RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 ZNF652Q9Y2D9 606 aa14.42□□□□□ -0.1
TRIM40-205ENST00000307859 PNPLA7Q6ZV29 1317 aa14.42□□□□□ -0.1
TRIM40-205ENST00000307859 SH3TC1Q8TE82 1336 aa14.42□□□□□ -0.1
TRIM40-205ENST00000307859 RFX7Q2KHR2 1363 aa14.42□□□□□ -0.1
TRIM40-205ENST00000307859 HIP1O00291 1037 aa14.41□□□□□ -0.1
TRIM40-205ENST00000307859 KIF3CO14782 793 aa14.41□□□□□ -0.1
TRIM40-205ENST00000307859 UTP14AQ9BVJ6 771 aaKnown RBP14.41□□□□□ -0.1
TRIM40-205ENST00000307859 BOLA2Q9H3K6 86 aa14.41□□□□□ -0.1
TRIM40-205ENST00000307859 GREM2Q9H772 168 aa14.41□□□□□ -0.1
TRIM40-205ENST00000307859 ANO2Q9NQ90 1003 aa14.41□□□□□ -0.1
TRIM40-205ENST00000307859 DIAPH3Q9NSV4 1193 aa14.41□□□□□ -0.1
TRIM40-205ENST00000307859 LRRC4BQ9NT99 713 aa14.41□□□□□ -0.1
TRIM40-205ENST00000307859 NTSR2O95665 410 aa14.41□□□□□ -0.1
TRIM40-205ENST00000307859 ANAPC15P60006 121 aa14.41□□□□□ -0.1
TRIM40-205ENST00000307859 RUFY2Q8WXA3 655 aa14.41□□□□□ -0.1
TRIM40-205ENST00000307859 RAD50Q92878 1312 aa14.41□□□□□ -0.1
TRIM40-205ENST00000307859 ANTXR1Q9H6X2 564 aa14.41□□□□□ -0.1
TRIM40-205ENST00000307859 RTL9Q8NET4 1388 aa14.4□□□□□ -0.1
TRIM40-205ENST00000307859 ANKRD18BA2A2Z9 1011 aa14.4□□□□□ -0.1
TRIM40-205ENST00000307859 RPS6KA4O75676 772 aa14.4□□□□□ -0.1
TRIM40-205ENST00000307859 ITGA6P23229 1130 aa14.4□□□□□ -0.1
TRIM40-205ENST00000307859 MCCP23508 829 aa14.4□□□□□ -0.1
TRIM40-205ENST00000307859 KCNQ4P56696 695 aa14.4□□□□□ -0.1
TRIM40-205ENST00000307859 TAF7LQ5H9L4 462 aa14.4□□□□□ -0.1
TRIM40-205ENST00000307859 COL13A1Q5TAT6 717 aaPredicted RBP14.4□□□□□ -0.1
TRIM40-205ENST00000307859 HAUS7Q99871 368 aa14.4□□□□□ -0.1
TRIM40-205ENST00000307859 SNRKQ9NRH2 765 aa14.4□□□□□ -0.1
TRIM40-205ENST00000307859 CEP126Q9P2H0 1117 aa14.4□□□□□ -0.1
TRIM40-205ENST00000307859 CCNL1Q9UK58 526 aaPredicted RBP14.4□□□□□ -0.1
TRIM40-205ENST00000307859 NIP7Q9Y221 180 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRIM40-205ENST00000307859 A0A1B0GUL7 405 aa14.39□□□□□ -0.11
TRIM40-205ENST00000307859 CD2BP2O95400 341 aaKnown RBP14.39□□□□□ -0.11
TRIM40-205ENST00000307859 CWC27Q6UX04 472 aaKnown RBP14.39□□□□□ -0.11
TRIM40-205ENST00000307859 ZNF526Q8TF50 670 aaPredicted RBP14.39□□□□□ -0.11
TRIM40-205ENST00000307859 CCDC85AQ96PX6 553 aaPredicted RBP14.39□□□□□ -0.11
TRIM40-205ENST00000307859 LSG1Q9H089 658 aaKnown RBP14.39□□□□□ -0.11
TRIM40-205ENST00000307859 RIPOR2Q9Y4F9 1068 aa14.39□□□□□ -0.11
TRIM40-205ENST00000307859 TAF1P21675 1872 aa14.38□□□□□ -0.11
TRIM40-205ENST00000307859 SLC34A2O95436 690 aa14.38□□□□□ -0.11
TRIM40-205ENST00000307859 HSP90B1P14625 803 aaKnown RBP14.38□□□□□ -0.11
TRIM40-205ENST00000307859 HSPA4P34932 840 aa14.38□□□□□ -0.11
TRIM40-205ENST00000307859 TNS4Q8IZW8 715 aa14.38□□□□□ -0.11
TRIM40-205ENST00000307859 AKAP2Q9Y2D5 859 aa14.38□□□□□ -0.11
TRIM40-205ENST00000307859 CD2APQ9Y5K6 639 aa14.38□□□□□ -0.11
TRIM40-205ENST00000307859 ABCC12Q96J65 1359 aa14.38□□□□□ -0.11
TRIM40-205ENST00000307859 K7ELQ4 463 aaPredicted RBP14.37□□□□□ -0.11
TRIM40-205ENST00000307859 CAPN15O75808 1086 aa14.37□□□□□ -0.11
TRIM40-205ENST00000307859 TIMM10P62072 90 aa14.37□□□□□ -0.11
TRIM40-205ENST00000307859 JMYQ8N9B5 988 aa14.37□□□□□ -0.11
TRIM40-205ENST00000307859 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRIM40-205ENST00000307859 FSD1Q9BTV5 496 aa14.37□□□□□ -0.11
TRIM40-205ENST00000307859 TFCP2L1Q9NZI6 479 aa14.37□□□□□ -0.11
TRIM40-205ENST00000307859 NARFQ9UHQ1 456 aa14.37□□□□□ -0.11
TRIM40-205ENST00000307859 MYO5AQ9Y4I1 1855 aaKnown RBP14.37□□□□□ -0.11
TRIM40-205ENST00000307859 MED23Q9ULK4 1368 aa14.37□□□□□ -0.11
TRIM40-205ENST00000307859 TICAM2Q86XR7 235 aa14.37□□□□□ -0.11
TRIM40-205ENST00000307859 VGLL2Q8N8G2 317 aa14.37□□□□□ -0.11
TRIM40-205ENST00000307859 NEUROD6Q96NK8 337 aa14.37□□□□□ -0.11
TRIM40-205ENST00000307859 BCL2L12Q9HB09 334 aa14.37□□□□□ -0.11
TRIM40-205ENST00000307859 PALD1Q9ULE6 856 aa14.37□□□□□ -0.11
TRIM40-205ENST00000307859 GNPATO15228 680 aa14.36□□□□□ -0.11
TRIM40-205ENST00000307859 TOMM70O94826 608 aa14.36□□□□□ -0.11
TRIM40-205ENST00000307859 HCLS1P14317 486 aaPredicted RBP14.36□□□□□ -0.11
TRIM40-205ENST00000307859 NMIQ13287 307 aaPredicted RBP14.36□□□□□ -0.11
TRIM40-205ENST00000307859 LDHAL6AQ6ZMR3 332 aa14.36□□□□□ -0.11
TRIM40-205ENST00000307859 SLKQ9H2G2 1235 aaPredicted RBP14.36□□□□□ -0.11
TRIM40-205ENST00000307859 COL4A1P02462 1669 aa14.35□□□□□ -0.11
TRIM40-205ENST00000307859 DOCK2Q92608 1830 aa14.35□□□□□ -0.11
TRIM40-205ENST00000307859 KIAA1211Q6ZU35 1233 aa14.35□□□□□ -0.11
TRIM40-205ENST00000307859 IL27Q8NEV9 243 aa14.35□□□□□ -0.11
TRIM40-205ENST00000307859 EDC3Q96F86 508 aaKnown RBP14.35□□□□□ -0.11
TRIM40-205ENST00000307859 FAM227BQ96M60 508 aa14.35□□□□□ -0.11
TRIM40-205ENST00000307859 RTCBQ9Y3I0 505 aaKnown RBP14.35□□□□□ -0.11
TRIM40-205ENST00000307859 FAM177BA6PVY3 158 aa14.34□□□□□ -0.11
TRIM40-205ENST00000307859 ST18O60284 1047 aa14.34□□□□□ -0.11
TRIM40-205ENST00000307859 DDIT3P35638 169 aa14.34□□□□□ -0.11
TRIM40-205ENST00000307859 METTL24Q5JXM2 366 aa14.34□□□□□ -0.11
TRIM40-205ENST00000307859 XAGE2Q96GT9 111 aa14.34□□□□□ -0.11
TRIM40-205ENST00000307859 CNNM1Q9NRU3 951 aa14.34□□□□□ -0.11
TRIM40-205ENST00000307859 CCDC171Q6TFL3 1326 aa14.34□□□□□ -0.11
TRIM40-205ENST00000307859 A0A0D9SFI3 127 aa14.33□□□□□ -0.11
TRIM40-205ENST00000307859 ATP2B3Q16720 1220 aa14.33□□□□□ -0.11
TRIM40-205ENST00000307859 CCDC152Q4G0S7 254 aa14.33□□□□□ -0.11
TRIM40-205ENST00000307859 USPL1Q5W0Q7 1092 aa14.33□□□□□ -0.11
TRIM40-205ENST00000307859 KBTBD3Q8NAB2 608 aa14.33□□□□□ -0.11
TRIM40-205ENST00000307859 KLRG1Q96E93 195 aa14.33□□□□□ -0.11
TRIM40-205ENST00000307859 DNAJC2Q99543 621 aaKnown RBP14.33□□□□□ -0.11
TRIM40-205ENST00000307859 MROH5Q6ZUA9 1318 aa14.33□□□□□ -0.12
TRIM40-205ENST00000307859 PDE8BO95263 885 aa14.33□□□□□ -0.12
TRIM40-205ENST00000307859 IFIT1P09914 478 aaKnown RBP14.33□□□□□ -0.12
TRIM40-205ENST00000307859 ADORA1P30542 326 aa14.33□□□□□ -0.12
TRIM40-205ENST00000307859 PTH1RQ03431 593 aa14.33□□□□□ -0.12
TRIM40-205ENST00000307859 TBC1D9BQ66K14 1250 aa14.33□□□□□ -0.12
TRIM40-205ENST00000307859 AMIGO3Q86WK7 504 aa14.33□□□□□ -0.12
TRIM40-205ENST00000307859 KCNB2Q92953 911 aa14.33□□□□□ -0.12
TRIM40-205ENST00000307859 PAG1Q9NWQ8 432 aa14.33□□□□□ -0.12
TRIM40-205ENST00000307859 NDUFB9Q9Y6M9 179 aa14.33□□□□□ -0.12
TRIM40-205ENST00000307859 LAMA4Q16363 1823 aa14.32□□□□□ -0.12
TRIM40-205ENST00000307859 TNRC6CQ9HCJ0 1690 aaKnown RBP14.32□□□□□ -0.12
TRIM40-205ENST00000307859 CCDC158Q5M9N0 1113 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms