RNA–Protein interactions for RNA: ENST00000313663.11

C2CD3-201, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C2CD3, Length 6,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-201ENST00000313663 KIF2AO00139 706 aaPredicted RBP10.3□□□□□ -0.76
C2CD3-201ENST00000313663 CTNNA2P26232 953 aa10.3□□□□□ -0.76
C2CD3-201ENST00000313663 MPNDQ8N594 471 aa10.3□□□□□ -0.76
C2CD3-201ENST00000313663 TTF1Q15361 905 aaPredicted RBP10.29□□□□□ -0.76
C2CD3-201ENST00000313663 TCERG1LQ5VWI1 586 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 USHBP1Q8N6Y0 703 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 ANO10Q9NW15 660 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 GOLGA8AA7E2F4 631 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 GOLGA8BA8MQT2 603 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 NBPF6Q5VWK0 638 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 TRMT1LQ7Z2T5 733 aaKnown RBP10.29□□□□□ -0.76
C2CD3-201ENST00000313663 NBPF5PQ86XG9 351 aaPredicted RBP10.29□□□□□ -0.76
C2CD3-201ENST00000313663 CCDC148Q8NFR7 591 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 NBPF4Q96M43 638 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 UBAP1LF5GYI3 381 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 NBPF7P0C2Y1 421 aaPredicted RBP10.29□□□□□ -0.76
C2CD3-201ENST00000313663 PAFAH1B1P43034 410 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 HSPA2P54652 639 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 TDRD12Q587J7 1177 aaKnown RBP10.29□□□□□ -0.76
C2CD3-201ENST00000313663 CCDC83Q8IWF9 413 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 ARHGEF10O15013 1369 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 FAM83GA6ND36 823 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 HOXC9P31274 260 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 AMPD3Q01432 767 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 LUZP1Q86V48 1076 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 ECHDC1Q9NTX5 307 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 STX8Q9UNK0 236 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 SAMM50Q9Y512 469 aa10.29□□□□□ -0.76
C2CD3-201ENST00000313663 EYA1Q99502 592 aa10.28□□□□□ -0.76
C2CD3-201ENST00000313663 LIG1P18858 919 aa10.28□□□□□ -0.76
C2CD3-201ENST00000313663 ALDH1L2Q3SY69 923 aa10.28□□□□□ -0.76
C2CD3-201ENST00000313663 CALML4Q96GE6 196 aa10.28□□□□□ -0.76
C2CD3-201ENST00000313663 UBE3BQ7Z3V4 1068 aa10.28□□□□□ -0.76
C2CD3-201ENST00000313663 FERMT1Q9BQL6 677 aa10.28□□□□□ -0.76
C2CD3-201ENST00000313663 USO1O60763 962 aaKnown RBP10.28□□□□□ -0.76
C2CD3-201ENST00000313663 IARSP41252 1262 aaKnown RBP10.28□□□□□ -0.76
C2CD3-201ENST00000313663 MBIPQ9NS73 344 aa10.28□□□□□ -0.76
C2CD3-201ENST00000313663 ACTN2P35609 894 aa10.28□□□□□ -0.76
C2CD3-201ENST00000313663 PPP4R3BQ5MIZ7 849 aa10.28□□□□□ -0.76
C2CD3-201ENST00000313663 DYDC1Q8WWB3 177 aa10.28□□□□□ -0.76
C2CD3-201ENST00000313663 CWC25Q9NXE8 425 aaPredicted RBP10.28□□□□□ -0.76
C2CD3-201ENST00000313663 HDAC9Q9UKV0 1011 aa10.28□□□□□ -0.76
C2CD3-201ENST00000313663 IGSF1Q8N6C5 1336 aa10.27□□□□□ -0.76
C2CD3-201ENST00000313663 ZSCAN12O43309 604 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 CTNNBL1Q8WYA6 563 aaPredicted RBP10.27□□□□□ -0.77
C2CD3-201ENST00000313663 INCENPQ9NQS7 918 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 NALCNQ8IZF0 1738 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 RLBP1P12271 317 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 NF2P35240 595 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 FLIIQ13045 1269 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 CCDC174Q6PII3 467 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 ZNF853P0CG23 659 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 TNNT1P13805 278 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 USP8P40818 1118 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 FAM193AP78312 1265 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 GRIPAP1Q4V328 841 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 CCDC102AQ96A19 550 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 NLRP3Q96P20 1036 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 KDM2BQ8NHM5 1336 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 TMEM94Q12767 1356 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 RGPD8O14715 1765 aaPredicted RBP10.27□□□□□ -0.77
C2CD3-201ENST00000313663 SMARCC1Q92922 1105 aaPredicted RBP10.27□□□□□ -0.77
C2CD3-201ENST00000313663 SNRKQ9NRH2 765 aa10.27□□□□□ -0.77
C2CD3-201ENST00000313663 PABPN1LA6NDY0 278 aaKnown RBP10.26□□□□□ -0.77
C2CD3-201ENST00000313663 B4DLN1 442 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 STAMBPO95630 424 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 UQCRFS1P1P0C7P4 283 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 MRPL12P52815 198 aaKnown RBP10.26□□□□□ -0.77
C2CD3-201ENST00000313663 ST5P78524 1137 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 SSRP1Q08945 709 aaKnown RBP10.26□□□□□ -0.77
C2CD3-201ENST00000313663 SPECC1Q5M775 1068 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 KAT14Q9H8E8 782 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 VAT1LQ9HCJ6 419 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 F6X3S4 739 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 SNRPA1P09661 255 aaKnown RBP10.26□□□□□ -0.77
C2CD3-201ENST00000313663 KIF4BQ2VIQ3 1234 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 CCDC40Q4G0X9 1142 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 PYM1Q9BRP8 204 aaKnown RBP10.26□□□□□ -0.77
C2CD3-201ENST00000313663 BACH2Q9BYV9 841 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 CLEC11AQ9Y240 323 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 RTL1A6NKG5 1358 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 STX6O43752 255 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 TRIM27P14373 513 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 KDRP35968 1356 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 MTIF2P46199 727 aaKnown RBP10.26□□□□□ -0.77
C2CD3-201ENST00000313663 USP37Q86T82 979 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 TNNQ9UQP3 1299 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 CNNM3Q8NE01 707 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 CRNKL1Q9BZJ0 848 aaKnown RBP10.26□□□□□ -0.77
C2CD3-201ENST00000313663 PIK3C2AO00443 1686 aa10.26□□□□□ -0.77
C2CD3-201ENST00000313663 TOP1P11387 765 aaKnown RBP10.25□□□□□ -0.77
C2CD3-201ENST00000313663 MCM4P33991 863 aa10.25□□□□□ -0.77
C2CD3-201ENST00000313663 SYCP3Q8IZU3 236 aa10.25□□□□□ -0.77
C2CD3-201ENST00000313663 CTAGE5O15320 804 aa10.25□□□□□ -0.77
C2CD3-201ENST00000313663 KIF5CO60282 957 aa10.25□□□□□ -0.77
C2CD3-201ENST00000313663 FERMT2Q96AC1 680 aa10.25□□□□□ -0.77
C2CD3-201ENST00000313663 CCDC113Q9H0I3 377 aa10.25□□□□□ -0.77
C2CD3-201ENST00000313663 TAOK3Q9H2K8 898 aa10.25□□□□□ -0.77
C2CD3-201ENST00000313663 USP16Q9Y5T5 823 aa10.25□□□□□ -0.77
C2CD3-201ENST00000313663 LRRC27Q9C0I9 530 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms