RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 IPO8O15397 1037 aaKnown RBP9.93□□□□□ -0.82
CDC42-201ENST00000315554 C21orf2O43822 256 aa9.93□□□□□ -0.82
CDC42-201ENST00000315554 ALDH1L1O75891 902 aa9.93□□□□□ -0.82
CDC42-201ENST00000315554 NBPF7P0C2Y1 421 aaPredicted RBP9.93□□□□□ -0.82
CDC42-201ENST00000315554 CASP7P55210 303 aa9.93□□□□□ -0.82
CDC42-201ENST00000315554 CRY2Q49AN0 593 aa9.93□□□□□ -0.82
CDC42-201ENST00000315554 STYK1Q6J9G0 422 aa9.93□□□□□ -0.82
CDC42-201ENST00000315554 PRPF40BQ6NWY9 871 aaKnown RBP9.93□□□□□ -0.82
CDC42-201ENST00000315554 RBM17Q96I25 401 aaKnown RBP9.93□□□□□ -0.82
CDC42-201ENST00000315554 CDHR2Q9BYE9 1310 aa9.93□□□□□ -0.82
CDC42-201ENST00000315554 RIC1Q4ADV7 1423 aa9.93□□□□□ -0.82
CDC42-201ENST00000315554 GRM8O00222 908 aa9.92□□□□□ -0.82
CDC42-201ENST00000315554 PDE8AO60658 829 aa9.92□□□□□ -0.82
CDC42-201ENST00000315554 RLBP1P12271 317 aa9.92□□□□□ -0.82
CDC42-201ENST00000315554 EPHA10Q5JZY3 1008 aa9.92□□□□□ -0.82
CDC42-201ENST00000315554 PANK1Q8TE04 598 aa9.92□□□□□ -0.82
CDC42-201ENST00000315554 ARHGAP45Q92619 1136 aa9.92□□□□□ -0.82
CDC42-201ENST00000315554 CNKSR1Q969H4 720 aa9.92□□□□□ -0.82
CDC42-201ENST00000315554 SUCLG2Q96I99 432 aa9.92□□□□□ -0.82
CDC42-201ENST00000315554 SEC31BQ9NQW1 1179 aa9.92□□□□□ -0.82
CDC42-201ENST00000315554 PDZRN3Q9UPQ7 1066 aa9.92□□□□□ -0.82
CDC42-201ENST00000315554 ABCC4O15439 1325 aa9.92□□□□□ -0.82
CDC42-201ENST00000315554 COL4A1P02462 1669 aa9.92□□□□□ -0.82
CDC42-201ENST00000315554 LAMB2P55268 1798 aa9.92□□□□□ -0.82
CDC42-201ENST00000315554 DLEC1Q9Y238 1755 aa9.92□□□□□ -0.82
CDC42-201ENST00000315554 BRCA1P38398 1863 aaKnown RBP9.92□□□□□ -0.82
CDC42-201ENST00000315554 CACNA1SQ13698 1873 aa9.92□□□□□ -0.82
CDC42-201ENST00000315554 CCT4P50991 539 aaKnown RBP9.91□□□□□ -0.82
CDC42-201ENST00000315554 CTSWP56202 376 aa9.91□□□□□ -0.82
CDC42-201ENST00000315554 ARHGAP27Q6ZUM4 889 aa9.91□□□□□ -0.82
CDC42-201ENST00000315554 DDX46Q7L014 1031 aaKnown RBP9.91□□□□□ -0.82
CDC42-201ENST00000315554 TMEM57Q8N5G2 664 aa9.91□□□□□ -0.82
CDC42-201ENST00000315554 USP44Q9H0E7 712 aa9.91□□□□□ -0.82
CDC42-201ENST00000315554 CHMP3Q9Y3E7 222 aa9.91□□□□□ -0.82
CDC42-201ENST00000315554 SLX4Q8IY92 1834 aa9.91□□□□□ -0.82
CDC42-201ENST00000315554 PPEF1O14829 653 aaPredicted RBP9.91□□□□□ -0.82
CDC42-201ENST00000315554 HOXA10P31260 410 aaPredicted RBP9.91□□□□□ -0.82
CDC42-201ENST00000315554 SF3B3Q15393 1217 aaKnown RBP9.91□□□□□ -0.82
CDC42-201ENST00000315554 FTSJ3Q8IY81 847 aaKnown RBP9.91□□□□□ -0.82
CDC42-201ENST00000315554 DZIP1LQ8IYY4 767 aaKnown RBP9.91□□□□□ -0.82
CDC42-201ENST00000315554 TTLL11Q8NHH1 800 aa9.91□□□□□ -0.82
CDC42-201ENST00000315554 CELF1Q92879 486 aaKnown RBP9.91□□□□□ -0.82
CDC42-201ENST00000315554 MEIS3Q99687 375 aa9.91□□□□□ -0.82
CDC42-201ENST00000315554 GREM2Q9H772 168 aa9.91□□□□□ -0.82
CDC42-201ENST00000315554 TAF1P21675 1872 aa9.9□□□□□ -0.82
CDC42-201ENST00000315554 ALDH1B1P30837 517 aa9.9□□□□□ -0.83
CDC42-201ENST00000315554 FOXO4P98177 505 aa9.9□□□□□ -0.83
CDC42-201ENST00000315554 RASSF7Q02833 373 aa9.9□□□□□ -0.83
CDC42-201ENST00000315554 GRAPQ13588 217 aa9.9□□□□□ -0.83
CDC42-201ENST00000315554 FAM161AQ3B820 660 aa9.9□□□□□ -0.83
CDC42-201ENST00000315554 CCDC152Q4G0S7 254 aa9.9□□□□□ -0.83
CDC42-201ENST00000315554 C20orf194Q5TEA3 1177 aa9.9□□□□□ -0.83
CDC42-201ENST00000315554 INTS3Q68E01 1043 aaKnown RBP9.9□□□□□ -0.83
CDC42-201ENST00000315554 LMBR1LQ6UX01 489 aa9.9□□□□□ -0.83
CDC42-201ENST00000315554 ITPRIPQ8IWB1 547 aa9.9□□□□□ -0.83
CDC42-201ENST00000315554 GRAPLQ8TC17 118 aaPredicted RBP9.9□□□□□ -0.83
CDC42-201ENST00000315554 RNF166Q96A37 237 aaPredicted RBP9.9□□□□□ -0.83
CDC42-201ENST00000315554 KAZALD1Q96I82 304 aa9.9□□□□□ -0.83
CDC42-201ENST00000315554 CRAMP1Q96RY5 1269 aa9.9□□□□□ -0.83
CDC42-201ENST00000315554 GRIN3BO60391 1043 aa9.89□□□□□ -0.83
CDC42-201ENST00000315554 HSP90B1P14625 803 aaKnown RBP9.89□□□□□ -0.83
CDC42-201ENST00000315554 C7orf43Q8WVR3 580 aa9.89□□□□□ -0.83
CDC42-201ENST00000315554 PLA2G12BQ9BX93 195 aa9.89□□□□□ -0.83
CDC42-201ENST00000315554 UTYO14607 1347 aa9.88□□□□□ -0.83
CDC42-201ENST00000315554 UBTFL1P0CB47 393 aaPredicted RBP9.88□□□□□ -0.83
CDC42-201ENST00000315554 ITGA6P23229 1130 aa9.88□□□□□ -0.83
CDC42-201ENST00000315554 ANKRD44Q8N8A2 993 aa9.88□□□□□ -0.83
CDC42-201ENST00000315554 ZNF594Q96JF6 807 aaPredicted RBP9.88□□□□□ -0.83
CDC42-201ENST00000315554 BICC1Q9H694 974 aaKnown RBP9.88□□□□□ -0.83
CDC42-201ENST00000315554 COG6Q9Y2V7 657 aa9.88□□□□□ -0.83
CDC42-201ENST00000315554 LRRFIP2Q9Y608 721 aaKnown RBP9.88□□□□□ -0.83
CDC42-201ENST00000315554 NFKBIEO00221 500 aa9.87□□□□□ -0.83
CDC42-201ENST00000315554 CSF1RP07333 972 aa9.87□□□□□ -0.83
CDC42-201ENST00000315554 PRELPP51888 382 aa9.87□□□□□ -0.83
CDC42-201ENST00000315554 RPS8P62241 208 aaKnown RBP9.87□□□□□ -0.83
CDC42-201ENST00000315554 CCDC93Q567U6 631 aa9.87□□□□□ -0.83
CDC42-201ENST00000315554 C1orf115Q9H7X2 142 aa9.87□□□□□ -0.83
CDC42-201ENST00000315554 ARFGEF1Q9Y6D6 1849 aa9.87□□□□□ -0.83
CDC42-201ENST00000315554 BBOX1O75936 387 aa9.86□□□□□ -0.83
CDC42-201ENST00000315554 ANKRD18AQ8IVF6 992 aa9.86□□□□□ -0.83
CDC42-201ENST00000315554 ATP6V0A2Q9Y487 856 aa9.86□□□□□ -0.83
CDC42-201ENST00000315554 ANKRD18BA2A2Z9 1011 aa9.85□□□□□ -0.83
CDC42-201ENST00000315554 GNAI3P08754 354 aa9.85□□□□□ -0.83
CDC42-201ENST00000315554 RRP1P56182 461 aaKnown RBP9.85□□□□□ -0.83
CDC42-201ENST00000315554 GPSM2P81274 684 aa9.85□□□□□ -0.83
CDC42-201ENST00000315554 IFIT5Q13325 482 aaKnown RBP9.85□□□□□ -0.83
CDC42-201ENST00000315554 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.85□□□□□ -0.83
CDC42-201ENST00000315554 KLHDC4Q8TBB5 520 aa9.85□□□□□ -0.83
CDC42-201ENST00000315554 GPR101Q96P66 508 aaPredicted RBP9.85□□□□□ -0.83
CDC42-201ENST00000315554 CDC5LQ99459 802 aaKnown RBP9.85□□□□□ -0.83
CDC42-201ENST00000315554 ZNF277Q9NRM2 450 aaPredicted RBP9.85□□□□□ -0.83
CDC42-201ENST00000315554 MYH3P11055 1940 aa9.85□□□□□ -0.83
CDC42-201ENST00000315554 IGHMBP2P38935 993 aaKnown RBP9.85□□□□□ -0.83
CDC42-201ENST00000315554 CCDC57Q2TAC2 916 aa9.85□□□□□ -0.83
CDC42-201ENST00000315554 TAF7LQ5H9L4 462 aa9.85□□□□□ -0.83
CDC42-201ENST00000315554 SOGA3Q5TF21 947 aa9.85□□□□□ -0.83
CDC42-201ENST00000315554 C9orf131Q5VYM1 1079 aa9.85□□□□□ -0.83
CDC42-201ENST00000315554 SP8Q8IXZ3 490 aa9.85□□□□□ -0.83
CDC42-201ENST00000315554 MPNDQ8N594 471 aa9.85□□□□□ -0.83
CDC42-201ENST00000315554 TMX4Q9H1E5 349 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms