RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 RGS22Q8NE09 1264 aa21.09■□□□□ 0.97
SPSB4-201ENST00000310546 CHMP4CQ96CF2 233 aa21.09■□□□□ 0.97
SPSB4-201ENST00000310546 CCDC34Q96HJ3 373 aa21.09■□□□□ 0.97
SPSB4-201ENST00000310546 TUBGCP6Q96RT7 1819 aa21.09■□□□□ 0.97
SPSB4-201ENST00000310546 STK31Q9BXU1 1019 aa21.08■□□□□ 0.97
SPSB4-201ENST00000310546 OAS2P29728 719 aaKnown RBP21.08■□□□□ 0.97
SPSB4-201ENST00000310546 CCDC93Q567U6 631 aa21.08■□□□□ 0.97
SPSB4-201ENST00000310546 USP54Q70EL1 1684 aa21.08■□□□□ 0.97
SPSB4-201ENST00000310546 SOS1Q07889 1333 aaPredicted RBP21.08■□□□□ 0.96
SPSB4-201ENST00000310546 ZKSCAN1P17029 563 aaPredicted RBP21.08■□□□□ 0.96
SPSB4-201ENST00000310546 MNS1Q8NEH6 495 aa21.08■□□□□ 0.96
SPSB4-201ENST00000310546 ERCC4Q92889 916 aaPredicted RBP21.08■□□□□ 0.96
SPSB4-201ENST00000310546 DDX11Q96FC9 970 aa21.08■□□□□ 0.96
SPSB4-201ENST00000310546 TSPYL4Q9UJ04 414 aa21.08■□□□□ 0.96
SPSB4-201ENST00000310546 LTN1O94822 1766 aa21.08■□□□□ 0.96
SPSB4-201ENST00000310546 STX1AQ16623 288 aa21.07■□□□□ 0.96
SPSB4-201ENST00000310546 ORC3Q9UBD5 711 aaPredicted RBP21.07■□□□□ 0.96
SPSB4-201ENST00000310546 DNAI1Q9UI46 699 aa21.07■□□□□ 0.96
SPSB4-201ENST00000310546 EPC1Q9H2F5 836 aa21.07■□□□□ 0.96
SPSB4-201ENST00000310546 DHX16O60231 1041 aaKnown RBP21.06■□□□□ 0.96
SPSB4-201ENST00000310546 IP6K1Q92551 441 aa21.06■□□□□ 0.96
SPSB4-201ENST00000310546 LGR6Q9HBX8 967 aa21.06■□□□□ 0.96
SPSB4-201ENST00000310546 GSDMDP57764 484 aa21.06■□□□□ 0.96
SPSB4-201ENST00000310546 AOPEPQ8N6M6 819 aa21.06■□□□□ 0.96
SPSB4-201ENST00000310546 RHPN1Q8TCX5 695 aa21.06■□□□□ 0.96
SPSB4-201ENST00000310546 UBTFL1P0CB47 393 aaPredicted RBP21.05■□□□□ 0.96
SPSB4-201ENST00000310546 FLIIQ13045 1269 aa21.05■□□□□ 0.96
SPSB4-201ENST00000310546 MPRIPQ6WCQ1 1025 aa21.05■□□□□ 0.96
SPSB4-201ENST00000310546 DHX40Q8IX18 779 aaKnown RBP21.05■□□□□ 0.96
SPSB4-201ENST00000310546 C1orf167Q5SNV9 1468 aa21.05■□□□□ 0.96
SPSB4-201ENST00000310546 IL17REQ8NFR9 667 aa21.05■□□□□ 0.96
SPSB4-201ENST00000310546 SASH3O75995 380 aa21.04■□□□□ 0.96
SPSB4-201ENST00000310546 CSB-PGBD3P0DP91 1061 aa21.04■□□□□ 0.96
SPSB4-201ENST00000310546 NOP2P46087 812 aaKnown RBP21.04■□□□□ 0.96
SPSB4-201ENST00000310546 SMC1AQ14683 1233 aaKnown RBP21.04■□□□□ 0.96
SPSB4-201ENST00000310546 NLRP2Q9NX02 1062 aa21.04■□□□□ 0.96
SPSB4-201ENST00000310546 DCCP43146 1447 aa21.04■□□□□ 0.96
SPSB4-201ENST00000310546 URI1O94763 535 aaPredicted RBP21.04■□□□□ 0.96
SPSB4-201ENST00000310546 CASQ1P31415 396 aa21.04■□□□□ 0.96
SPSB4-201ENST00000310546 PPP1R42Q7Z4L9 355 aa21.04■□□□□ 0.96
SPSB4-201ENST00000310546 ANKRD24Q8TF21 1146 aa21.04■□□□□ 0.96
SPSB4-201ENST00000310546 RUFY2Q8WXA3 655 aa21.04■□□□□ 0.96
SPSB4-201ENST00000310546 CRB1P82279 1406 aa21.03■□□□□ 0.96
SPSB4-201ENST00000310546 LMAN1P49257 510 aa21.03■□□□□ 0.96
SPSB4-201ENST00000310546 GTF2A1P52655 376 aaPredicted RBP21.03■□□□□ 0.96
SPSB4-201ENST00000310546 TM6SF1Q9BZW5 370 aa21.03■□□□□ 0.96
SPSB4-201ENST00000310546 CWC15Q9P013 229 aaKnown RBP21.03■□□□□ 0.96
SPSB4-201ENST00000310546 SMC2O95347 1197 aa21.03■□□□□ 0.96
SPSB4-201ENST00000310546 IFIT2P09913 472 aaKnown RBP21.03■□□□□ 0.96
SPSB4-201ENST00000310546 SFPQP23246 707 aaKnown RBP eCLIP21.03■□□□□ 0.96
SPSB4-201ENST00000310546 NBPF11Q86T75 865 aa21.03■□□□□ 0.96
SPSB4-201ENST00000310546 CADPS2Q86UW7 1296 aa21.03■□□□□ 0.96
SPSB4-201ENST00000310546 TMC6Q7Z403 805 aa21.02■□□□□ 0.96
SPSB4-201ENST00000310546 ARHGEF25Q86VW2 580 aa21.02■□□□□ 0.96
SPSB4-201ENST00000310546 USP44Q9H0E7 712 aa21.02■□□□□ 0.96
SPSB4-201ENST00000310546 KCND1Q9NSA2 647 aa21.02■□□□□ 0.96
SPSB4-201ENST00000310546 CARD6Q9BX69 1037 aa21.02■□□□□ 0.96
SPSB4-201ENST00000310546 KCNH5Q8NCM2 988 aa21.01■□□□□ 0.95
SPSB4-201ENST00000310546 MST1RQ04912 1400 aa21.01■□□□□ 0.95
SPSB4-201ENST00000310546 SRGAP3O43295 1099 aa21.01■□□□□ 0.95
SPSB4-201ENST00000310546 ARMCX5Q6P1M9 558 aa21.01■□□□□ 0.95
SPSB4-201ENST00000310546 RBM8AQ9Y5S9 174 aaKnown RBP21.01■□□□□ 0.95
SPSB4-201ENST00000310546 NFAT5O94916 1531 aa21.01■□□□□ 0.95
SPSB4-201ENST00000310546 TBC1D8O95759 1140 aa21.01■□□□□ 0.95
SPSB4-201ENST00000310546 GNL2Q13823 731 aaKnown RBP21.01■□□□□ 0.95
SPSB4-201ENST00000310546 CREB3L3Q68CJ9 461 aa21.01■□□□□ 0.95
SPSB4-201ENST00000310546 CCAR1Q8IX12 1150 aaKnown RBP21.01■□□□□ 0.95
SPSB4-201ENST00000310546 CEP57L1Q8IYX8 460 aa21.01■□□□□ 0.95
SPSB4-201ENST00000310546 GNAT3A8MTJ3 354 aa21■□□□□ 0.95
SPSB4-201ENST00000310546 H3BQV1 296 aa21■□□□□ 0.95
SPSB4-201ENST00000310546 ETF1P62495 437 aaKnown RBP21■□□□□ 0.95
SPSB4-201ENST00000310546 NECTIN1Q15223 517 aa21■□□□□ 0.95
SPSB4-201ENST00000310546 IFFO2Q5TF58 517 aa21■□□□□ 0.95
SPSB4-201ENST00000310546 SSH3Q8TE77 659 aa21■□□□□ 0.95
SPSB4-201ENST00000310546 FMNL2Q96PY5 1086 aa21■□□□□ 0.95
SPSB4-201ENST00000310546 ANO10Q9NW15 660 aa21■□□□□ 0.95
SPSB4-201ENST00000310546 JAK2O60674 1132 aa21■□□□□ 0.95
SPSB4-201ENST00000310546 EIF2S2P20042 333 aaKnown RBP21■□□□□ 0.95
SPSB4-201ENST00000310546 FAM177A1Q8N128 213 aaPredicted RBP21■□□□□ 0.95
SPSB4-201ENST00000310546 AK7Q96M32 723 aa21■□□□□ 0.95
SPSB4-201ENST00000310546 FTOQ9C0B1 505 aaKnown RBP eCLIP21■□□□□ 0.95
SPSB4-201ENST00000310546 RRP15Q9Y3B9 282 aaKnown RBP21■□□□□ 0.95
SPSB4-201ENST00000310546 BRINP3Q76B58 766 aa20.99■□□□□ 0.95
SPSB4-201ENST00000310546 OSBPL5Q9H0X9 879 aaPredicted RBP20.99■□□□□ 0.95
SPSB4-201ENST00000310546 SLAIN2Q9P270 581 aa20.99■□□□□ 0.95
SPSB4-201ENST00000310546 PSDA5PKW4 1024 aaPredicted RBP20.99■□□□□ 0.95
SPSB4-201ENST00000310546 KCNQ3O43525 872 aa20.99■□□□□ 0.95
SPSB4-201ENST00000310546 NRDCO43847 1150 aa20.99■□□□□ 0.95
SPSB4-201ENST00000310546 KINO60870 393 aaKnown RBP20.99■□□□□ 0.95
SPSB4-201ENST00000310546 FOSBP53539 338 aa20.99■□□□□ 0.95
SPSB4-201ENST00000310546 EVCP57679 992 aa20.99■□□□□ 0.95
SPSB4-201ENST00000310546 OS9Q13438 667 aaPredicted RBP20.99■□□□□ 0.95
SPSB4-201ENST00000310546 SRLQ86TD4 932 aa20.99■□□□□ 0.95
SPSB4-201ENST00000310546 XPO4Q9C0E2 1151 aaKnown RBP20.99■□□□□ 0.95
SPSB4-201ENST00000310546 BLOC1S2Q6QNY1 142 aa20.98■□□□□ 0.95
SPSB4-201ENST00000310546 IFNKQ9P0W0 207 aa20.98■□□□□ 0.95
SPSB4-201ENST00000310546 ADAM21Q9UKJ8 722 aa20.98■□□□□ 0.95
SPSB4-201ENST00000310546 BRF1Q92994 677 aa20.98■□□□□ 0.95
SPSB4-201ENST00000310546 CFAP45Q9UL16 551 aa20.98■□□□□ 0.95
SPSB4-201ENST00000310546 CTAGE5O15320 804 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms