RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 DNM1Q05193 864 aaKnown RBP8.61□□□□□ -1.03
RGPD3-201ENST00000304514 PLA2G12BQ9BX93 195 aa8.61□□□□□ -1.03
RGPD3-201ENST00000304514 MCMDC2Q4G0Z9 681 aa8.61□□□□□ -1.03
RGPD3-201ENST00000304514 GTF3C6Q969F1 213 aa8.61□□□□□ -1.03
RGPD3-201ENST00000304514 SEC62Q99442 399 aaKnown RBP8.61□□□□□ -1.03
RGPD3-201ENST00000304514 LAMB1P07942 1786 aa8.61□□□□□ -1.03
RGPD3-201ENST00000304514 SALL1Q9NSC2 1324 aa8.61□□□□□ -1.03
RGPD3-201ENST00000304514 IL2RBP14784 551 aa8.61□□□□□ -1.03
RGPD3-201ENST00000304514 UVSSAQ2YD98 709 aa8.61□□□□□ -1.03
RGPD3-201ENST00000304514 CCDC191Q8NCU4 936 aa8.61□□□□□ -1.03
RGPD3-201ENST00000304514 DDX54Q8TDD1 881 aaKnown RBP8.61□□□□□ -1.03
RGPD3-201ENST00000304514 M0R2C6 588 aa8.61□□□□□ -1.03
RGPD3-201ENST00000304514 RNF20Q5VTR2 975 aa8.61□□□□□ -1.03
RGPD3-201ENST00000304514 LMBR1LQ6UX01 489 aa8.61□□□□□ -1.03
RGPD3-201ENST00000304514 COL24A1Q17RW2 1714 aa8.61□□□□□ -1.03
RGPD3-201ENST00000304514 U3KPZ7 1027 aaPredicted RBP8.6□□□□□ -1.03
RGPD3-201ENST00000304514 SBF2Q86WG5 1849 aa8.6□□□□□ -1.03
RGPD3-201ENST00000304514 FOXP2O15409 715 aa8.6□□□□□ -1.03
RGPD3-201ENST00000304514 DTNBO60941 627 aa8.6□□□□□ -1.03
RGPD3-201ENST00000304514 FOXD4L6Q3SYB3 417 aaPredicted RBP8.6□□□□□ -1.03
RGPD3-201ENST00000304514 LRRC24Q50LG9 513 aa8.6□□□□□ -1.03
RGPD3-201ENST00000304514 FOXD4L3Q6VB84 417 aaPredicted RBP8.6□□□□□ -1.03
RGPD3-201ENST00000304514 AGXT2Q9BYV1 514 aa8.6□□□□□ -1.03
RGPD3-201ENST00000304514 MAST2Q6P0Q8 1798 aa8.6□□□□□ -1.03
RGPD3-201ENST00000304514 ZMYM1Q5SVZ6 1142 aa8.6□□□□□ -1.03
RGPD3-201ENST00000304514 KBTBD3Q8NAB2 608 aa8.6□□□□□ -1.03
RGPD3-201ENST00000304514 DSCC1Q9BVC3 393 aa8.6□□□□□ -1.03
RGPD3-201ENST00000304514 PAG1Q9NWQ8 432 aa8.6□□□□□ -1.03
RGPD3-201ENST00000304514 CYP21A2P08686 494 aa8.6□□□□□ -1.03
RGPD3-201ENST00000304514 SMARCC2Q8TAQ2 1214 aa8.6□□□□□ -1.03
RGPD3-201ENST00000304514 BCL9O00512 1426 aa8.6□□□□□ -1.03
RGPD3-201ENST00000304514 A0A0G2JLW4 131 aa8.59□□□□□ -1.03
RGPD3-201ENST00000304514 A1BGP04217 495 aa8.59□□□□□ -1.03
RGPD3-201ENST00000304514 PDIA4P13667 645 aaKnown RBP8.59□□□□□ -1.03
RGPD3-201ENST00000304514 EXOSC10Q01780 885 aaKnown RBP8.59□□□□□ -1.03
RGPD3-201ENST00000304514 BLOC1S2Q6QNY1 142 aa8.59□□□□□ -1.03
RGPD3-201ENST00000304514 DNAJC2Q99543 621 aaKnown RBP8.59□□□□□ -1.03
RGPD3-201ENST00000304514 ATP6V1DQ9Y5K8 247 aa8.59□□□□□ -1.03
RGPD3-201ENST00000304514 SLFNL1Q499Z3 407 aa8.59□□□□□ -1.03
RGPD3-201ENST00000304514 CCDC39Q9UFE4 941 aa8.59□□□□□ -1.03
RGPD3-201ENST00000304514 KRT32Q14532 448 aa8.59□□□□□ -1.03
RGPD3-201ENST00000304514 RBM43Q6ZSC3 357 aaKnown RBP8.59□□□□□ -1.03
RGPD3-201ENST00000304514 FBXL16Q8N461 479 aa8.59□□□□□ -1.03
RGPD3-201ENST00000304514 IL15P40933 162 aaPredicted RBP8.59□□□□□ -1.03
RGPD3-201ENST00000304514 RESTQ13127 1097 aa8.59□□□□□ -1.03
RGPD3-201ENST00000304514 Q6ZUG5 572 aa8.59□□□□□ -1.03
RGPD3-201ENST00000304514 OFD1O75665 1012 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 CTDNEP1O95476 244 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 SCRN1Q12765 414 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 TOM1L2Q6ZVM7 507 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 NEK1Q96PY6 1258 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 MAST3O60307 1309 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 PFKFB2O60825 505 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 CSF1RP07333 972 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 MCM5P33992 734 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 CSPP1Q1MSJ5 1256 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 DDX46Q7L014 1031 aaKnown RBP8.58□□□□□ -1.04
RGPD3-201ENST00000304514 ANP32BQ92688 251 aaKnown RBP8.58□□□□□ -1.04
RGPD3-201ENST00000304514 ZNF594Q96JF6 807 aaPredicted RBP8.58□□□□□ -1.04
RGPD3-201ENST00000304514 BCL9LQ86UU0 1499 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 CDHR2Q9BYE9 1310 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 EYA2O00167 538 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 AP5Z1O43299 807 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 ZKSCAN5Q9Y2L8 839 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 TCEANC2Q96MN5 208 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 PUS3Q9BZE2 481 aaKnown RBP8.58□□□□□ -1.04
RGPD3-201ENST00000304514 HSPA2P54652 639 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 VSIG10Q8N0Z9 540 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 FAM184AQ8NB25 1140 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 SLAIN2Q9P270 581 aa8.58□□□□□ -1.04
RGPD3-201ENST00000304514 TTC6Q86TZ1 520 aa8.57□□□□□ -1.04
RGPD3-201ENST00000304514 RNF113AO15541 343 aaKnown RBP8.57□□□□□ -1.04
RGPD3-201ENST00000304514 FIBPO43427 364 aa8.57□□□□□ -1.04
RGPD3-201ENST00000304514 ZNF335Q9H4Z2 1342 aaPredicted RBP8.57□□□□□ -1.04
RGPD3-201ENST00000304514 MYH13Q9UKX3 1938 aa8.57□□□□□ -1.04
RGPD3-201ENST00000304514 ADD1P35611 737 aaKnown RBP8.57□□□□□ -1.04
RGPD3-201ENST00000304514 LARP1BQ659C4 914 aaKnown RBP8.57□□□□□ -1.04
RGPD3-201ENST00000304514 JAK2O60674 1132 aa8.57□□□□□ -1.04
RGPD3-201ENST00000304514 GOLIM4O00461 696 aa8.56□□□□□ -1.04
RGPD3-201ENST00000304514 HSPD1P10809 573 aaKnown RBP8.56□□□□□ -1.04
RGPD3-201ENST00000304514 TCIRG1Q13488 830 aa8.56□□□□□ -1.04
RGPD3-201ENST00000304514 LLPHQ9BRT6 129 aaKnown RBP8.56□□□□□ -1.04
RGPD3-201ENST00000304514 ZBTB3Q9H5J0 574 aa8.56□□□□□ -1.04
RGPD3-201ENST00000304514 A0A1B0GUL7 405 aa8.56□□□□□ -1.04
RGPD3-201ENST00000304514 RNF214Q8ND24 703 aa8.56□□□□□ -1.04
RGPD3-201ENST00000304514 PCCAP05165 728 aaPredicted RBP8.56□□□□□ -1.04
RGPD3-201ENST00000304514 KCNJ4P48050 445 aa8.56□□□□□ -1.04
RGPD3-201ENST00000304514 TRIM28Q13263 835 aaKnown RBP8.56□□□□□ -1.04
RGPD3-201ENST00000304514 ILDR1Q86SU0 546 aaPredicted RBP8.56□□□□□ -1.04
RGPD3-201ENST00000304514 VGLL2Q8N8G2 317 aa8.56□□□□□ -1.04
RGPD3-201ENST00000304514 PIGBQ92521 554 aa8.56□□□□□ -1.04
RGPD3-201ENST00000304514 PRDM11Q9NQV5 511 aa8.56□□□□□ -1.04
RGPD3-201ENST00000304514 FBXO3Q9UK99 471 aa8.56□□□□□ -1.04
RGPD3-201ENST00000304514 MRVI1Q9Y6F6 885 aa8.56□□□□□ -1.04
RGPD3-201ENST00000304514 E7EWF7 191 aa8.56□□□□□ -1.04
RGPD3-201ENST00000304514 NSUN7Q8NE18 718 aaKnown RBP8.56□□□□□ -1.04
RGPD3-201ENST00000304514 HMGB1P09429 215 aaKnown RBP8.55□□□□□ -1.04
RGPD3-201ENST00000304514 EVCP57679 992 aa8.55□□□□□ -1.04
RGPD3-201ENST00000304514 STK3Q13188 491 aa8.55□□□□□ -1.04
RGPD3-201ENST00000304514 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms