RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 TFIP11Q9UBB9 837 aaKnown RBP9.36□□□□□ -0.91
NKRF-201ENST00000304449 PARP4Q9UKK3 1724 aaKnown RBP9.35□□□□□ -0.91
NKRF-201ENST00000304449 GCP02774 474 aa9.35□□□□□ -0.91
NKRF-201ENST00000304449 CALCOCO1Q9P1Z2 691 aa9.35□□□□□ -0.91
NKRF-201ENST00000304449 NEURL1BA8MQ27 555 aa9.35□□□□□ -0.91
NKRF-201ENST00000304449 HIP1O00291 1037 aa9.35□□□□□ -0.91
NKRF-201ENST00000304449 HNRNPH2P55795 449 aaKnown RBP9.35□□□□□ -0.91
NKRF-201ENST00000304449 TEFQ10587 303 aa9.35□□□□□ -0.91
NKRF-201ENST00000304449 NEK11Q8NG66 645 aa9.35□□□□□ -0.91
NKRF-201ENST00000304449 NOL10Q9BSC4 688 aaKnown RBP9.35□□□□□ -0.91
NKRF-201ENST00000304449 CLIP2Q9UDT6 1046 aa9.35□□□□□ -0.91
NKRF-201ENST00000304449 ZNF609O15014 1411 aa9.35□□□□□ -0.91
NKRF-201ENST00000304449 KIF1AQ12756 1690 aa9.34□□□□□ -0.91
NKRF-201ENST00000304449 A0A087WWV3 80 aa9.34□□□□□ -0.91
NKRF-201ENST00000304449 IFIT2P09913 472 aaKnown RBP9.34□□□□□ -0.91
NKRF-201ENST00000304449 CASP7P55210 303 aa9.34□□□□□ -0.91
NKRF-201ENST00000304449 RABL6Q3YEC7 729 aaPredicted RBP9.34□□□□□ -0.91
NKRF-201ENST00000304449 CACTINQ8WUQ7 758 aaKnown RBP9.34□□□□□ -0.91
NKRF-201ENST00000304449 TPM3P06753 285 aa9.34□□□□□ -0.91
NKRF-201ENST00000304449 ADD1P35611 737 aaKnown RBP9.34□□□□□ -0.91
NKRF-201ENST00000304449 TAF7LQ5H9L4 462 aa9.34□□□□□ -0.91
NKRF-201ENST00000304449 ZSCAN25Q6NSZ9 544 aa9.34□□□□□ -0.91
NKRF-201ENST00000304449 C9orf78Q9NZ63 289 aaPredicted RBP9.34□□□□□ -0.91
NKRF-201ENST00000304449 MORC2Q9Y6X9 1032 aaPredicted RBP9.34□□□□□ -0.91
NKRF-201ENST00000304449 PLEKHG2Q9H7P9 1386 aa9.34□□□□□ -0.91
NKRF-201ENST00000304449 UBR2Q8IWV8 1755 aa9.34□□□□□ -0.91
NKRF-201ENST00000304449 TYRO3Q06418 890 aa9.34□□□□□ -0.91
NKRF-201ENST00000304449 PTPN14Q15678 1187 aa9.34□□□□□ -0.91
NKRF-201ENST00000304449 PGBD1Q96JS3 809 aa9.34□□□□□ -0.91
NKRF-201ENST00000304449 CCDC8Q9H0W5 538 aaPredicted RBP9.34□□□□□ -0.91
NKRF-201ENST00000304449 NUP62CLQ9H1M0 184 aa9.34□□□□□ -0.91
NKRF-201ENST00000304449 DNAJC25Q9H1X3 360 aa9.34□□□□□ -0.91
NKRF-201ENST00000304449 TNMDQ9H2S6 317 aa9.34□□□□□ -0.91
NKRF-201ENST00000304449 COPRSQ9NQ92 184 aa9.34□□□□□ -0.91
NKRF-201ENST00000304449 CEBPZQ03701 1054 aaKnown RBP9.33□□□□□ -0.92
NKRF-201ENST00000304449 GCKRQ14397 625 aa9.33□□□□□ -0.92
NKRF-201ENST00000304449 MAP3K11Q16584 847 aa9.33□□□□□ -0.92
NKRF-201ENST00000304449 PLA2G4DQ86XP0 818 aa9.33□□□□□ -0.92
NKRF-201ENST00000304449 ZNF397Q8NF99 534 aaPredicted RBP9.33□□□□□ -0.92
NKRF-201ENST00000304449 FAM200AQ8TCP9 573 aa9.33□□□□□ -0.92
NKRF-201ENST00000304449 GPATCH3Q96I76 525 aa9.33□□□□□ -0.92
NKRF-201ENST00000304449 NWD2Q9ULI1 1742 aa9.33□□□□□ -0.92
NKRF-201ENST00000304449 ATP5JP18859 108 aa9.33□□□□□ -0.92
NKRF-201ENST00000304449 PTPN12Q05209 780 aaKnown RBP9.33□□□□□ -0.92
NKRF-201ENST00000304449 RESTQ13127 1097 aa9.33□□□□□ -0.92
NKRF-201ENST00000304449 ERCC6LQ2NKX8 1250 aa9.33□□□□□ -0.92
NKRF-201ENST00000304449 LARP1BQ659C4 914 aaKnown RBP9.33□□□□□ -0.92
NKRF-201ENST00000304449 LARP1Q6PKG0 1096 aaKnown RBP9.33□□□□□ -0.92
NKRF-201ENST00000304449 KLHDC4Q8TBB5 520 aa9.33□□□□□ -0.92
NKRF-201ENST00000304449 ANKRD24Q8TF21 1146 aa9.33□□□□□ -0.92
NKRF-201ENST00000304449 DACT1Q9NYF0 836 aa9.33□□□□□ -0.92
NKRF-201ENST00000304449 HMG20BQ9P0W2 317 aa9.33□□□□□ -0.92
NKRF-201ENST00000304449 DBNLQ9UJU6 430 aaKnown RBP9.33□□□□□ -0.92
NKRF-201ENST00000304449 ZKSCAN1P17029 563 aaPredicted RBP9.32□□□□□ -0.92
NKRF-201ENST00000304449 PSMA5P28066 241 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 RBM6P78332 1123 aaKnown RBP9.32□□□□□ -0.92
NKRF-201ENST00000304449 IRX3P78415 501 aaPredicted RBP9.32□□□□□ -0.92
NKRF-201ENST00000304449 CCDC144BQ3MJ40 725 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 PPP4R3CPQ6ZMV5 832 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 CCDC144CPQ8IYA2 1237 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 SMARCC2Q8TAQ2 1214 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 LEO1Q8WVC0 666 aaPredicted RBP9.32□□□□□ -0.92
NKRF-201ENST00000304449 AGXT2Q9BYV1 514 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 CBX8Q9HC52 389 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 HDAC5Q9UQL6 1122 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 PAPPAQ13219 1627 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 ERBB3P21860 1342 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 CHGBP05060 677 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 C10orf67Q8IYJ2 551 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 METTL22Q9BUU2 404 aaPredicted RBP9.32□□□□□ -0.92
NKRF-201ENST00000304449 PAXBP1Q9Y5B6 917 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 USP16Q9Y5T5 823 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 MEGF6O75095 1541 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 SALL1Q9NSC2 1324 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 ZNF165P49910 485 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 FOSBP53539 338 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 KRT85P78386 507 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 OS9Q13438 667 aaPredicted RBP9.32□□□□□ -0.92
NKRF-201ENST00000304449 ANKRD1Q15327 319 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 ZNF790Q6PG37 636 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 BICD2Q8TD16 824 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 EDC3Q96F86 508 aaKnown RBP9.32□□□□□ -0.92
NKRF-201ENST00000304449 TCEANC2Q96MN5 208 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 BOLA2Q9H3K6 86 aa9.32□□□□□ -0.92
NKRF-201ENST00000304449 SPEF2Q9C093 1822 aa9.31□□□□□ -0.92
NKRF-201ENST00000304449 SKILP12757 684 aa9.31□□□□□ -0.92
NKRF-201ENST00000304449 TDRD7Q8NHU6 1098 aaKnown RBP9.31□□□□□ -0.92
NKRF-201ENST00000304449 CLSTN2Q9H4D0 955 aa9.31□□□□□ -0.92
NKRF-201ENST00000304449 SLC52A2Q9HAB3 445 aa9.31□□□□□ -0.92
NKRF-201ENST00000304449 GOLGA6L19H0YKK7 550 aa9.31□□□□□ -0.92
NKRF-201ENST00000304449 BLOC1S2Q6QNY1 142 aa9.31□□□□□ -0.92
NKRF-201ENST00000304449 RBM33Q96EV2 1170 aaKnown RBP9.31□□□□□ -0.92
NKRF-201ENST00000304449 ORAI2Q96SN7 254 aa9.31□□□□□ -0.92
NKRF-201ENST00000304449 NPHP3Q7Z494 1330 aa9.31□□□□□ -0.92
NKRF-201ENST00000304449 NR1I2O75469 434 aa9.3□□□□□ -0.92
NKRF-201ENST00000304449 CTDNEP1O95476 244 aa9.3□□□□□ -0.92
NKRF-201ENST00000304449 PSME1Q06323 249 aa9.3□□□□□ -0.92
NKRF-201ENST00000304449 G3BP1Q13283 466 aaKnown RBP eCLIP9.3□□□□□ -0.92
NKRF-201ENST00000304449 TNNI3KQ59H18 835 aa9.3□□□□□ -0.92
NKRF-201ENST00000304449 ESCO1Q5FWF5 840 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms