RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 NOL8Q76FK4 1167 aaKnown RBP17.45■□□□□ 0.38
SHCBP1-201ENST00000303383 KBTBD3Q8NAB2 608 aa17.45■□□□□ 0.38
SHCBP1-201ENST00000303383 UPF3BQ9BZI7 483 aaKnown RBP17.45■□□□□ 0.38
SHCBP1-201ENST00000303383 SRP68Q9UHB9 627 aaKnown RBP17.45■□□□□ 0.38
SHCBP1-201ENST00000303383 ADORA1P30542 326 aa17.45■□□□□ 0.38
SHCBP1-201ENST00000303383 PRPF40BQ6NWY9 871 aaKnown RBP17.45■□□□□ 0.38
SHCBP1-201ENST00000303383 NYXQ9GZU5 481 aa17.45■□□□□ 0.38
SHCBP1-201ENST00000303383 CICQ96RK0 1608 aaPredicted RBP17.45■□□□□ 0.38
SHCBP1-201ENST00000303383 TRAPPC3LQ5T215 181 aa17.45■□□□□ 0.38
SHCBP1-201ENST00000303383 NBPF5PQ86XG9 351 aaPredicted RBP17.45■□□□□ 0.38
SHCBP1-201ENST00000303383 ANTXR1Q9H6X2 564 aa17.45■□□□□ 0.38
SHCBP1-201ENST00000303383 SNRKQ9NRH2 765 aa17.45■□□□□ 0.38
SHCBP1-201ENST00000303383 COL5A3P25940 1745 aaPredicted RBP17.44■□□□□ 0.38
SHCBP1-201ENST00000303383 RNF20Q5VTR2 975 aa17.44■□□□□ 0.38
SHCBP1-201ENST00000303383 HELBQ8NG08 1087 aaPredicted RBP17.44■□□□□ 0.38
SHCBP1-201ENST00000303383 CDC5LQ99459 802 aaKnown RBP17.44■□□□□ 0.38
SHCBP1-201ENST00000303383 MROH5Q6ZUA9 1318 aa17.44■□□□□ 0.38
SHCBP1-201ENST00000303383 PTH1RQ03431 593 aa17.44■□□□□ 0.38
SHCBP1-201ENST00000303383 SEC31BQ9NQW1 1179 aa17.44■□□□□ 0.38
SHCBP1-201ENST00000303383 RREB1Q92766 1687 aa17.44■□□□□ 0.38
SHCBP1-201ENST00000303383 PDE8BO95263 885 aa17.44■□□□□ 0.38
SHCBP1-201ENST00000303383 ERFEQ4G0M1 354 aa17.44■□□□□ 0.38
SHCBP1-201ENST00000303383 TBC1D9BQ66K14 1250 aa17.44■□□□□ 0.38
SHCBP1-201ENST00000303383 ZNF772Q68DY9 489 aaPredicted RBP17.43■□□□□ 0.38
SHCBP1-201ENST00000303383 TRIM37O94972 964 aa17.43■□□□□ 0.38
SHCBP1-201ENST00000303383 RBM8AQ9Y5S9 174 aaKnown RBP17.43■□□□□ 0.38
SHCBP1-201ENST00000303383 ZNF831Q5JPB2 1677 aa17.42■□□□□ 0.38
SHCBP1-201ENST00000303383 ARHGEF1Q92888 912 aaKnown RBP17.42■□□□□ 0.38
SHCBP1-201ENST00000303383 SNX14Q9Y5W7 946 aa17.42■□□□□ 0.38
SHCBP1-201ENST00000303383 SLC5A1P13866 664 aa17.42■□□□□ 0.38
SHCBP1-201ENST00000303383 PUM3Q15397 648 aaKnown RBP17.42■□□□□ 0.38
SHCBP1-201ENST00000303383 MCMDC2Q4G0Z9 681 aa17.42■□□□□ 0.38
SHCBP1-201ENST00000303383 TPTE2Q6XPS3 522 aa17.42■□□□□ 0.38
SHCBP1-201ENST00000303383 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.42■□□□□ 0.38
SHCBP1-201ENST00000303383 RFX7Q2KHR2 1363 aa17.42■□□□□ 0.38
SHCBP1-201ENST00000303383 RGL2O15211 777 aa17.41■□□□□ 0.38
SHCBP1-201ENST00000303383 FRAT2O75474 233 aaPredicted RBP17.41■□□□□ 0.38
SHCBP1-201ENST00000303383 CIZ1Q9ULV3 898 aaPredicted RBP17.41■□□□□ 0.38
SHCBP1-201ENST00000303383 ANKRD18AQ8IVF6 992 aa17.41■□□□□ 0.38
SHCBP1-201ENST00000303383 LPIN2Q92539 896 aa17.41■□□□□ 0.38
SHCBP1-201ENST00000303383 CASTP20810 708 aaKnown RBP17.4■□□□□ 0.38
SHCBP1-201ENST00000303383 RIC1Q4ADV7 1423 aa17.4■□□□□ 0.38
SHCBP1-201ENST00000303383 JAKMIP1Q96N16 626 aaKnown RBP17.4■□□□□ 0.38
SHCBP1-201ENST00000303383 NLRP3Q96P20 1036 aa17.4■□□□□ 0.38
SHCBP1-201ENST00000303383 RBM6P78332 1123 aaKnown RBP17.4■□□□□ 0.38
SHCBP1-201ENST00000303383 WASHC4Q2M389 1173 aa17.4■□□□□ 0.38
SHCBP1-201ENST00000303383 IL27Q8NEV9 243 aa17.4■□□□□ 0.38
SHCBP1-201ENST00000303383 ZNF589Q86UQ0 364 aaPredicted RBP17.4■□□□□ 0.38
SHCBP1-201ENST00000303383 MAP4K1Q92918 833 aa17.4■□□□□ 0.38
SHCBP1-201ENST00000303383 TAF5LO75529 589 aa17.39■□□□□ 0.37
SHCBP1-201ENST00000303383 RASEFQ8IZ41 740 aa17.39■□□□□ 0.37
SHCBP1-201ENST00000303383 CREB3L3Q68CJ9 461 aa17.39■□□□□ 0.37
SHCBP1-201ENST00000303383 RNF113AO15541 343 aaKnown RBP17.38■□□□□ 0.37
SHCBP1-201ENST00000303383 UQCRFS1P1P0C7P4 283 aa17.38■□□□□ 0.37
SHCBP1-201ENST00000303383 CCDC129Q6ZRS4 1044 aa17.38■□□□□ 0.37
SHCBP1-201ENST00000303383 SEC62Q99442 399 aaKnown RBP17.38■□□□□ 0.37
SHCBP1-201ENST00000303383 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.38■□□□□ 0.37
SHCBP1-201ENST00000303383 BCL2L12Q9HB09 334 aa17.38■□□□□ 0.37
SHCBP1-201ENST00000303383 PSMA5P28066 241 aa17.38■□□□□ 0.37
SHCBP1-201ENST00000303383 ZAP70P43403 619 aa17.38■□□□□ 0.37
SHCBP1-201ENST00000303383 RTN4Q9NQC3 1192 aaKnown RBP17.38■□□□□ 0.37
SHCBP1-201ENST00000303383 HELLSQ9NRZ9 838 aa17.38■□□□□ 0.37
SHCBP1-201ENST00000303383 CYP46A1Q9Y6A2 500 aa17.38■□□□□ 0.37
SHCBP1-201ENST00000303383 HMGB2P26583 209 aaKnown RBP17.38■□□□□ 0.37
SHCBP1-201ENST00000303383 TMX3Q96JJ7 454 aa17.38■□□□□ 0.37
SHCBP1-201ENST00000303383 MED23Q9ULK4 1368 aa17.38■□□□□ 0.37
SHCBP1-201ENST00000303383 SLC27A3Q5K4L6 730 aa17.37■□□□□ 0.37
SHCBP1-201ENST00000303383 ZFYP08048 801 aaPredicted RBP17.37■□□□□ 0.37
SHCBP1-201ENST00000303383 TICAM2Q86XR7 235 aa17.37■□□□□ 0.37
SHCBP1-201ENST00000303383 VGLL2Q8N8G2 317 aa17.37■□□□□ 0.37
SHCBP1-201ENST00000303383 SBF2Q86WG5 1849 aa17.37■□□□□ 0.37
SHCBP1-201ENST00000303383 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.37■□□□□ 0.37
SHCBP1-201ENST00000303383 SSFA2P28290 1259 aa17.37■□□□□ 0.37
SHCBP1-201ENST00000303383 NECTIN1Q15223 517 aa17.37■□□□□ 0.37
SHCBP1-201ENST00000303383 TTF1Q15361 905 aaPredicted RBP17.37■□□□□ 0.37
SHCBP1-201ENST00000303383 CCDC102BQ68D86 513 aa17.37■□□□□ 0.37
SHCBP1-201ENST00000303383 CCDC24Q8N4L8 307 aa17.37■□□□□ 0.37
SHCBP1-201ENST00000303383 LRRC4BQ9NT99 713 aa17.37■□□□□ 0.37
SHCBP1-201ENST00000303383 U3KPZ7 1027 aaPredicted RBP17.37■□□□□ 0.37
SHCBP1-201ENST00000303383 BCORQ6W2J9 1755 aa17.37■□□□□ 0.37
SHCBP1-201ENST00000303383 ABCC12Q96J65 1359 aa17.37■□□□□ 0.37
SHCBP1-201ENST00000303383 ZSCAN25Q6NSZ9 544 aa17.36■□□□□ 0.37
SHCBP1-201ENST00000303383 CWC22Q9HCG8 908 aaKnown RBP17.36■□□□□ 0.37
SHCBP1-201ENST00000303383 HMG20BQ9P0W2 317 aa17.36■□□□□ 0.37
SHCBP1-201ENST00000303383 RTL9Q8NET4 1388 aa17.36■□□□□ 0.37
SHCBP1-201ENST00000303383 SLC27A2O14975 620 aa17.36■□□□□ 0.37
SHCBP1-201ENST00000303383 CHGBP05060 677 aa17.36■□□□□ 0.37
SHCBP1-201ENST00000303383 ADRA2BP18089 450 aa17.36■□□□□ 0.37
SHCBP1-201ENST00000303383 SCARF1Q14162 830 aa17.36■□□□□ 0.37
SHCBP1-201ENST00000303383 SF3B3Q15393 1217 aaKnown RBP17.36■□□□□ 0.37
SHCBP1-201ENST00000303383 PHKA1P46020 1223 aa17.35■□□□□ 0.37
SHCBP1-201ENST00000303383 CHRNDQ07001 517 aa17.35■□□□□ 0.37
SHCBP1-201ENST00000303383 PI16Q6UXB8 463 aa17.35■□□□□ 0.37
SHCBP1-201ENST00000303383 PDRG1Q9NUG6 133 aa17.35■□□□□ 0.37
SHCBP1-201ENST00000303383 IDH1O75874 414 aaKnown RBP17.35■□□□□ 0.37
SHCBP1-201ENST00000303383 MCAMP43121 646 aa17.35■□□□□ 0.37
SHCBP1-201ENST00000303383 ZMYM1Q5SVZ6 1142 aa17.35■□□□□ 0.37
SHCBP1-201ENST00000303383 IL17RAQ96F46 866 aa17.34■□□□□ 0.37
SHCBP1-201ENST00000303383 KRT32Q14532 448 aa17.34■□□□□ 0.37
SHCBP1-201ENST00000303383 BLOC1S2Q6QNY1 142 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms