RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 XDHP47989 1333 aa21.29■■□□□ 1
TRAPPC1-201ENST00000303731 ECE2O60344 883 aa21.29■■□□□ 1
TRAPPC1-201ENST00000303731 VAMP4O75379 141 aa21.29■■□□□ 1
TRAPPC1-201ENST00000303731 UFL1O94874 794 aa21.29■■□□□ 1
TRAPPC1-201ENST00000303731 CWF19L2Q2TBE0 894 aaKnown RBP21.29■■□□□ 1
TRAPPC1-201ENST00000303731 G2E3Q7L622 706 aa21.29■■□□□ 1
TRAPPC1-201ENST00000303731 CNOT7Q9UIV1 285 aaKnown RBP21.29■■□□□ 1
TRAPPC1-201ENST00000303731 SALL2Q9Y467 1007 aaPredicted RBP21.29■■□□□ 1
TRAPPC1-201ENST00000303731 G3V3G9 751 aa21.28■■□□□ 1
TRAPPC1-201ENST00000303731 H7C1W4 665 aa21.28■■□□□ 1
TRAPPC1-201ENST00000303731 PSMD14O00487 310 aa21.28■■□□□ 1
TRAPPC1-201ENST00000303731 DEFB115Q30KQ5 88 aa21.28■■□□□ 1
TRAPPC1-201ENST00000303731 DCAF8Q5TAQ9 597 aa21.28■■□□□ 1
TRAPPC1-201ENST00000303731 FAM9BQ8IZU0 186 aa21.28■■□□□ 1
TRAPPC1-201ENST00000303731 TTLL11Q8NHH1 800 aa21.28■■□□□ 1
TRAPPC1-201ENST00000303731 DNAAF4Q8WXU2 420 aa21.28■■□□□ 1
TRAPPC1-201ENST00000303731 JARID2Q92833 1246 aaPredicted RBP21.28■■□□□ 1
TRAPPC1-201ENST00000303731 ABT1Q9ULW3 272 aaKnown RBP21.28■■□□□ 1
TRAPPC1-201ENST00000303731 ATP2B4P23634 1241 aa21.27■■□□□ 1
TRAPPC1-201ENST00000303731 VEGFBP49765 207 aa21.27■■□□□ 1
TRAPPC1-201ENST00000303731 EXOSC9Q06265 439 aaKnown RBP21.27■■□□□ 1
TRAPPC1-201ENST00000303731 GCKRQ14397 625 aa21.27■■□□□ 1
TRAPPC1-201ENST00000303731 MICALL2Q8IY33 904 aa21.27■■□□□ 1
TRAPPC1-201ENST00000303731 LINS1Q8NG48 757 aa21.27■■□□□ 1
TRAPPC1-201ENST00000303731 CCDC85AQ96PX6 553 aaPredicted RBP21.27■■□□□ 1
TRAPPC1-201ENST00000303731 PLA2G12BQ9BX93 195 aa21.27■■□□□ 1
TRAPPC1-201ENST00000303731 BSDC1Q9NW68 430 aaPredicted RBP21.27■■□□□ 1
TRAPPC1-201ENST00000303731 UBE3BQ7Z3V4 1068 aa21.26■□□□□ 0.99
TRAPPC1-201ENST00000303731 ZNF609O15014 1411 aa21.25■□□□□ 0.99
TRAPPC1-201ENST00000303731 DOK7Q18PE1 504 aa21.25■□□□□ 0.99
TRAPPC1-201ENST00000303731 PSME4Q14997 1843 aa21.25■□□□□ 0.99
TRAPPC1-201ENST00000303731 CDC37L1Q7L3B6 337 aa21.24■□□□□ 0.99
TRAPPC1-201ENST00000303731 GREM2Q9H772 168 aa21.24■□□□□ 0.99
TRAPPC1-201ENST00000303731 ZBTB12Q9Y330 459 aaPredicted RBP21.24■□□□□ 0.99
TRAPPC1-201ENST00000303731 SCN9AQ15858 1988 aa21.23■□□□□ 0.99
TRAPPC1-201ENST00000303731 VIL1P09327 827 aaKnown RBP21.23■□□□□ 0.99
TRAPPC1-201ENST00000303731 IGHMBP2P38935 993 aaKnown RBP21.23■□□□□ 0.99
TRAPPC1-201ENST00000303731 ECE1P42892 770 aa21.23■□□□□ 0.99
TRAPPC1-201ENST00000303731 COL13A1Q5TAT6 717 aaPredicted RBP21.23■□□□□ 0.99
TRAPPC1-201ENST00000303731 TRPM4Q8TD43 1214 aa21.23■□□□□ 0.99
TRAPPC1-201ENST00000303731 AIDAQ96BJ3 306 aa21.23■□□□□ 0.99
TRAPPC1-201ENST00000303731 SPEF2Q9C093 1822 aa21.22■□□□□ 0.99
TRAPPC1-201ENST00000303731 TRAF5O00463 557 aa21.22■□□□□ 0.99
TRAPPC1-201ENST00000303731 HIRAP54198 1017 aaPredicted RBP21.22■□□□□ 0.99
TRAPPC1-201ENST00000303731 PODNQ7Z5L7 613 aa21.22■□□□□ 0.99
TRAPPC1-201ENST00000303731 GPR101Q96P66 508 aaPredicted RBP21.22■□□□□ 0.99
TRAPPC1-201ENST00000303731 TLL2Q9Y6L7 1015 aa21.22■□□□□ 0.99
TRAPPC1-201ENST00000303731 WDR33Q9C0J8 1336 aaKnown RBP21.22■□□□□ 0.99
TRAPPC1-201ENST00000303731 MED23Q9ULK4 1368 aa21.22■□□□□ 0.99
TRAPPC1-201ENST00000303731 CASP7P55210 303 aa21.21■□□□□ 0.99
TRAPPC1-201ENST00000303731 CST9Q5W186 159 aa21.21■□□□□ 0.99
TRAPPC1-201ENST00000303731 AGBL3Q8NEM8 1001 aa21.21■□□□□ 0.99
TRAPPC1-201ENST00000303731 GLIS2Q9BZE0 524 aaPredicted RBP21.21■□□□□ 0.99
TRAPPC1-201ENST00000303731 MINPP1Q9UNW1 487 aa21.21■□□□□ 0.99
TRAPPC1-201ENST00000303731 THSD7BQ9C0I4 1608 aa21.2■□□□□ 0.98
TRAPPC1-201ENST00000303731 CSF1RP07333 972 aa21.2■□□□□ 0.98
TRAPPC1-201ENST00000303731 MAP2K1Q02750 393 aaPredicted RBP21.2■□□□□ 0.98
TRAPPC1-201ENST00000303731 HHIPL1Q96JK4 782 aa21.2■□□□□ 0.98
TRAPPC1-201ENST00000303731 SPINK5Q9NQ38 1064 aaPredicted RBP21.2■□□□□ 0.98
TRAPPC1-201ENST00000303731 CELF2O95319 508 aaKnown RBP21.19■□□□□ 0.98
TRAPPC1-201ENST00000303731 ITGA6P23229 1130 aa21.19■□□□□ 0.98
TRAPPC1-201ENST00000303731 RSBN1LQ6PCB5 846 aaPredicted RBP21.19■□□□□ 0.98
TRAPPC1-201ENST00000303731 SAMD7Q7Z3H4 446 aa21.19■□□□□ 0.98
TRAPPC1-201ENST00000303731 MPHOSPH8Q99549 860 aa21.19■□□□□ 0.98
TRAPPC1-201ENST00000303731 ANKRD2Q9GZV1 360 aa21.19■□□□□ 0.98
TRAPPC1-201ENST00000303731 KCNQ5Q9NR82 932 aa21.19■□□□□ 0.98
TRAPPC1-201ENST00000303731 WBP1LQ9NX94 342 aa21.19■□□□□ 0.98
TRAPPC1-201ENST00000303731 LEMD3Q9Y2U8 911 aa21.19■□□□□ 0.98
TRAPPC1-201ENST00000303731 SHTN1A0MZ66 631 aa21.18■□□□□ 0.98
TRAPPC1-201ENST00000303731 CTCFP49711 727 aaPredicted RBP21.18■□□□□ 0.98
TRAPPC1-201ENST00000303731 CCT4P50991 539 aaKnown RBP21.18■□□□□ 0.98
TRAPPC1-201ENST00000303731 FMR1Q06787 632 aaKnown RBP eCLIP21.18■□□□□ 0.98
TRAPPC1-201ENST00000303731 TBC1D10BQ4KMP7 808 aaPredicted RBP21.18■□□□□ 0.98
TRAPPC1-201ENST00000303731 TNS4Q8IZW8 715 aa21.18■□□□□ 0.98
TRAPPC1-201ENST00000303731 ZNF521Q96K83 1311 aa21.18■□□□□ 0.98
TRAPPC1-201ENST00000303731 USP17L3A6NCW0 530 aa21.17■□□□□ 0.98
TRAPPC1-201ENST00000303731 USP17L4A6NCW7 530 aa21.17■□□□□ 0.98
TRAPPC1-201ENST00000303731 KIF4BQ2VIQ3 1234 aa21.17■□□□□ 0.98
TRAPPC1-201ENST00000303731 BEND3Q5T5X7 828 aa21.17■□□□□ 0.98
TRAPPC1-201ENST00000303731 PAXIP1Q6ZW49 1069 aaPredicted RBP21.17■□□□□ 0.98
TRAPPC1-201ENST00000303731 USP17L1Q7RTZ2 530 aa21.17■□□□□ 0.98
TRAPPC1-201ENST00000303731 SAPCD2Q86UD0 394 aa21.17■□□□□ 0.98
TRAPPC1-201ENST00000303731 DCPSQ96C86 337 aaKnown RBP21.17■□□□□ 0.98
TRAPPC1-201ENST00000303731 CAPNS2Q96L46 248 aa21.17■□□□□ 0.98
TRAPPC1-201ENST00000303731 PRDM10Q9NQV6 1147 aa21.17■□□□□ 0.98
TRAPPC1-201ENST00000303731 ANKRD18BA2A2Z9 1011 aa21.16■□□□□ 0.98
TRAPPC1-201ENST00000303731 FOXN1O15353 648 aa21.16■□□□□ 0.98
TRAPPC1-201ENST00000303731 FAM161AQ3B820 660 aa21.16■□□□□ 0.98
TRAPPC1-201ENST00000303731 MMP14P50281 582 aa21.15■□□□□ 0.98
TRAPPC1-201ENST00000303731 ZNF280AP59817 542 aaPredicted RBP21.15■□□□□ 0.98
TRAPPC1-201ENST00000303731 KRT26Q7Z3Y9 468 aa21.15■□□□□ 0.98
TRAPPC1-201ENST00000303731 COA1Q9GZY4 146 aa21.15■□□□□ 0.98
TRAPPC1-201ENST00000303731 POLR2AP24928 1970 aaKnown RBP21.15■□□□□ 0.98
TRAPPC1-201ENST00000303731 MYO3BQ8WXR4 1341 aa21.14■□□□□ 0.97
TRAPPC1-201ENST00000303731 F6X3S4 739 aa21.14■□□□□ 0.97
TRAPPC1-201ENST00000303731 ALDH1L1O75891 902 aa21.14■□□□□ 0.97
TRAPPC1-201ENST00000303731 MAP2K2P36507 400 aa21.14■□□□□ 0.97
TRAPPC1-201ENST00000303731 RBM26Q5T8P6 1007 aaKnown RBP21.14■□□□□ 0.97
TRAPPC1-201ENST00000303731 USP48Q86UV5 1035 aa21.14■□□□□ 0.97
TRAPPC1-201ENST00000303731 ZNF408Q9H9D4 720 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms