RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 RTL1A6NKG5 1358 aa22.2■■□□□ 1.14
TSR1-201ENST00000301364 EXOC5O00471 708 aa22.2■■□□□ 1.14
TSR1-201ENST00000301364 PRC1O43663 620 aa22.2■■□□□ 1.14
TSR1-201ENST00000301364 ZNF76P36508 570 aa22.2■■□□□ 1.14
TSR1-201ENST00000301364 UBA7P41226 1012 aa22.2■■□□□ 1.14
TSR1-201ENST00000301364 PDE4BQ07343 736 aa22.2■■□□□ 1.14
TSR1-201ENST00000301364 CTAGE1Q96RT6 745 aa22.2■■□□□ 1.14
TSR1-201ENST00000301364 PRM3Q9NNZ6 103 aa22.2■■□□□ 1.14
TSR1-201ENST00000301364 KDM6BO15054 1643 aa22.2■■□□□ 1.14
TSR1-201ENST00000301364 NCKAP5LQ9HCH0 1330 aa22.2■■□□□ 1.14
TSR1-201ENST00000301364 KRT222Q8N1A0 295 aa22.19■■□□□ 1.14
TSR1-201ENST00000301364 PRKCSHP14314 528 aaPredicted RBP22.19■■□□□ 1.14
TSR1-201ENST00000301364 BRAPQ7Z569 592 aa22.19■■□□□ 1.14
TSR1-201ENST00000301364 ZSCAN29Q8IWY8 852 aaPredicted RBP22.19■■□□□ 1.14
TSR1-201ENST00000301364 ZPR1O75312 459 aa22.19■■□□□ 1.14
TSR1-201ENST00000301364 PTPDC1A2A3K4 754 aa22.19■■□□□ 1.14
TSR1-201ENST00000301364 ZCRB1Q8TBF4 217 aaKnown RBP22.19■■□□□ 1.14
TSR1-201ENST00000301364 SRRTQ9BXP5 876 aaKnown RBP22.19■■□□□ 1.14
TSR1-201ENST00000301364 SPAG1Q07617 926 aa22.18■■□□□ 1.14
TSR1-201ENST00000301364 VPS36Q86VN1 386 aa22.18■■□□□ 1.14
TSR1-201ENST00000301364 FAM114A1Q8IWE2 563 aa22.18■■□□□ 1.14
TSR1-201ENST00000301364 LRRC59Q96AG4 307 aaKnown RBP22.18■■□□□ 1.14
TSR1-201ENST00000301364 RMND1Q9NWS8 449 aa22.18■■□□□ 1.14
TSR1-201ENST00000301364 SNX14Q9Y5W7 946 aa22.18■■□□□ 1.14
TSR1-201ENST00000301364 LMBRD1Q9NUN5 540 aa22.18■■□□□ 1.14
TSR1-201ENST00000301364 SPDYE4A6NLX3 237 aa22.18■■□□□ 1.14
TSR1-201ENST00000301364 POLR3GO15318 223 aaPredicted RBP22.18■■□□□ 1.14
TSR1-201ENST00000301364 RNMTO43148 476 aaKnown RBP22.18■■□□□ 1.14
TSR1-201ENST00000301364 MTIF2P46199 727 aaKnown RBP22.18■■□□□ 1.14
TSR1-201ENST00000301364 CHRNA2Q15822 529 aa22.18■■□□□ 1.14
TSR1-201ENST00000301364 KDM5DQ9BY66 1539 aa22.18■■□□□ 1.14
TSR1-201ENST00000301364 N4BP3O15049 544 aa22.18■■□□□ 1.14
TSR1-201ENST00000301364 HMGB2P26583 209 aaKnown RBP22.18■■□□□ 1.14
TSR1-201ENST00000301364 UBE2Q2Q8WVN8 375 aa22.18■■□□□ 1.14
TSR1-201ENST00000301364 RBM5P52756 815 aaKnown RBP eCLIP22.17■■□□□ 1.142e-8■■■□□ 16.5
TSR1-201ENST00000301364 RTN1Q16799 776 aa22.17■■□□□ 1.14
TSR1-201ENST00000301364 BICC1Q9H694 974 aaKnown RBP22.17■■□□□ 1.14
TSR1-201ENST00000301364 SLC9C2Q5TAH2 1124 aa22.17■■□□□ 1.14
TSR1-201ENST00000301364 ESR2Q92731 530 aa22.17■■□□□ 1.14
TSR1-201ENST00000301364 SEPT11Q9NVA2 429 aaKnown RBP22.17■■□□□ 1.14
TSR1-201ENST00000301364 TBX22Q9Y458 520 aa22.17■■□□□ 1.14
TSR1-201ENST00000301364 GOLGA6L7A0A1B0GV03 622 aa22.16■■□□□ 1.14
TSR1-201ENST00000301364 SLU7O95391 586 aaKnown RBP22.16■■□□□ 1.14
TSR1-201ENST00000301364 PTGS1P23219 599 aa22.16■■□□□ 1.14
TSR1-201ENST00000301364 TFCP2Q12800 502 aa22.16■■□□□ 1.14
TSR1-201ENST00000301364 TSPY2A6NKD2 308 aa22.16■■□□□ 1.14
TSR1-201ENST00000301364 LDHCP07864 332 aa22.16■■□□□ 1.14
TSR1-201ENST00000301364 NBPF7P0C2Y1 421 aaPredicted RBP22.16■■□□□ 1.14
TSR1-201ENST00000301364 RPS6KB1P23443 525 aa22.16■■□□□ 1.14
TSR1-201ENST00000301364 SLF2Q8IX21 1173 aa22.16■■□□□ 1.14
TSR1-201ENST00000301364 CALML4Q96GE6 196 aa22.16■■□□□ 1.14
TSR1-201ENST00000301364 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.16■■□□□ 1.143e-7■■□□□ 12.6
TSR1-201ENST00000301364 SHTN1A0MZ66 631 aa22.16■■□□□ 1.14
TSR1-201ENST00000301364 APOBRQ0VD83 1088 aa22.16■■□□□ 1.14
TSR1-201ENST00000301364 EHBP1Q8NDI1 1231 aa22.16■■□□□ 1.14
TSR1-201ENST00000301364 DNAI1Q9UI46 699 aa22.16■■□□□ 1.14
TSR1-201ENST00000301364 NFATC2IPQ8NCF5 419 aa22.16■■□□□ 1.14
TSR1-201ENST00000301364 ANKIB1Q9P2G1 1089 aa22.16■■□□□ 1.14
TSR1-201ENST00000301364 KAT14Q9H8E8 782 aa22.15■■□□□ 1.14
TSR1-201ENST00000301364 HELLSQ9NRZ9 838 aa22.15■■□□□ 1.14
TSR1-201ENST00000301364 MARCKSP29966 332 aaPredicted RBP22.15■■□□□ 1.14
TSR1-201ENST00000301364 CPA1P15085 419 aa22.14■■□□□ 1.14
TSR1-201ENST00000301364 CCDC152Q4G0S7 254 aa22.14■■□□□ 1.14
TSR1-201ENST00000301364 ALS2CR12Q96Q35 445 aa22.14■■□□□ 1.14
TSR1-201ENST00000301364 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.14■■□□□ 1.14
TSR1-201ENST00000301364 DCAF5Q96JK2 942 aa22.14■■□□□ 1.14
TSR1-201ENST00000301364 GCP02774 474 aa22.14■■□□□ 1.13
TSR1-201ENST00000301364 LUZP1Q86V48 1076 aa22.14■■□□□ 1.13
TSR1-201ENST00000301364 PNMA6EA0A0J9YXQ4 647 aa22.14■■□□□ 1.13
TSR1-201ENST00000301364 HSPA4P34932 840 aa22.14■■□□□ 1.13
TSR1-201ENST00000301364 TMX1Q9H3N1 280 aa22.14■■□□□ 1.13
TSR1-201ENST00000301364 SYNMO15061 1565 aa22.14■■□□□ 1.13
TSR1-201ENST00000301364 SPTY2D1Q68D10 685 aaPredicted RBP22.13■■□□□ 1.13
TSR1-201ENST00000301364 TDRD12Q587J7 1177 aaKnown RBP22.13■■□□□ 1.13
TSR1-201ENST00000301364 LLPHQ9BRT6 129 aaKnown RBP22.13■■□□□ 1.13
TSR1-201ENST00000301364 SLC27A2O14975 620 aa22.13■■□□□ 1.13
TSR1-201ENST00000301364 BRD1O95696 1058 aa22.13■■□□□ 1.13
TSR1-201ENST00000301364 BAG3O95817 575 aa22.13■■□□□ 1.13
TSR1-201ENST00000301364 LMOD1P29536 600 aaPredicted RBP22.13■■□□□ 1.13
TSR1-201ENST00000301364 TERF1P54274 439 aa22.13■■□□□ 1.13
TSR1-201ENST00000301364 FAM160A1Q05DH4 1040 aa22.12■■□□□ 1.13
TSR1-201ENST00000301364 CRNKL1Q9BZJ0 848 aaKnown RBP22.12■■□□□ 1.13
TSR1-201ENST00000301364 USP19O94966 1318 aa22.12■■□□□ 1.13
TSR1-201ENST00000301364 SLC4A4Q9Y6R1 1079 aa22.12■■□□□ 1.13
TSR1-201ENST00000301364 MPHOSPH10O00566 681 aaKnown RBP22.11■■□□□ 1.13
TSR1-201ENST00000301364 ARFGAP3Q9NP61 516 aa22.11■■□□□ 1.13
TSR1-201ENST00000301364 GSPT1P15170 499 aaKnown RBP22.11■■□□□ 1.13
TSR1-201ENST00000301364 NAA15Q9BXJ9 866 aaKnown RBP22.11■■□□□ 1.13
TSR1-201ENST00000301364 LRRC27Q9C0I9 530 aa22.11■■□□□ 1.13
TSR1-201ENST00000301364 ATP10AO60312 1499 aa22.11■■□□□ 1.13
TSR1-201ENST00000301364 GNAT2P19087 354 aa22.11■■□□□ 1.13
TSR1-201ENST00000301364 TMEM132AQ24JP5 1023 aa22.11■■□□□ 1.13
TSR1-201ENST00000301364 SSH2Q76I76 1423 aa22.11■■□□□ 1.13
TSR1-201ENST00000301364 TM6SF1Q9BZW5 370 aa22.1■■□□□ 1.13
TSR1-201ENST00000301364 TRIM75PA6NK02 468 aa22.1■■□□□ 1.13
TSR1-201ENST00000301364 CCDC178Q5BJE1 867 aa22.1■■□□□ 1.13
TSR1-201ENST00000301364 RRAGBQ5VZM2 374 aa22.1■■□□□ 1.13
TSR1-201ENST00000301364 SMARCC1Q92922 1105 aaPredicted RBP22.1■■□□□ 1.13
TSR1-201ENST00000301364 CYP7A1P22680 504 aa22.1■■□□□ 1.13
TSR1-201ENST00000301364 IFIT1BQ5T764 474 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms