RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 CCDC191Q8NCU4 936 aa20.43■□□□□ 0.86
SCAMP4-201ENST00000316097 ZNF594Q96JF6 807 aaPredicted RBP20.43■□□□□ 0.86
SCAMP4-201ENST00000316097 AFDNP55196 1824 aaKnown RBP20.43■□□□□ 0.86
SCAMP4-201ENST00000316097 LOC102724428A0A0B4J2F2 783 aa20.42■□□□□ 0.86
SCAMP4-201ENST00000316097 SIK1P57059 783 aa20.42■□□□□ 0.86
SCAMP4-201ENST00000316097 ATP2B3Q16720 1220 aa20.42■□□□□ 0.86
SCAMP4-201ENST00000316097 RABL6Q3YEC7 729 aaPredicted RBP20.42■□□□□ 0.86
SCAMP4-201ENST00000316097 MEX3CQ5U5Q3 659 aaKnown RBP20.42■□□□□ 0.86
SCAMP4-201ENST00000316097 SMIM5Q71RC9 77 aa20.42■□□□□ 0.86
SCAMP4-201ENST00000316097 ISCA1Q9BUE6 129 aa20.42■□□□□ 0.86
SCAMP4-201ENST00000316097 TUBGCP6Q96RT7 1819 aa20.42■□□□□ 0.86
SCAMP4-201ENST00000316097 STX6O43752 255 aa20.42■□□□□ 0.86
SCAMP4-201ENST00000316097 WNK3Q9BYP7 1800 aa20.42■□□□□ 0.86
SCAMP4-201ENST00000316097 SYT1P21579 422 aa20.41■□□□□ 0.86
SCAMP4-201ENST00000316097 MAP3K15Q6ZN16 1313 aa20.41■□□□□ 0.86
SCAMP4-201ENST00000316097 AP5Z1O43299 807 aa20.41■□□□□ 0.86
SCAMP4-201ENST00000316097 TFCP2Q12800 502 aa20.41■□□□□ 0.86
SCAMP4-201ENST00000316097 PYCARDQ9ULZ3 195 aa20.41■□□□□ 0.86
SCAMP4-201ENST00000316097 ERC1Q8IUD2 1116 aa20.4■□□□□ 0.86
SCAMP4-201ENST00000316097 F13A1P00488 732 aa20.4■□□□□ 0.86
SCAMP4-201ENST00000316097 CRKLP46109 303 aaKnown RBP20.4■□□□□ 0.86
SCAMP4-201ENST00000316097 AK2P54819 239 aa20.4■□□□□ 0.86
SCAMP4-201ENST00000316097 INTS5Q6P9B9 1019 aaKnown RBP20.4■□□□□ 0.86
SCAMP4-201ENST00000316097 SPC24Q8NBT2 197 aa20.4■□□□□ 0.86
SCAMP4-201ENST00000316097 KIAA1524Q8TCG1 905 aa20.4■□□□□ 0.86
SCAMP4-201ENST00000316097 KCNF1Q9H3M0 494 aa20.4■□□□□ 0.86
SCAMP4-201ENST00000316097 GIGYF2Q6Y7W6 1299 aaKnown RBP20.4■□□□□ 0.86
SCAMP4-201ENST00000316097 DZIP3Q86Y13 1208 aaKnown RBP20.4■□□□□ 0.86
SCAMP4-201ENST00000316097 FUCA2Q9BTY2 467 aa20.4■□□□□ 0.86
SCAMP4-201ENST00000316097 COPRSQ9NQ92 184 aa20.4■□□□□ 0.86
SCAMP4-201ENST00000316097 SMC3Q9UQE7 1217 aa20.39■□□□□ 0.85
SCAMP4-201ENST00000316097 DTNBO60941 627 aa20.39■□□□□ 0.85
SCAMP4-201ENST00000316097 CHAF1AQ13111 956 aaPredicted RBP20.39■□□□□ 0.85
SCAMP4-201ENST00000316097 PDCL2Q8N4E4 241 aa20.39■□□□□ 0.85
SCAMP4-201ENST00000316097 SNX14Q9Y5W7 946 aa20.39■□□□□ 0.85
SCAMP4-201ENST00000316097 PALLDQ8WX93 1383 aa20.38■□□□□ 0.85
SCAMP4-201ENST00000316097 RIOK3O14730 519 aaKnown RBP20.38■□□□□ 0.85
SCAMP4-201ENST00000316097 ECHDC1Q9NTX5 307 aa20.38■□□□□ 0.85
SCAMP4-201ENST00000316097 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.38■□□□□ 0.85
SCAMP4-201ENST00000316097 NUP188Q5SRE5 1749 aa20.38■□□□□ 0.85
SCAMP4-201ENST00000316097 EP400Q96L91 3159 aa20.38■□□□□ 0.85
SCAMP4-201ENST00000316097 NWD2Q9ULI1 1742 aa20.38■□□□□ 0.85
SCAMP4-201ENST00000316097 TTC14Q96N46 770 aa20.38■□□□□ 0.85
SCAMP4-201ENST00000316097 DIAPH3Q9NSV4 1193 aa20.38■□□□□ 0.85
SCAMP4-201ENST00000316097 NDUFB9Q9Y6M9 179 aa20.38■□□□□ 0.85
SCAMP4-201ENST00000316097 RAD50Q92878 1312 aa20.37■□□□□ 0.85
SCAMP4-201ENST00000316097 SPDYE4A6NLX3 237 aa20.37■□□□□ 0.85
SCAMP4-201ENST00000316097 LRRC24Q50LG9 513 aa20.37■□□□□ 0.85
SCAMP4-201ENST00000316097 RUFY3Q7L099 469 aa20.37■□□□□ 0.85
SCAMP4-201ENST00000316097 PUS3Q9BZE2 481 aaKnown RBP20.37■□□□□ 0.85
SCAMP4-201ENST00000316097 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.37■□□□□ 0.85
SCAMP4-201ENST00000316097 BOLA2Q9H3K6 86 aa20.37■□□□□ 0.85
SCAMP4-201ENST00000316097 LIMCH1Q9UPQ0 1083 aa20.37■□□□□ 0.85
SCAMP4-201ENST00000316097 ATP6V1DQ9Y5K8 247 aa20.37■□□□□ 0.85
SCAMP4-201ENST00000316097 SPATA31A6Q5VVP1 1343 aa20.36■□□□□ 0.85
SCAMP4-201ENST00000316097 DNM1Q05193 864 aaKnown RBP20.36■□□□□ 0.85
SCAMP4-201ENST00000316097 NLRP10Q86W26 655 aa20.36■□□□□ 0.85
SCAMP4-201ENST00000316097 RASEFQ8IZ41 740 aa20.36■□□□□ 0.85
SCAMP4-201ENST00000316097 CCDC87Q9NVE4 849 aa20.36■□□□□ 0.85
SCAMP4-201ENST00000316097 EPB41L2O43491 1005 aaKnown RBP20.36■□□□□ 0.85
SCAMP4-201ENST00000316097 AOX1Q06278 1338 aa20.35■□□□□ 0.85
SCAMP4-201ENST00000316097 SGSM2O43147 1006 aa20.35■□□□□ 0.85
SCAMP4-201ENST00000316097 IL6STP40189 918 aaPredicted RBP20.35■□□□□ 0.85
SCAMP4-201ENST00000316097 GLRX3O76003 335 aaKnown RBP20.35■□□□□ 0.85
SCAMP4-201ENST00000316097 CPA1P15085 419 aa20.35■□□□□ 0.85
SCAMP4-201ENST00000316097 EDC3Q96F86 508 aaKnown RBP20.35■□□□□ 0.85
SCAMP4-201ENST00000316097 GTPBP4Q9BZE4 634 aaKnown RBP20.35■□□□□ 0.85
SCAMP4-201ENST00000316097 AFF2P51816 1311 aa20.35■□□□□ 0.85
SCAMP4-201ENST00000316097 LARGE1O95461 756 aa20.34■□□□□ 0.85
SCAMP4-201ENST00000316097 EIF5P55010 431 aaKnown RBP20.34■□□□□ 0.85
SCAMP4-201ENST00000316097 CWC27Q6UX04 472 aaKnown RBP20.34■□□□□ 0.85
SCAMP4-201ENST00000316097 ATG9AQ7Z3C6 839 aa20.34■□□□□ 0.85
SCAMP4-201ENST00000316097 TTC41PQ6P2S7 1318 aa20.34■□□□□ 0.85
SCAMP4-201ENST00000316097 DBNLQ9UJU6 430 aaKnown RBP20.34■□□□□ 0.85
SCAMP4-201ENST00000316097 TPM3P06753 285 aa20.33■□□□□ 0.85
SCAMP4-201ENST00000316097 TIMM10P62072 90 aa20.33■□□□□ 0.85
SCAMP4-201ENST00000316097 TNNI3KQ59H18 835 aa20.33■□□□□ 0.85
SCAMP4-201ENST00000316097 ZBTB38Q8NAP3 1195 aaPredicted RBP20.33■□□□□ 0.85
SCAMP4-201ENST00000316097 TRMT112Q9UI30 125 aaKnown RBP20.33■□□□□ 0.85
SCAMP4-201ENST00000316097 FPGT-TNNI3KV9GXZ4 949 aa20.33■□□□□ 0.85
SCAMP4-201ENST00000316097 UBN2Q6ZU65 1347 aa20.33■□□□□ 0.85
SCAMP4-201ENST00000316097 GOLGA6L6A8MZA4 724 aa20.33■□□□□ 0.84
SCAMP4-201ENST00000316097 U2AF2P26368 475 aaKnown RBP eCLIP20.33■□□□□ 0.84
SCAMP4-201ENST00000316097 TRIM28Q13263 835 aaKnown RBP20.33■□□□□ 0.84
SCAMP4-201ENST00000316097 CCDC83Q8IWF9 413 aa20.33■□□□□ 0.84
SCAMP4-201ENST00000316097 CNTROBQ8N137 903 aa20.33■□□□□ 0.84
SCAMP4-201ENST00000316097 LSG1Q9H089 658 aaKnown RBP20.33■□□□□ 0.84
SCAMP4-201ENST00000316097 USP42Q9H9J4 1324 aaKnown RBP20.33■□□□□ 0.84
SCAMP4-201ENST00000316097 TJP1Q07157 1748 aa20.32■□□□□ 0.84
SCAMP4-201ENST00000316097 GJB2P29033 226 aa20.32■□□□□ 0.84
SCAMP4-201ENST00000316097 GJD4Q96KN9 370 aaPredicted RBP20.32■□□□□ 0.84
SCAMP4-201ENST00000316097 DBNDD2Q9BQY9 259 aa20.32■□□□□ 0.84
SCAMP4-201ENST00000316097 PCCAP05165 728 aaPredicted RBP20.32■□□□□ 0.84
SCAMP4-201ENST00000316097 CASTP20810 708 aaKnown RBP20.32■□□□□ 0.84
SCAMP4-201ENST00000316097 NEUROD6Q96NK8 337 aa20.32■□□□□ 0.84
SCAMP4-201ENST00000316097 COL15A1P39059 1388 aa20.32■□□□□ 0.84
SCAMP4-201ENST00000316097 CCDC192P0DO97 292 aa20.31■□□□□ 0.84
SCAMP4-201ENST00000316097 LINC00116Q8NCU8 138 aa20.31■□□□□ 0.84
SCAMP4-201ENST00000316097 PODXL2Q9NZ53 605 aa20.31■□□□□ 0.84
SCAMP4-201ENST00000316097 MTMR6Q9Y217 621 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms