RNA–Protein interactions for RNA: ENST00000312492.2

HOXC5-201, Transcript of homeobox C5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC5, Length 1,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5-201ENST00000312492 LRRC4BQ9NT99 713 aa20.54■□□□□ 0.88
HOXC5-201ENST00000312492 UBR3Q6ZT12 1888 aa20.54■□□□□ 0.88
HOXC5-201ENST00000312492 ST18O60284 1047 aa20.53■□□□□ 0.88
HOXC5-201ENST00000312492 GTF2E1P29083 439 aaPredicted RBP20.53■□□□□ 0.88
HOXC5-201ENST00000312492 HSPA4P34932 840 aa20.53■□□□□ 0.88
HOXC5-201ENST00000312492 RFC4P35249 363 aa20.53■□□□□ 0.88
HOXC5-201ENST00000312492 TTC39AQ5SRH9 613 aa20.53■□□□□ 0.88
HOXC5-201ENST00000312492 MPHOSPH8Q99549 860 aa20.53■□□□□ 0.88
HOXC5-201ENST00000312492 SLKQ9H2G2 1235 aaPredicted RBP20.53■□□□□ 0.88
HOXC5-201ENST00000312492 ARAP2Q8WZ64 1704 aa20.53■□□□□ 0.88
HOXC5-201ENST00000312492 ABCC12Q96J65 1359 aa20.53■□□□□ 0.88
HOXC5-201ENST00000312492 K7ELQ4 463 aaPredicted RBP20.53■□□□□ 0.88
HOXC5-201ENST00000312492 PHF14O94880 888 aa20.53■□□□□ 0.88
HOXC5-201ENST00000312492 AMIGO3Q86WK7 504 aa20.53■□□□□ 0.88
HOXC5-201ENST00000312492 VGLL2Q8N8G2 317 aa20.53■□□□□ 0.88
HOXC5-201ENST00000312492 FAM227BQ96M60 508 aa20.53■□□□□ 0.88
HOXC5-201ENST00000312492 PAG1Q9NWQ8 432 aa20.53■□□□□ 0.88
HOXC5-201ENST00000312492 NDUFB9Q9Y6M9 179 aa20.53■□□□□ 0.88
HOXC5-201ENST00000312492 PDE8BO95263 885 aa20.52■□□□□ 0.88
HOXC5-201ENST00000312492 CD2BP2O95400 341 aaKnown RBP20.52■□□□□ 0.88
HOXC5-201ENST00000312492 ADRA2BP18089 450 aa20.52■□□□□ 0.88
HOXC5-201ENST00000312492 ADORA1P30542 326 aa20.52■□□□□ 0.88
HOXC5-201ENST00000312492 IGHMBP2P38935 993 aaKnown RBP20.52■□□□□ 0.88
HOXC5-201ENST00000312492 DDX46Q7L014 1031 aaKnown RBP20.52■□□□□ 0.88
HOXC5-201ENST00000312492 SEC31BQ9NQW1 1179 aa20.52■□□□□ 0.88
HOXC5-201ENST00000312492 PALD1Q9ULE6 856 aa20.52■□□□□ 0.88
HOXC5-201ENST00000312492 KBTBD3Q8NAB2 608 aa20.51■□□□□ 0.87
HOXC5-201ENST00000312492 SNRKQ9NRH2 765 aa20.51■□□□□ 0.87
HOXC5-201ENST00000312492 A0A0D9SFI3 127 aa20.5■□□□□ 0.87
HOXC5-201ENST00000312492 GOLIM4O00461 696 aa20.5■□□□□ 0.87
HOXC5-201ENST00000312492 NBPF5PQ86XG9 351 aaPredicted RBP20.5■□□□□ 0.87
HOXC5-201ENST00000312492 TICAM2Q86XR7 235 aa20.5■□□□□ 0.87
HOXC5-201ENST00000312492 SPRYD3Q8NCJ5 442 aa20.5■□□□□ 0.87
HOXC5-201ENST00000312492 IL17RAQ96F46 866 aa20.5■□□□□ 0.87
HOXC5-201ENST00000312492 SLC10A5Q5PT55 438 aa20.5■□□□□ 0.87
HOXC5-201ENST00000312492 CDC5LQ99459 802 aaKnown RBP20.5■□□□□ 0.87
HOXC5-201ENST00000312492 CCDC171Q6TFL3 1326 aa20.5■□□□□ 0.87
HOXC5-201ENST00000312492 MED23Q9ULK4 1368 aa20.5■□□□□ 0.87
HOXC5-201ENST00000312492 HMGB2P26583 209 aaKnown RBP20.49■□□□□ 0.87
HOXC5-201ENST00000312492 SF3B3Q15393 1217 aaKnown RBP20.49■□□□□ 0.87
HOXC5-201ENST00000312492 PUM3Q15397 648 aaKnown RBP20.49■□□□□ 0.87
HOXC5-201ENST00000312492 TPTE2Q6XPS3 522 aa20.48■□□□□ 0.87
HOXC5-201ENST00000312492 ANTXR1Q9H6X2 564 aa20.48■□□□□ 0.87
HOXC5-201ENST00000312492 PTH1RQ03431 593 aa20.48■□□□□ 0.87
HOXC5-201ENST00000312492 LPIN2Q92539 896 aa20.48■□□□□ 0.87
HOXC5-201ENST00000312492 HSP90AA1P07900 732 aaKnown RBP20.47■□□□□ 0.87
HOXC5-201ENST00000312492 A0A1B0GUL6 1792 aa20.46■□□□□ 0.87
HOXC5-201ENST00000312492 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.46■□□□□ 0.87
HOXC5-201ENST00000312492 RXRBP28702 533 aa20.46■□□□□ 0.87
HOXC5-201ENST00000312492 NEK4P51957 841 aa20.46■□□□□ 0.87
HOXC5-201ENST00000312492 FKBP4Q02790 459 aaKnown RBP eCLIP20.46■□□□□ 0.87
HOXC5-201ENST00000312492 IL27Q8NEV9 243 aa20.46■□□□□ 0.87
HOXC5-201ENST00000312492 CARMIL3Q8ND23 1372 aa20.46■□□□□ 0.87
HOXC5-201ENST00000312492 SLC5A1P13866 664 aa20.46■□□□□ 0.87
HOXC5-201ENST00000312492 FGFR2P21802 821 aa20.46■□□□□ 0.87
HOXC5-201ENST00000312492 NBR1Q14596 966 aa20.46■□□□□ 0.87
HOXC5-201ENST00000312492 LRRFIP1Q32MZ4 808 aaKnown RBP20.46■□□□□ 0.87
HOXC5-201ENST00000312492 ANKRD18AQ8IVF6 992 aa20.46■□□□□ 0.87
HOXC5-201ENST00000312492 HELBQ8NG08 1087 aaPredicted RBP20.46■□□□□ 0.87
HOXC5-201ENST00000312492 ZNF512BQ96KM6 892 aaPredicted RBP20.46■□□□□ 0.87
HOXC5-201ENST00000312492 SNX14Q9Y5W7 946 aa20.46■□□□□ 0.87
HOXC5-201ENST00000312492 SSFA2P28290 1259 aa20.45■□□□□ 0.86
HOXC5-201ENST00000312492 KCNJ4P48050 445 aa20.45■□□□□ 0.86
HOXC5-201ENST00000312492 TXNRD1Q16881 649 aa20.45■□□□□ 0.86
HOXC5-201ENST00000312492 C3orf67Q6ZVT6 689 aa20.45■□□□□ 0.86
HOXC5-201ENST00000312492 NLRP3Q96P20 1036 aa20.45■□□□□ 0.86
HOXC5-201ENST00000312492 MYH7P12883 1935 aa20.44■□□□□ 0.86
HOXC5-201ENST00000312492 AKAP11Q9UKA4 1901 aa20.44■□□□□ 0.86
HOXC5-201ENST00000312492 COL4A1P02462 1669 aa20.44■□□□□ 0.86
HOXC5-201ENST00000312492 NPHP1O15259 732 aa20.44■□□□□ 0.86
HOXC5-201ENST00000312492 MCM2P49736 904 aa20.44■□□□□ 0.86
HOXC5-201ENST00000312492 MCMDC2Q4G0Z9 681 aa20.44■□□□□ 0.86
HOXC5-201ENST00000312492 MAP4K1Q92918 833 aa20.44■□□□□ 0.86
HOXC5-201ENST00000312492 RBM8AQ9Y5S9 174 aaKnown RBP20.44■□□□□ 0.86
HOXC5-201ENST00000312492 TAF1P21675 1872 aa20.44■□□□□ 0.86
HOXC5-201ENST00000312492 UQCRFS1P1P0C7P4 283 aa20.43■□□□□ 0.86
HOXC5-201ENST00000312492 PRPF40BQ6NWY9 871 aaKnown RBP20.43■□□□□ 0.86
HOXC5-201ENST00000312492 ZNF589Q86UQ0 364 aaPredicted RBP20.43■□□□□ 0.86
HOXC5-201ENST00000312492 HELLSQ9NRZ9 838 aa20.43■□□□□ 0.86
HOXC5-201ENST00000312492 SCARF1Q14162 830 aa20.43■□□□□ 0.86
HOXC5-201ENST00000312492 RNF113AO15541 343 aaKnown RBP20.42■□□□□ 0.86
HOXC5-201ENST00000312492 TAF5LO75529 589 aa20.42■□□□□ 0.86
HOXC5-201ENST00000312492 ZAP70P43403 619 aa20.42■□□□□ 0.86
HOXC5-201ENST00000312492 CHRNDQ07001 517 aa20.42■□□□□ 0.86
HOXC5-201ENST00000312492 NFIXQ14938 502 aa20.42■□□□□ 0.86
HOXC5-201ENST00000312492 NECTIN1Q15223 517 aa20.42■□□□□ 0.86
HOXC5-201ENST00000312492 CCDC102BQ68D86 513 aa20.42■□□□□ 0.86
HOXC5-201ENST00000312492 CHMP5Q9NZZ3 219 aa20.42■□□□□ 0.86
HOXC5-201ENST00000312492 TNRC6CQ9HCJ0 1690 aaKnown RBP20.42■□□□□ 0.86
HOXC5-201ENST00000312492 ZKSCAN1P17029 563 aaPredicted RBP20.41■□□□□ 0.86
HOXC5-201ENST00000312492 ARID4AP29374 1257 aaPredicted RBP20.41■□□□□ 0.86
HOXC5-201ENST00000312492 MCAMP43121 646 aa20.41■□□□□ 0.86
HOXC5-201ENST00000312492 RASEFQ8IZ41 740 aa20.41■□□□□ 0.86
HOXC5-201ENST00000312492 KCNB2Q92953 911 aa20.41■□□□□ 0.86
HOXC5-201ENST00000312492 EP400Q96L91 3159 aa20.41■□□□□ 0.86
HOXC5-201ENST00000312492 CHGBP05060 677 aa20.41■□□□□ 0.86
HOXC5-201ENST00000312492 RNF20Q5VTR2 975 aa20.41■□□□□ 0.86
HOXC5-201ENST00000312492 UPF3BQ9BZI7 483 aaKnown RBP20.41■□□□□ 0.86
HOXC5-201ENST00000312492 BSDC1Q9NW68 430 aaPredicted RBP20.41■□□□□ 0.86
HOXC5-201ENST00000312492 PLSCR1O15162 318 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms