RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 NLRP3Q96P20 1036 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 ORAI2Q96SN7 254 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 CNNM2Q9H8M5 875 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 SBNO2Q9Y2G9 1366 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 YEATS4O95619 227 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 ATP7AQ04656 1500 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 IRS4O14654 1257 aaPredicted RBP11.4□□□□□ -0.58
TMOD3-201ENST00000308580 TMTC2Q8N394 836 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 KLHDC4Q8TBB5 520 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 DNAJC25Q9H1X3 360 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 MAGI3Q5TCQ9 1506 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 CASQ1P31415 396 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 NAA16Q6N069 864 aaPredicted RBP11.4□□□□□ -0.58
TMOD3-201ENST00000308580 ZNF790Q6PG37 636 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 CCDC171Q6TFL3 1326 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 HSP90AA4PQ58FG1 418 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 KANK3Q6NY19 840 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 DNA2P51530 1060 aa11.4□□□□□ -0.59
TMOD3-201ENST00000308580 TDRD12Q587J7 1177 aaKnown RBP11.4□□□□□ -0.59
TMOD3-201ENST00000308580 CCDC186Q7Z3E2 898 aa11.4□□□□□ -0.59
TMOD3-201ENST00000308580 SYT1P21579 422 aa11.39□□□□□ -0.59
TMOD3-201ENST00000308580 CALML4Q96GE6 196 aa11.39□□□□□ -0.59
TMOD3-201ENST00000308580 TIMM10P62072 90 aa11.39□□□□□ -0.59
TMOD3-201ENST00000308580 TNIP1Q15025 636 aa11.39□□□□□ -0.59
TMOD3-201ENST00000308580 IFIT1BQ5T764 474 aaKnown RBP11.39□□□□□ -0.59
TMOD3-201ENST00000308580 SETDB2Q96T68 719 aa11.39□□□□□ -0.59
TMOD3-201ENST00000308580 MATR3P43243 847 aaKnown RBP eCLIP11.39□□□□□ -0.595e-6■■□□□ 12.5
TMOD3-201ENST00000308580 DHX32Q7L7V1 743 aaKnown RBP11.39□□□□□ -0.59
TMOD3-201ENST00000308580 UTP14AQ9BVJ6 771 aaKnown RBP11.39□□□□□ -0.59
TMOD3-201ENST00000308580 USP19O94966 1318 aa11.39□□□□□ -0.59
TMOD3-201ENST00000308580 NBPF7P0C2Y1 421 aaPredicted RBP11.39□□□□□ -0.59
TMOD3-201ENST00000308580 RUFY3Q7L099 469 aa11.39□□□□□ -0.59
TMOD3-201ENST00000308580 CUL5Q93034 780 aa11.39□□□□□ -0.59
TMOD3-201ENST00000308580 RAD50Q92878 1312 aa11.39□□□□□ -0.59
TMOD3-201ENST00000308580 PNMA6EA0A0J9YXQ4 647 aa11.39□□□□□ -0.59
TMOD3-201ENST00000308580 AFMP43652 599 aa11.39□□□□□ -0.59
TMOD3-201ENST00000308580 SPATA31E1Q6ZUB1 1445 aa11.39□□□□□ -0.59
TMOD3-201ENST00000308580 FGFR1OPO95684 399 aaKnown RBP11.39□□□□□ -0.59
TMOD3-201ENST00000308580 BLMP54132 1417 aaPredicted RBP11.39□□□□□ -0.59
TMOD3-201ENST00000308580 PTPDC1A2A3K4 754 aa11.38□□□□□ -0.59
TMOD3-201ENST00000308580 NEFHP12036 1026 aa11.38□□□□□ -0.59
TMOD3-201ENST00000308580 CRACR2AQ9BSW2 395 aa11.38□□□□□ -0.59
TMOD3-201ENST00000308580 GBP3Q9H0R5 595 aa11.38□□□□□ -0.59
TMOD3-201ENST00000308580 KIF20AO95235 890 aa11.38□□□□□ -0.59
TMOD3-201ENST00000308580 SNW1Q13573 536 aaKnown RBP11.38□□□□□ -0.59
TMOD3-201ENST00000308580 MIGA1Q8NAN2 632 aa11.38□□□□□ -0.59
TMOD3-201ENST00000308580 FAM89AQ96GI7 184 aa11.38□□□□□ -0.59
TMOD3-201ENST00000308580 N4BP3O15049 544 aa11.38□□□□□ -0.59
TMOD3-201ENST00000308580 SPTLC2O15270 562 aa11.38□□□□□ -0.59
TMOD3-201ENST00000308580 CBX1P83916 185 aa11.38□□□□□ -0.59
TMOD3-201ENST00000308580 BABAM1Q9NWV8 329 aa11.38□□□□□ -0.59
TMOD3-201ENST00000308580 AMPD3Q01432 767 aa11.38□□□□□ -0.59
TMOD3-201ENST00000308580 TRMT1LQ7Z2T5 733 aaKnown RBP11.38□□□□□ -0.59
TMOD3-201ENST00000308580 DBNDD2Q9BQY9 259 aa11.38□□□□□ -0.59
TMOD3-201ENST00000308580 HOXB7P09629 217 aa11.37□□□□□ -0.59
TMOD3-201ENST00000308580 TAX1BP1Q86VP1 789 aa11.37□□□□□ -0.59
TMOD3-201ENST00000308580 TTC12Q9H892 705 aaPredicted RBP11.37□□□□□ -0.59
TMOD3-201ENST00000308580 TSPY3P0CV98 308 aa11.37□□□□□ -0.59
TMOD3-201ENST00000308580 TSPY8P0CW00 308 aa11.37□□□□□ -0.59
TMOD3-201ENST00000308580 SSR1P43307 286 aaKnown RBP11.37□□□□□ -0.59
TMOD3-201ENST00000308580 UBASH3AP57075 661 aa11.37□□□□□ -0.59
TMOD3-201ENST00000308580 SMARCC1Q92922 1105 aaPredicted RBP11.37□□□□□ -0.59
TMOD3-201ENST00000308580 HLA-DOAP06340 250 aa11.37□□□□□ -0.59
TMOD3-201ENST00000308580 CCDC40Q4G0X9 1142 aa11.37□□□□□ -0.59
TMOD3-201ENST00000308580 TAF3Q5VWG9 929 aa11.37□□□□□ -0.59
TMOD3-201ENST00000308580 AOPEPQ8N6M6 819 aa11.37□□□□□ -0.59
TMOD3-201ENST00000308580 VPS36Q86VN1 386 aa11.37□□□□□ -0.59
TMOD3-201ENST00000308580 ERICH4A6NGS2 130 aa11.37□□□□□ -0.59
TMOD3-201ENST00000308580 TYRO3Q06418 890 aa11.37□□□□□ -0.59
TMOD3-201ENST00000308580 TCERG1LQ5VWI1 586 aa11.37□□□□□ -0.59
TMOD3-201ENST00000308580 ZNF622Q969S3 477 aaKnown RBP eCLIP11.37□□□□□ -0.59
TMOD3-201ENST00000308580 PYM1Q9BRP8 204 aaKnown RBP11.37□□□□□ -0.59
TMOD3-201ENST00000308580 KIF21AQ7Z4S6 1674 aa11.37□□□□□ -0.59
TMOD3-201ENST00000308580 USO1O60763 962 aaKnown RBP11.37□□□□□ -0.59
TMOD3-201ENST00000308580 INSRP06213 1382 aa11.37□□□□□ -0.59
TMOD3-201ENST00000308580 SKILP12757 684 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 RXRAP19793 462 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 JAKMIP3Q5VZ66 844 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 CCDC129Q6ZRS4 1044 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 METTL22Q9BUU2 404 aaPredicted RBP11.36□□□□□ -0.59
TMOD3-201ENST00000308580 EYA2O00167 538 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 CLCN1P35523 988 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 GSTO1P78417 241 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 CCDC150Q8NCX0 1101 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 SAMD9Q5K651 1589 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 GNG11P61952 73 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 TRIM47Q96LD4 638 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 MAGEB6Q8N7X4 407 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 BMP15O95972 392 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 RRAGBQ5VZM2 374 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 FEZ1Q99689 392 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 PCDH11XQ9BZA7 1347 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 PCDH11YQ9BZA8 1340 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 F8W031 263 aaPredicted RBP11.36□□□□□ -0.59
TMOD3-201ENST00000308580 NOLC1Q14978 699 aaKnown RBP eCLIP11.36□□□□□ -0.59
TMOD3-201ENST00000308580 A0A1B0GUL7 405 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 CABP5Q9NP86 173 aa11.36□□□□□ -0.59
TMOD3-201ENST00000308580 MAGEB6P1A0A0J9YX57 407 aa11.35□□□□□ -0.59
TMOD3-201ENST00000308580 TNNI3KQ59H18 835 aa11.35□□□□□ -0.59
TMOD3-201ENST00000308580 PLBD2Q8NHP8 589 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms