RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 LUZP1Q86V48 1076 aa13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 CPLX3Q8WVH0 158 aa13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 YTHDC2Q9H6S0 1430 aaKnown RBP13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 SHANK2Q9UPX8 1470 aa13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 CALM1P0DP23 149 aa13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 CALM2P0DP24 149 aa13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 CALM3P0DP25 149 aa13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 SYKP43405 635 aa13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 BABAM1Q9NWV8 329 aa13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 NSFL1CQ9UNZ2 370 aaKnown RBP13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 PA2G4Q9UQ80 394 aaKnown RBP13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 A0A1W2PP64 1363 aa13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 TCOF1Q13428 1488 aaKnown RBP13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 MCM3P25205 808 aa13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 TMCO3Q6UWJ1 677 aa13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 TFCP2L1Q9NZI6 479 aa13.73□□□□□ -0.21
AMBRA1-201ENST00000314845 MAGEB6P1A0A0J9YX57 407 aa13.72□□□□□ -0.21
AMBRA1-201ENST00000314845 LIG1P18858 919 aa13.72□□□□□ -0.21
AMBRA1-201ENST00000314845 NECAB1Q8N987 351 aa13.72□□□□□ -0.21
AMBRA1-201ENST00000314845 EYA3Q99504 573 aa13.72□□□□□ -0.21
AMBRA1-201ENST00000314845 F8W031 263 aaPredicted RBP13.72□□□□□ -0.21
AMBRA1-201ENST00000314845 KLHL40Q2TBA0 621 aa13.72□□□□□ -0.21
AMBRA1-201ENST00000314845 NCKAP5LQ9HCH0 1330 aa13.72□□□□□ -0.21
AMBRA1-201ENST00000314845 RNF113AO15541 343 aaKnown RBP13.72□□□□□ -0.21
AMBRA1-201ENST00000314845 CWF19L2Q2TBE0 894 aaKnown RBP13.72□□□□□ -0.21
AMBRA1-201ENST00000314845 CEP85Q6P2H3 762 aa13.72□□□□□ -0.21
AMBRA1-201ENST00000314845 PHACTR3Q96KR7 559 aa13.72□□□□□ -0.21
AMBRA1-201ENST00000314845 CARD14Q9BXL6 1004 aa13.72□□□□□ -0.21
AMBRA1-201ENST00000314845 PARP3Q9Y6F1 533 aa13.72□□□□□ -0.21
AMBRA1-201ENST00000314845 GOLGA6L9A6NEM1 432 aa13.71□□□□□ -0.21
AMBRA1-201ENST00000314845 MYCNP04198 464 aaPredicted RBP13.71□□□□□ -0.21
AMBRA1-201ENST00000314845 CALML3P27482 149 aa13.71□□□□□ -0.21
AMBRA1-201ENST00000314845 TRMT1LQ7Z2T5 733 aaKnown RBP13.71□□□□□ -0.21
AMBRA1-201ENST00000314845 TSPYL6Q8N831 410 aa13.71□□□□□ -0.21
AMBRA1-201ENST00000314845 LRRC2Q9BYS8 371 aa13.71□□□□□ -0.21
AMBRA1-201ENST00000314845 EXOC1Q9NV70 894 aa13.71□□□□□ -0.21
AMBRA1-201ENST00000314845 PPFIA3O75145 1194 aa13.71□□□□□ -0.21
AMBRA1-201ENST00000314845 CASQ1P31415 396 aa13.71□□□□□ -0.21
AMBRA1-201ENST00000314845 TCEANC2Q96MN5 208 aa13.71□□□□□ -0.21
AMBRA1-201ENST00000314845 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.71□□□□□ -0.21
AMBRA1-201ENST00000314845 KAT6BQ8WYB5 2073 aa13.71□□□□□ -0.21
AMBRA1-201ENST00000314845 CCDC174Q6PII3 467 aa13.71□□□□□ -0.21
AMBRA1-201ENST00000314845 KIAA0556O60303 1618 aa13.71□□□□□ -0.22
AMBRA1-201ENST00000314845 PRC1O43663 620 aa13.71□□□□□ -0.22
AMBRA1-201ENST00000314845 UVSSAQ2YD98 709 aa13.71□□□□□ -0.22
AMBRA1-201ENST00000314845 USP37Q86T82 979 aa13.71□□□□□ -0.22
AMBRA1-201ENST00000314845 TRIM47Q96LD4 638 aa13.71□□□□□ -0.22
AMBRA1-201ENST00000314845 ALS2CR12Q96Q35 445 aa13.71□□□□□ -0.22
AMBRA1-201ENST00000314845 SPAG1Q07617 926 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 NBPF14Q5TI25 921 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 Q6ZUG5 572 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 TMC6Q7Z403 805 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 GSTTP1A0A1W2PQM5 241 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 HOXB7P09629 217 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 POLD1P28340 1107 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 USP8P40818 1118 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 NMIQ13287 307 aaPredicted RBP13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 TAF3Q5VWG9 929 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 JDP2Q8WYK2 163 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 RAD50Q92878 1312 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 ABCC2Q92887 1545 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 N4BP3O15049 544 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 PICALMQ13492 652 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 PARP10Q53GL7 1025 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 HEATR3Q7Z4Q2 680 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 BTG4Q9NY30 223 aa13.7□□□□□ -0.22
AMBRA1-201ENST00000314845 B4DLN1 442 aa13.69□□□□□ -0.22
AMBRA1-201ENST00000314845 CCDC172P0C7W6 258 aa13.69□□□□□ -0.22
AMBRA1-201ENST00000314845 MRPL12P52815 198 aaKnown RBP13.69□□□□□ -0.22
AMBRA1-201ENST00000314845 NAPAP54920 295 aa13.69□□□□□ -0.22
AMBRA1-201ENST00000314845 C6orf50Q9HD87 102 aa13.69□□□□□ -0.22
AMBRA1-201ENST00000314845 RTL9Q8NET4 1388 aa13.69□□□□□ -0.22
AMBRA1-201ENST00000314845 CALRP27797 417 aaKnown RBP13.69□□□□□ -0.22
AMBRA1-201ENST00000314845 HOOK3Q86VS8 718 aa13.69□□□□□ -0.22
AMBRA1-201ENST00000314845 MRPS27Q92552 414 aaKnown RBP13.69□□□□□ -0.22
AMBRA1-201ENST00000314845 ARHGEF12Q9NZN5 1544 aa13.69□□□□□ -0.22
AMBRA1-201ENST00000314845 MACROD2A1Z1Q3 448 aa13.69□□□□□ -0.22
AMBRA1-201ENST00000314845 TRIM75PA6NK02 468 aa13.69□□□□□ -0.22
AMBRA1-201ENST00000314845 NAA15Q9BXJ9 866 aaKnown RBP13.69□□□□□ -0.22
AMBRA1-201ENST00000314845 MCM9Q9NXL9 1143 aa13.69□□□□□ -0.22
AMBRA1-201ENST00000314845 HELBQ8NG08 1087 aaPredicted RBP13.69□□□□□ -0.22
AMBRA1-201ENST00000314845 ZBTB40Q9NUA8 1239 aa13.69□□□□□ -0.22
AMBRA1-201ENST00000314845 LDHBP07195 334 aaKnown RBP13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 NF2P35240 595 aa13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 STAT6P42226 847 aa13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 KRT24Q2M2I5 525 aa13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 LMTK3Q96Q04 1460 aa13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 TMEM87AQ8NBN3 555 aa13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 SMARCC2Q8TAQ2 1214 aa13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 CTNNA2P26232 953 aa13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 SMC5Q8IY18 1101 aa13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 CTNNBL1Q8WYA6 563 aaPredicted RBP13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 TAOK3Q9H2K8 898 aa13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 SBNO1A3KN83 1393 aa13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 MAPKBP1O60336 1514 aa13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 TRAPPC3LQ5T215 181 aa13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 ZNF790Q6PG37 636 aa13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 FERMT2Q96AC1 680 aa13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 ADAMTS12P58397 1594 aa13.68□□□□□ -0.22
AMBRA1-201ENST00000314845 SH3TC1Q8TE82 1336 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms