RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 ATP8B2P98198 1209 aa7.77□□□□□ -1.17
ZNF540-201ENST00000316433 TTLL5Q6EMB2 1281 aa7.77□□□□□ -1.17
ZNF540-201ENST00000316433 WAPLQ7Z5K2 1190 aa7.77□□□□□ -1.17
ZNF540-201ENST00000316433 EFCAB13Q8IY85 973 aa7.77□□□□□ -1.17
ZNF540-201ENST00000316433 TATDN2Q93075 761 aa7.77□□□□□ -1.17
ZNF540-201ENST00000316433 CHAMP1Q96JM3 812 aa7.77□□□□□ -1.17
ZNF540-201ENST00000316433 ESYT1Q9BSJ8 1104 aa7.77□□□□□ -1.17
ZNF540-201ENST00000316433 ARAP2Q8WZ64 1704 aa7.76□□□□□ -1.17
ZNF540-201ENST00000316433 HSPA4P34932 840 aa7.76□□□□□ -1.17
ZNF540-201ENST00000316433 PDE1AP54750 535 aa7.76□□□□□ -1.17
ZNF540-201ENST00000316433 C8orf58Q8NAV2 365 aa7.76□□□□□ -1.17
ZNF540-201ENST00000316433 GIMAP7Q8NHV1 300 aa7.76□□□□□ -1.17
ZNF540-201ENST00000316433 ERCC4Q92889 916 aaPredicted RBP7.76□□□□□ -1.17
ZNF540-201ENST00000316433 NUDT16Q96DE0 195 aaKnown RBP7.76□□□□□ -1.17
ZNF540-201ENST00000316433 TTC14Q96N46 770 aa7.76□□□□□ -1.17
ZNF540-201ENST00000316433 FUCA2Q9BTY2 467 aa7.76□□□□□ -1.17
ZNF540-201ENST00000316433 LNPKQ9C0E8 428 aa7.76□□□□□ -1.17
ZNF540-201ENST00000316433 SLC24A3Q9HC58 644 aa7.76□□□□□ -1.17
ZNF540-201ENST00000316433 IRAK4Q9NWZ3 460 aa7.76□□□□□ -1.17
ZNF540-201ENST00000316433 EIF4A2Q14240 407 aaKnown RBP7.76□□□□□ -1.17
ZNF540-201ENST00000316433 C1QTNF12Q5T7M4 302 aa7.76□□□□□ -1.17
ZNF540-201ENST00000316433 ANKRD45Q5TZF3 282 aa7.76□□□□□ -1.17
ZNF540-201ENST00000316433 AP1ARQ63HQ0 302 aa7.76□□□□□ -1.17
ZNF540-201ENST00000316433 STAG1Q8WVM7 1258 aa7.76□□□□□ -1.17
ZNF540-201ENST00000316433 PIK3R5Q8WYR1 880 aa7.76□□□□□ -1.17
ZNF540-201ENST00000316433 U2SURPO15042 1029 aaKnown RBP7.75□□□□□ -1.17
ZNF540-201ENST00000316433 AP5Z1O43299 807 aa7.75□□□□□ -1.17
ZNF540-201ENST00000316433 USP8P40818 1118 aa7.75□□□□□ -1.17
ZNF540-201ENST00000316433 ADCY2Q08462 1091 aa7.75□□□□□ -1.17
ZNF540-201ENST00000316433 TMCO3Q6UWJ1 677 aa7.75□□□□□ -1.17
ZNF540-201ENST00000316433 FMNL3Q8IVF7 1028 aa7.75□□□□□ -1.17
ZNF540-201ENST00000316433 ZCCHC17Q9NP64 241 aaKnown RBP7.75□□□□□ -1.17
ZNF540-201ENST00000316433 PDRG1Q9NUG6 133 aa7.75□□□□□ -1.17
ZNF540-201ENST00000316433 TBX22Q9Y458 520 aa7.75□□□□□ -1.17
ZNF540-201ENST00000316433 ARFGEF2Q9Y6D5 1785 aa7.75□□□□□ -1.17
ZNF540-201ENST00000316433 WDR33Q9C0J8 1336 aaKnown RBP7.75□□□□□ -1.17
ZNF540-201ENST00000316433 NPHP1O15259 732 aa7.75□□□□□ -1.17
ZNF540-201ENST00000316433 ATP8B1O43520 1251 aa7.75□□□□□ -1.17
ZNF540-201ENST00000316433 TADA2BQ86TJ2 420 aa7.75□□□□□ -1.17
ZNF540-201ENST00000316433 ARGLU1Q9NWB6 273 aaPredicted RBP7.75□□□□□ -1.17
ZNF540-201ENST00000316433 SGSM2O43147 1006 aa7.75□□□□□ -1.17
ZNF540-201ENST00000316433 CCDC186Q7Z3E2 898 aa7.75□□□□□ -1.17
ZNF540-201ENST00000316433 TSPYL6Q8N831 410 aa7.75□□□□□ -1.17
ZNF540-201ENST00000316433 GNL3LQ9NVN8 582 aaKnown RBP7.75□□□□□ -1.17
ZNF540-201ENST00000316433 RPS6KA5O75582 802 aa7.74□□□□□ -1.17
ZNF540-201ENST00000316433 PAX7P23759 505 aa7.74□□□□□ -1.17
ZNF540-201ENST00000316433 DHX8Q14562 1220 aaKnown RBP7.74□□□□□ -1.17
ZNF540-201ENST00000316433 ERCC6LQ2NKX8 1250 aa7.74□□□□□ -1.17
ZNF540-201ENST00000316433 DNAJC14Q6Y2X3 702 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-201ENST00000316433 GBP6Q6ZN66 633 aa7.74□□□□□ -1.17
ZNF540-201ENST00000316433 TEX13AQ9BXU3 409 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-201ENST00000316433 ADAM21Q9UKJ8 722 aa7.74□□□□□ -1.17
ZNF540-201ENST00000316433 ANKRD18BA2A2Z9 1011 aa7.74□□□□□ -1.17
ZNF540-201ENST00000316433 GNAI2P04899 355 aa7.74□□□□□ -1.17
ZNF540-201ENST00000316433 CDC25BP30305 580 aa7.74□□□□□ -1.17
ZNF540-201ENST00000316433 LRMPQ12912 555 aa7.74□□□□□ -1.17
ZNF540-201ENST00000316433 HSP90AB4PQ58FF6 505 aa7.74□□□□□ -1.17
ZNF540-201ENST00000316433 CCDC183Q5T5S1 534 aa7.74□□□□□ -1.17
ZNF540-201ENST00000316433 GGT6Q6P531 493 aa7.74□□□□□ -1.17
ZNF540-201ENST00000316433 TEX11Q8IYF3 940 aa7.74□□□□□ -1.17
ZNF540-201ENST00000316433 FBXL16Q8N461 479 aa7.74□□□□□ -1.17
ZNF540-201ENST00000316433 A0A087WUV0 522 aaPredicted RBP7.73□□□□□ -1.17
ZNF540-201ENST00000316433 ELF1P32519 619 aa7.73□□□□□ -1.17
ZNF540-201ENST00000316433 TBC1D8BQ0IIM8 1120 aa7.73□□□□□ -1.17
ZNF540-201ENST00000316433 SMC1AQ14683 1233 aaKnown RBP7.73□□□□□ -1.17
ZNF540-201ENST00000316433 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.73□□□□□ -1.17
ZNF540-201ENST00000316433 ZGPATQ8N5A5 531 aaKnown RBP7.73□□□□□ -1.17
ZNF540-201ENST00000316433 ZSCAN31Q96LW9 406 aaPredicted RBP7.73□□□□□ -1.17
ZNF540-201ENST00000316433 BCL2L13Q9BXK5 485 aa7.73□□□□□ -1.17
ZNF540-201ENST00000316433 SRRTQ9BXP5 876 aaKnown RBP7.73□□□□□ -1.17
ZNF540-201ENST00000316433 SH2B1Q9NRF2 756 aaPredicted RBP7.73□□□□□ -1.17
ZNF540-201ENST00000316433 CHMLP26374 656 aa7.73□□□□□ -1.17
ZNF540-201ENST00000316433 PTPN14Q15678 1187 aa7.73□□□□□ -1.17
ZNF540-201ENST00000316433 CWC27Q6UX04 472 aaKnown RBP7.73□□□□□ -1.17
ZNF540-201ENST00000316433 FILIP1Q7Z7B0 1213 aa7.73□□□□□ -1.17
ZNF540-201ENST00000316433 MICALL1Q8N3F8 863 aa7.73□□□□□ -1.17
ZNF540-201ENST00000316433 PRPF38AQ8NAV1 312 aaKnown RBP7.73□□□□□ -1.17
ZNF540-201ENST00000316433 KLHL23Q8NBE8 558 aa7.73□□□□□ -1.17
ZNF540-201ENST00000316433 MKRN1Q9UHC7 482 aaKnown RBP7.73□□□□□ -1.17
ZNF540-201ENST00000316433 ATP6V1DQ9Y5K8 247 aa7.73□□□□□ -1.17
ZNF540-201ENST00000316433 FOXR1Q6PIV2 292 aa7.72□□□□□ -1.17
ZNF540-201ENST00000316433 ARMCX6Q7L4S7 300 aa7.72□□□□□ -1.17
ZNF540-201ENST00000316433 SH3GL3Q99963 347 aa7.72□□□□□ -1.17
ZNF540-201ENST00000316433 A1CFQ9NQ94 594 aaKnown RBP7.72□□□□□ -1.17
ZNF540-201ENST00000316433 MINK1Q8N4C8 1332 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-201ENST00000316433 GCFC2P16383 781 aaKnown RBP7.72□□□□□ -1.17
ZNF540-201ENST00000316433 HNRNPH1P31943 449 aaKnown RBP7.72□□□□□ -1.17
ZNF540-201ENST00000316433 KCNJ6P48051 423 aa7.72□□□□□ -1.17
ZNF540-201ENST00000316433 NEDD9Q14511 834 aa7.72□□□□□ -1.17
ZNF540-201ENST00000316433 ARHGAP29Q52LW3 1261 aa7.72□□□□□ -1.17
ZNF540-201ENST00000316433 WWC2Q6AWC2 1192 aa7.72□□□□□ -1.17
ZNF540-201ENST00000316433 ZSCAN25Q6NSZ9 544 aa7.72□□□□□ -1.17
ZNF540-201ENST00000316433 NYAP1Q6ZVC0 841 aa7.72□□□□□ -1.17
ZNF540-201ENST00000316433 ERC1Q8IUD2 1116 aa7.72□□□□□ -1.17
ZNF540-201ENST00000316433 CCDC26Q8TAB7 109 aa7.72□□□□□ -1.17
ZNF540-201ENST00000316433 TRIM6Q9C030 488 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-201ENST00000316433 VEZTQ9HBM0 779 aa7.72□□□□□ -1.17
ZNF540-201ENST00000316433 CPSF2Q9P2I0 782 aaKnown RBP7.72□□□□□ -1.17
ZNF540-201ENST00000316433 KINO60870 393 aaKnown RBP7.72□□□□□ -1.17
ZNF540-201ENST00000316433 TRAF1Q13077 416 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms