AP3S1-201ENST00000316788 AGXT2Q9BYV1 514 aa23.12■■□□□ 1.29
AP3S1-201ENST00000316788 DDX19AQ9NUU7 478 aaKnown RBP23.12■■□□□ 1.29
AP3S1-201ENST00000316788 PAG1Q9NWQ8 432 aa23.12■■□□□ 1.29
AP3S1-201ENST00000316788 RRP9O43818 475 aaKnown RBP23.11■■□□□ 1.29
AP3S1-201ENST00000316788 ONECUT3O60422 494 aaPredicted RBP23.11■■□□□ 1.29
AP3S1-201ENST00000316788 SMARCC2Q8TAQ2 1214 aa23.11■■□□□ 1.29
AP3S1-201ENST00000316788 ZSCAN16Q9H4T2 348 aaPredicted RBP23.11■■□□□ 1.29
AP3S1-201ENST00000316788 THSD7AQ9UPZ6 1657 aa23.11■■□□□ 1.29
AP3S1-201ENST00000316788 KIAA2012Q0VF49 1180 aa23.11■■□□□ 1.29
AP3S1-201ENST00000316788 GIMAP6Q6P9H5 292 aa23.11■■□□□ 1.29
AP3S1-201ENST00000316788 TTLL7Q6ZT98 887 aa23.11■■□□□ 1.29
AP3S1-201ENST00000316788 USP25Q9UHP3 1055 aa23.11■■□□□ 1.29
AP3S1-201ENST00000316788 PFKFB2O60825 505 aa23.1■■□□□ 1.29
AP3S1-201ENST00000316788 ADCY5O95622 1261 aa23.1■■□□□ 1.29
AP3S1-201ENST00000316788 RBM43Q6ZSC3 357 aaKnown RBP23.1■■□□□ 1.29
AP3S1-201ENST00000316788 Q6ZUG5 572 aa23.1■■□□□ 1.29
AP3S1-201ENST00000316788 DDX46Q7L014 1031 aaKnown RBP23.1■■□□□ 1.29
AP3S1-201ENST00000316788 TCEANC2Q96MN5 208 aa23.1■■□□□ 1.29
AP3S1-201ENST00000316788 NUP62CLQ9H1M0 184 aa23.1■■□□□ 1.29
AP3S1-201ENST00000316788 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.1■■□□□ 1.29
AP3S1-201ENST00000316788 TPM3P06753 285 aa23.09■■□□□ 1.29
AP3S1-201ENST00000316788 RESTQ13127 1097 aa23.09■■□□□ 1.29
AP3S1-201ENST00000316788 TRIM28Q13263 835 aaKnown RBP23.09■■□□□ 1.29
AP3S1-201ENST00000316788 DHX32Q7L7V1 743 aaKnown RBP23.09■■□□□ 1.29
AP3S1-201ENST00000316788 ISCA1Q9BUE6 129 aa23.09■■□□□ 1.29
AP3S1-201ENST00000316788 ABCC12Q96J65 1359 aa23.08■■□□□ 1.29
AP3S1-201ENST00000316788 DDB1Q16531 1140 aa23.08■■□□□ 1.29
AP3S1-201ENST00000316788 MAP3K11Q16584 847 aa23.08■■□□□ 1.29
AP3S1-201ENST00000316788 LRRFIP1Q32MZ4 808 aaKnown RBP23.08■■□□□ 1.29
AP3S1-201ENST00000316788 FBXL16Q8N461 479 aa23.08■■□□□ 1.29
AP3S1-201ENST00000316788 LEO1Q8WVC0 666 aaPredicted RBP23.08■■□□□ 1.29
AP3S1-201ENST00000316788 SPATA32Q96LK8 384 aa23.08■■□□□ 1.29
AP3S1-201ENST00000316788 KIF3AQ9Y496 699 aa23.08■■□□□ 1.29
AP3S1-201ENST00000316788 SHANK3Q9BYB0 1731 aa23.08■■□□□ 1.29
AP3S1-201ENST00000316788 EXOC5O00471 708 aa23.08■■□□□ 1.28
AP3S1-201ENST00000316788 HMGN5P82970 282 aaKnown RBP23.08■■□□□ 1.28
AP3S1-201ENST00000316788 FAM182BQ5T319 152 aa23.08■■□□□ 1.28
AP3S1-201ENST00000316788 NAA16Q6N069 864 aaPredicted RBP23.08■■□□□ 1.28
AP3S1-201ENST00000316788 CCDC129Q6ZRS4 1044 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms