RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 RUFY3Q7L099 469 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 CCDC102AQ96A19 550 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 SYTL4Q96C24 671 aaPredicted RBP12.18□□□□□ -0.46
MSRB3-201ENST00000308259 NBPF4Q96M43 638 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 CLIP2Q9UDT6 1046 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 TECPR2O15040 1411 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 OAS2P29728 719 aaKnown RBP12.18□□□□□ -0.46
MSRB3-201ENST00000308259 PROSER3Q2NL68 480 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 PPM1EQ8WY54 764 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 SIL1Q9H173 461 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 SLC24A3Q9HC58 644 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 STAP2Q9UGK3 403 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 REREQ9P2R6 1566 aa12.18□□□□□ -0.46
MSRB3-201ENST00000308259 TULP2O00295 520 aa12.17□□□□□ -0.46
MSRB3-201ENST00000308259 IVLP07476 585 aa12.17□□□□□ -0.46
MSRB3-201ENST00000308259 MCM2P49736 904 aa12.17□□□□□ -0.46
MSRB3-201ENST00000308259 GBP6Q6ZN66 633 aa12.17□□□□□ -0.46
MSRB3-201ENST00000308259 SSH3Q8TE77 659 aa12.17□□□□□ -0.46
MSRB3-201ENST00000308259 ERO1AQ96HE7 468 aa12.17□□□□□ -0.46
MSRB3-201ENST00000308259 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.17□□□□□ -0.46
MSRB3-201ENST00000308259 TMEM94Q12767 1356 aa12.17□□□□□ -0.46
MSRB3-201ENST00000308259 MAP3K5Q99683 1374 aa12.17□□□□□ -0.46
MSRB3-201ENST00000308259 VPS37CA5D8V6 355 aaPredicted RBP12.17□□□□□ -0.46
MSRB3-201ENST00000308259 FAM173BQ6P4H8 233 aa12.17□□□□□ -0.46
MSRB3-201ENST00000308259 SGSM2O43147 1006 aa12.17□□□□□ -0.46
MSRB3-201ENST00000308259 URI1O94763 535 aaPredicted RBP12.17□□□□□ -0.46
MSRB3-201ENST00000308259 FERMT3Q86UX7 667 aa12.17□□□□□ -0.46
MSRB3-201ENST00000308259 JAKMIP1Q96N16 626 aaKnown RBP12.17□□□□□ -0.46
MSRB3-201ENST00000308259 ZCCHC17Q9NP64 241 aaKnown RBP12.17□□□□□ -0.46
MSRB3-201ENST00000308259 PDRG1Q9NUG6 133 aa12.17□□□□□ -0.46
MSRB3-201ENST00000308259 NRKQ7Z2Y5 1582 aa12.16□□□□□ -0.46
MSRB3-201ENST00000308259 ADAMTS2O95450 1211 aa12.16□□□□□ -0.46
MSRB3-201ENST00000308259 SYT1P21579 422 aa12.16□□□□□ -0.46
MSRB3-201ENST00000308259 KDRP35968 1356 aa12.16□□□□□ -0.46
MSRB3-201ENST00000308259 AKAP12Q02952 1782 aa12.16□□□□□ -0.46
MSRB3-201ENST00000308259 KLHDC4Q8TBB5 520 aa12.16□□□□□ -0.46
MSRB3-201ENST00000308259 LSG1Q9H089 658 aaKnown RBP12.16□□□□□ -0.46
MSRB3-201ENST00000308259 C9orf78Q9NZ63 289 aaPredicted RBP12.16□□□□□ -0.46
MSRB3-201ENST00000308259 SMC3Q9UQE7 1217 aa12.16□□□□□ -0.46
MSRB3-201ENST00000308259 WDR33Q9C0J8 1336 aaKnown RBP12.16□□□□□ -0.46
MSRB3-201ENST00000308259 CCDC8Q9H0W5 538 aaPredicted RBP12.16□□□□□ -0.46
MSRB3-201ENST00000308259 VPS18Q9P253 973 aa12.16□□□□□ -0.46
MSRB3-201ENST00000308259 KIF2AO00139 706 aaPredicted RBP12.15□□□□□ -0.46
MSRB3-201ENST00000308259 MMP14P50281 582 aa12.15□□□□□ -0.46
MSRB3-201ENST00000308259 ANAPC15P60006 121 aa12.15□□□□□ -0.46
MSRB3-201ENST00000308259 DNM1Q05193 864 aaKnown RBP12.15□□□□□ -0.46
MSRB3-201ENST00000308259 MCM6Q14566 821 aa12.15□□□□□ -0.46
MSRB3-201ENST00000308259 CKAP2LQ8IYA6 745 aa12.15□□□□□ -0.46
MSRB3-201ENST00000308259 CNTROBQ8N137 903 aa12.15□□□□□ -0.46
MSRB3-201ENST00000308259 ZNF513Q8N8E2 541 aaPredicted RBP12.15□□□□□ -0.46
MSRB3-201ENST00000308259 TMX4Q9H1E5 349 aaPredicted RBP12.15□□□□□ -0.46
MSRB3-201ENST00000308259 ATP6V1DQ9Y5K8 247 aa12.15□□□□□ -0.46
MSRB3-201ENST00000308259 RPAP1Q9BWH6 1393 aaPredicted RBP12.15□□□□□ -0.46
MSRB3-201ENST00000308259 PHACTR2O75167 634 aa12.15□□□□□ -0.46
MSRB3-201ENST00000308259 KIF1BPQ96EK5 621 aa12.15□□□□□ -0.46
MSRB3-201ENST00000308259 ACBD3Q9H3P7 528 aa12.15□□□□□ -0.46
MSRB3-201ENST00000308259 BTBD11A6QL63 1104 aa12.15□□□□□ -0.46
MSRB3-201ENST00000308259 PIP4K2AP48426 406 aaPredicted RBP12.15□□□□□ -0.46
MSRB3-201ENST00000308259 AMOTQ4VCS5 1084 aa12.15□□□□□ -0.46
MSRB3-201ENST00000308259 INTS4Q96HW7 963 aaKnown RBP12.15□□□□□ -0.46
MSRB3-201ENST00000308259 ZNF330Q9Y3S2 320 aaPredicted RBP12.15□□□□□ -0.46
MSRB3-201ENST00000308259 STX6O43752 255 aa12.14□□□□□ -0.47
MSRB3-201ENST00000308259 EIF4A1P60842 406 aaKnown RBP12.14□□□□□ -0.47
MSRB3-201ENST00000308259 BEND3Q5T5X7 828 aa12.14□□□□□ -0.47
MSRB3-201ENST00000308259 SPTLC3Q9NUV7 552 aa12.14□□□□□ -0.47
MSRB3-201ENST00000308259 RAI14Q9P0K7 980 aa12.14□□□□□ -0.47
MSRB3-201ENST00000308259 MAP3K2Q9Y2U5 619 aa12.14□□□□□ -0.47
MSRB3-201ENST00000308259 NDUFB9Q9Y6M9 179 aa12.14□□□□□ -0.47
MSRB3-201ENST00000308259 RAD50Q92878 1312 aa12.14□□□□□ -0.47
MSRB3-201ENST00000308259 MAP2K1Q02750 393 aaPredicted RBP12.14□□□□□ -0.47
MSRB3-201ENST00000308259 ZNF530Q6P9A1 599 aaPredicted RBP12.14□□□□□ -0.47
MSRB3-201ENST00000308259 FAM227BQ96M60 508 aa12.14□□□□□ -0.47
MSRB3-201ENST00000308259 SSH2Q76I76 1423 aa12.14□□□□□ -0.47
MSRB3-201ENST00000308259 GJB2P29033 226 aa12.14□□□□□ -0.47
MSRB3-201ENST00000308259 NF2P35240 595 aa12.14□□□□□ -0.47
MSRB3-201ENST00000308259 PRPF38AQ8NAV1 312 aaKnown RBP12.14□□□□□ -0.47
MSRB3-201ENST00000308259 ZSCAN22P10073 491 aaPredicted RBP12.14□□□□□ -0.47
MSRB3-201ENST00000308259 AACSQ86V21 672 aa12.14□□□□□ -0.47
MSRB3-201ENST00000308259 BICD2Q8TD16 824 aa12.14□□□□□ -0.47
MSRB3-201ENST00000308259 SMARCE1Q969G3 411 aa12.14□□□□□ -0.47
MSRB3-201ENST00000308259 LCMT1Q9UIC8 334 aa12.14□□□□□ -0.47
MSRB3-201ENST00000308259 SKILP12757 684 aa12.13□□□□□ -0.47
MSRB3-201ENST00000308259 STK3Q13188 491 aa12.13□□□□□ -0.47
MSRB3-201ENST00000308259 TAF6LQ9Y6J9 622 aa12.13□□□□□ -0.47
MSRB3-201ENST00000308259 EDC3Q96F86 508 aaKnown RBP12.13□□□□□ -0.47
MSRB3-201ENST00000308259 CARD10Q9BWT7 1032 aa12.13□□□□□ -0.47
MSRB3-201ENST00000308259 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.13□□□□□ -0.47
MSRB3-201ENST00000308259 LIMCH1Q9UPQ0 1083 aa12.13□□□□□ -0.47
MSRB3-201ENST00000308259 CTIFO43310 598 aaKnown RBP12.13□□□□□ -0.47
MSRB3-201ENST00000308259 SNW1Q13573 536 aaKnown RBP12.13□□□□□ -0.47
MSRB3-201ENST00000308259 TLR7Q9NYK1 1049 aaKnown RBP12.13□□□□□ -0.47
MSRB3-201ENST00000308259 PPFIA3O75145 1194 aa12.12□□□□□ -0.47
MSRB3-201ENST00000308259 SMC2O95347 1197 aa12.12□□□□□ -0.47
MSRB3-201ENST00000308259 CHGBP05060 677 aa12.12□□□□□ -0.47
MSRB3-201ENST00000308259 IFIT2P09913 472 aaKnown RBP12.12□□□□□ -0.47
MSRB3-201ENST00000308259 ATP2B1P20020 1258 aa12.12□□□□□ -0.47
MSRB3-201ENST00000308259 ST5P78524 1137 aa12.12□□□□□ -0.47
MSRB3-201ENST00000308259 POLA2Q14181 598 aa12.12□□□□□ -0.47
MSRB3-201ENST00000308259 MCTP2Q6DN12 878 aa12.12□□□□□ -0.47
MSRB3-201ENST00000308259 NOP2P46087 812 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms