RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 SF3B3Q15393 1217 aaKnown RBP19.04■□□□□ 0.64
HERPUD1-201ENST00000300302 ATP2B3Q16720 1220 aa19.04■□□□□ 0.64
HERPUD1-201ENST00000300302 CWC27Q6UX04 472 aaKnown RBP19.04■□□□□ 0.64
HERPUD1-201ENST00000300302 CDC5LQ99459 802 aaKnown RBP19.04■□□□□ 0.64
HERPUD1-201ENST00000300302 TNS1Q9HBL0 1735 aaKnown RBP19.03■□□□□ 0.64
HERPUD1-201ENST00000300302 PDE8BO95263 885 aa19.03■□□□□ 0.64
HERPUD1-201ENST00000300302 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.03■□□□□ 0.64
HERPUD1-201ENST00000300302 KIF2CQ99661 725 aa19.03■□□□□ 0.64
HERPUD1-201ENST00000300302 EN1Q05925 392 aaPredicted RBP19.03■□□□□ 0.64
HERPUD1-201ENST00000300302 KIAA1211Q6ZU35 1233 aa19.03■□□□□ 0.64
HERPUD1-201ENST00000300302 XAGE2Q96GT9 111 aa19.03■□□□□ 0.64
HERPUD1-201ENST00000300302 DNAJC2Q99543 621 aaKnown RBP19.03■□□□□ 0.64
HERPUD1-201ENST00000300302 SEC31BQ9NQW1 1179 aa19.03■□□□□ 0.64
HERPUD1-201ENST00000300302 RFX7Q2KHR2 1363 aa19.02■□□□□ 0.64
HERPUD1-201ENST00000300302 CARMIL3Q8ND23 1372 aa19.02■□□□□ 0.64
HERPUD1-201ENST00000300302 ABCC12Q96J65 1359 aa19.02■□□□□ 0.64
HERPUD1-201ENST00000300302 NPHP1O15259 732 aa19.02■□□□□ 0.64
HERPUD1-201ENST00000300302 SLC4A3P48751 1232 aa19.02■□□□□ 0.64
HERPUD1-201ENST00000300302 TICAM2Q86XR7 235 aa19.02■□□□□ 0.64
HERPUD1-201ENST00000300302 VGLL2Q8N8G2 317 aa19.02■□□□□ 0.64
HERPUD1-201ENST00000300302 NLRP3Q96P20 1036 aa19.02■□□□□ 0.64
HERPUD1-201ENST00000300302 IFIT1P09914 478 aaKnown RBP19.01■□□□□ 0.63
HERPUD1-201ENST00000300302 RABEP1Q15276 862 aa19.01■□□□□ 0.63
HERPUD1-201ENST00000300302 EZH2Q15910 746 aaKnown RBP19.01■□□□□ 0.63
HERPUD1-201ENST00000300302 ZNF827Q17R98 1081 aa19.01■□□□□ 0.63
HERPUD1-201ENST00000300302 TTC39AQ5SRH9 613 aa19.01■□□□□ 0.63
HERPUD1-201ENST00000300302 HSCBQ8IWL3 235 aa19.01■□□□□ 0.63
HERPUD1-201ENST00000300302 TBC1D2Q9BYX2 928 aa19.01■□□□□ 0.63
HERPUD1-201ENST00000300302 RAD50Q92878 1312 aa19.01■□□□□ 0.63
HERPUD1-201ENST00000300302 PUM3Q15397 648 aaKnown RBP19.01■□□□□ 0.63
HERPUD1-201ENST00000300302 SNX21Q969T3 373 aa19.01■□□□□ 0.63
HERPUD1-201ENST00000300302 PAG1Q9NWQ8 432 aa19■□□□□ 0.63
HERPUD1-201ENST00000300302 SPEF2Q9C093 1822 aa18.99■□□□□ 0.63
HERPUD1-201ENST00000300302 ADORA1P30542 326 aa18.99■□□□□ 0.63
HERPUD1-201ENST00000300302 NFIXQ14938 502 aa18.99■□□□□ 0.63
HERPUD1-201ENST00000300302 ANKRD18AQ8IVF6 992 aa18.99■□□□□ 0.63
HERPUD1-201ENST00000300302 LPIN2Q92539 896 aa18.99■□□□□ 0.63
HERPUD1-201ENST00000300302 CAMKK2Q96RR4 588 aa18.99■□□□□ 0.63
HERPUD1-201ENST00000300302 IL25Q9H293 177 aa18.99■□□□□ 0.63
HERPUD1-201ENST00000300302 ANAPC15P60006 121 aa18.99■□□□□ 0.63
HERPUD1-201ENST00000300302 KBTBD3Q8NAB2 608 aa18.99■□□□□ 0.63
HERPUD1-201ENST00000300302 NMIQ13287 307 aaPredicted RBP18.98■□□□□ 0.63
HERPUD1-201ENST00000300302 SF3B2Q13435 895 aaKnown RBP18.98■□□□□ 0.63
HERPUD1-201ENST00000300302 DEFB132Q7Z7B7 95 aa18.98■□□□□ 0.63
HERPUD1-201ENST00000300302 AKT1S1Q96B36 256 aa18.98■□□□□ 0.63
HERPUD1-201ENST00000300302 EDC3Q96F86 508 aaKnown RBP18.98■□□□□ 0.63
HERPUD1-201ENST00000300302 ANP32EQ9BTT0 268 aa18.98■□□□□ 0.63
HERPUD1-201ENST00000300302 CASZ1Q86V15 1759 aa18.98■□□□□ 0.63
HERPUD1-201ENST00000300302 GOLIM4O00461 696 aa18.97■□□□□ 0.63
HERPUD1-201ENST00000300302 GYS1P13807 737 aa18.97■□□□□ 0.63
HERPUD1-201ENST00000300302 SLC5A1P13866 664 aa18.97■□□□□ 0.63
HERPUD1-201ENST00000300302 C3orf67Q6ZVT6 689 aa18.97■□□□□ 0.63
HERPUD1-201ENST00000300302 DDX46Q7L014 1031 aaKnown RBP18.97■□□□□ 0.63
HERPUD1-201ENST00000300302 CNBD1Q8NA66 436 aa18.97■□□□□ 0.63
HERPUD1-201ENST00000300302 ZNF512BQ96KM6 892 aaPredicted RBP18.97■□□□□ 0.63
HERPUD1-201ENST00000300302 TFCP2L1Q9NZI6 479 aa18.97■□□□□ 0.63
HERPUD1-201ENST00000300302 LRRFIP1Q32MZ4 808 aaKnown RBP18.97■□□□□ 0.63
HERPUD1-201ENST00000300302 LSG1Q9H089 658 aaKnown RBP18.97■□□□□ 0.63
HERPUD1-201ENST00000300302 SNRKQ9NRH2 765 aa18.97■□□□□ 0.63
HERPUD1-201ENST00000300302 NDUFB9Q9Y6M9 179 aa18.97■□□□□ 0.63
HERPUD1-201ENST00000300302 FGFR2P21802 821 aa18.96■□□□□ 0.63
HERPUD1-201ENST00000300302 FAM227BQ96M60 508 aa18.96■□□□□ 0.63
HERPUD1-201ENST00000300302 BSDC1Q9NW68 430 aaPredicted RBP18.96■□□□□ 0.63
HERPUD1-201ENST00000300302 RGPD3A6NKT7 1758 aaPredicted RBP18.95■□□□□ 0.62
HERPUD1-201ENST00000300302 RGPD4Q7Z3J3 1758 aa18.95■□□□□ 0.62
HERPUD1-201ENST00000300302 HSPA4P34932 840 aa18.95■□□□□ 0.62
HERPUD1-201ENST00000300302 HELBQ8NG08 1087 aaPredicted RBP18.95■□□□□ 0.62
HERPUD1-201ENST00000300302 ARAP2Q8WZ64 1704 aa18.95■□□□□ 0.62
HERPUD1-201ENST00000300302 BAG6P46379 1132 aa18.94■□□□□ 0.62
HERPUD1-201ENST00000300302 FKBP4Q02790 459 aaKnown RBP eCLIP18.94■□□□□ 0.62
HERPUD1-201ENST00000300302 CHRNDQ07001 517 aa18.94■□□□□ 0.62
HERPUD1-201ENST00000300302 FLAD1Q8NFF5 587 aa18.94■□□□□ 0.62
HERPUD1-201ENST00000300302 A0A0D9SFI3 127 aa18.94■□□□□ 0.62
HERPUD1-201ENST00000300302 ST18O60284 1047 aa18.94■□□□□ 0.62
HERPUD1-201ENST00000300302 UQCRFS1P1P0C7P4 283 aa18.94■□□□□ 0.62
HERPUD1-201ENST00000300302 IL27Q8NEV9 243 aa18.94■□□□□ 0.62
HERPUD1-201ENST00000300302 TAF5LO75529 589 aa18.93■□□□□ 0.62
HERPUD1-201ENST00000300302 IL17RAQ96F46 866 aa18.93■□□□□ 0.62
HERPUD1-201ENST00000300302 TM4SF1P30408 202 aa18.92■□□□□ 0.62
HERPUD1-201ENST00000300302 RPS8P62241 208 aaKnown RBP18.92■□□□□ 0.62
HERPUD1-201ENST00000300302 ST5P78524 1137 aa18.92■□□□□ 0.62
HERPUD1-201ENST00000300302 CCDC102BQ68D86 513 aa18.92■□□□□ 0.62
HERPUD1-201ENST00000300302 ANO8Q9HCE9 1232 aaPredicted RBP18.92■□□□□ 0.62
HERPUD1-201ENST00000300302 CCDC171Q6TFL3 1326 aa18.92■□□□□ 0.62
HERPUD1-201ENST00000300302 MED23Q9ULK4 1368 aa18.92■□□□□ 0.62
HERPUD1-201ENST00000300302 ARID4AP29374 1257 aaPredicted RBP18.92■□□□□ 0.62
HERPUD1-201ENST00000300302 COL23A1Q86Y22 540 aaPredicted RBP18.92■□□□□ 0.62
HERPUD1-201ENST00000300302 CCDC24Q8N4L8 307 aa18.92■□□□□ 0.62
HERPUD1-201ENST00000300302 SERPINB2P05120 415 aa18.91■□□□□ 0.62
HERPUD1-201ENST00000300302 TTF1Q15361 905 aaPredicted RBP18.91■□□□□ 0.62
HERPUD1-201ENST00000300302 MCMDC2Q4G0Z9 681 aa18.91■□□□□ 0.62
HERPUD1-201ENST00000300302 PRR5LQ6MZQ0 368 aa18.91■□□□□ 0.62
HERPUD1-201ENST00000300302 CELF1Q92879 486 aaKnown RBP18.91■□□□□ 0.62
HERPUD1-201ENST00000300302 K7ELQ4 463 aaPredicted RBP18.9■□□□□ 0.62
HERPUD1-201ENST00000300302 ZFYP08048 801 aaPredicted RBP18.9■□□□□ 0.62
HERPUD1-201ENST00000300302 MCAMP43121 646 aa18.9■□□□□ 0.62
HERPUD1-201ENST00000300302 SCARF1Q14162 830 aa18.9■□□□□ 0.62
HERPUD1-201ENST00000300302 HELLSQ9NRZ9 838 aa18.9■□□□□ 0.62
HERPUD1-201ENST00000300302 PALD1Q9ULE6 856 aa18.9■□□□□ 0.62
HERPUD1-201ENST00000300302 ZAP70P43403 619 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms