RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 NLRP3Q96P20 1036 aa13.28□□□□□ -0.28
VWA3A-201ENST00000299840 DICER1Q9UPY3 1922 aaKnown RBP13.27□□□□□ -0.28
VWA3A-201ENST00000299840 NEURL1BA8MQ27 555 aa13.27□□□□□ -0.29
VWA3A-201ENST00000299840 LINS1Q8NG48 757 aa13.27□□□□□ -0.29
VWA3A-201ENST00000299840 CRAMP1Q96RY5 1269 aa13.27□□□□□ -0.29
VWA3A-201ENST00000299840 CCDC94Q9BW85 323 aaPredicted RBP13.27□□□□□ -0.29
VWA3A-201ENST00000299840 CGNQ9P2M7 1197 aaKnown RBP13.27□□□□□ -0.29
VWA3A-201ENST00000299840 CDHR2Q9BYE9 1310 aa13.27□□□□□ -0.29
VWA3A-201ENST00000299840 ALDH1B1P30837 517 aa13.27□□□□□ -0.29
VWA3A-201ENST00000299840 RARSP54136 660 aaKnown RBP13.26□□□□□ -0.29
VWA3A-201ENST00000299840 SF3B3Q15393 1217 aaKnown RBP13.26□□□□□ -0.29
VWA3A-201ENST00000299840 SYNE4Q8N205 404 aa13.26□□□□□ -0.29
VWA3A-201ENST00000299840 BEND3Q5T5X7 828 aa13.26□□□□□ -0.29
VWA3A-201ENST00000299840 CEP120Q8N960 986 aa13.26□□□□□ -0.29
VWA3A-201ENST00000299840 FAM89AQ96GI7 184 aa13.26□□□□□ -0.29
VWA3A-201ENST00000299840 TAF1P21675 1872 aa13.25□□□□□ -0.29
VWA3A-201ENST00000299840 H7C1W4 665 aa13.25□□□□□ -0.29
VWA3A-201ENST00000299840 XRCC6P12956 609 aaKnown RBP eCLIP13.25□□□□□ -0.29
VWA3A-201ENST00000299840 C3orf67Q6ZVT6 689 aa13.25□□□□□ -0.29
VWA3A-201ENST00000299840 C7orf43Q8WVR3 580 aa13.25□□□□□ -0.29
VWA3A-201ENST00000299840 RBM17Q96I25 401 aaKnown RBP13.25□□□□□ -0.29
VWA3A-201ENST00000299840 IRS4O14654 1257 aaPredicted RBP13.24□□□□□ -0.29
VWA3A-201ENST00000299840 ALDH1L1O75891 902 aa13.24□□□□□ -0.29
VWA3A-201ENST00000299840 HCLS1P14317 486 aaPredicted RBP13.24□□□□□ -0.29
VWA3A-201ENST00000299840 GCKRQ14397 625 aa13.24□□□□□ -0.29
VWA3A-201ENST00000299840 RPGRQ92834 1020 aaKnown RBP13.24□□□□□ -0.29
VWA3A-201ENST00000299840 SMC4Q9NTJ3 1288 aa13.24□□□□□ -0.29
VWA3A-201ENST00000299840 WWC3Q9ULE0 1092 aa13.24□□□□□ -0.29
VWA3A-201ENST00000299840 CWF19L2Q2TBE0 894 aaKnown RBP13.24□□□□□ -0.29
VWA3A-201ENST00000299840 SOGA3Q5TF21 947 aa13.24□□□□□ -0.29
VWA3A-201ENST00000299840 PRPF40BQ6NWY9 871 aaKnown RBP13.24□□□□□ -0.29
VWA3A-201ENST00000299840 F6X3S4 739 aa13.23□□□□□ -0.29
VWA3A-201ENST00000299840 NBPF20Q3BBV1 942 aa13.23□□□□□ -0.29
VWA3A-201ENST00000299840 PLA2G12BQ9BX93 195 aa13.23□□□□□ -0.29
VWA3A-201ENST00000299840 LRRC37AA6NMS7 1700 aa13.23□□□□□ -0.29
VWA3A-201ENST00000299840 PDE8AO60658 829 aa13.23□□□□□ -0.29
VWA3A-201ENST00000299840 PRR29P0C7W0 189 aa13.23□□□□□ -0.29
VWA3A-201ENST00000299840 CASP7P55210 303 aa13.23□□□□□ -0.29
VWA3A-201ENST00000299840 ARHGAP45Q92619 1136 aa13.23□□□□□ -0.29
VWA3A-201ENST00000299840 SH3BP1Q9Y3L3 701 aa13.23□□□□□ -0.29
VWA3A-201ENST00000299840 ARHGAP27Q6ZUM4 889 aa13.22□□□□□ -0.29
VWA3A-201ENST00000299840 LTBP3Q9NS15 1303 aa13.22□□□□□ -0.29
VWA3A-201ENST00000299840 CC2D2BQ6DHV5 1058 aa13.22□□□□□ -0.29
VWA3A-201ENST00000299840 SNED1Q8TER0 1413 aa13.22□□□□□ -0.29
VWA3A-201ENST00000299840 ZNF526Q8TF50 670 aaPredicted RBP13.22□□□□□ -0.29
VWA3A-201ENST00000299840 KIF16BQ96L93 1317 aa13.22□□□□□ -0.29
VWA3A-201ENST00000299840 BCL2L13Q9BXK5 485 aa13.21□□□□□ -0.29
VWA3A-201ENST00000299840 SRCIN1Q9C0H9 1055 aa13.21□□□□□ -0.29
VWA3A-201ENST00000299840 C21orf2O43822 256 aa13.21□□□□□ -0.29
VWA3A-201ENST00000299840 BBOX1O75936 387 aa13.21□□□□□ -0.29
VWA3A-201ENST00000299840 API5Q9BZZ5 524 aaKnown RBP13.21□□□□□ -0.29
VWA3A-201ENST00000299840 RTL9Q8NET4 1388 aa13.21□□□□□ -0.29
VWA3A-201ENST00000299840 ABCC4O15439 1325 aa13.21□□□□□ -0.3
VWA3A-201ENST00000299840 ANAPC15P60006 121 aa13.2□□□□□ -0.3
VWA3A-201ENST00000299840 DDX46Q7L014 1031 aaKnown RBP13.2□□□□□ -0.3
VWA3A-201ENST00000299840 TMC4Q7Z404 712 aa13.2□□□□□ -0.3
VWA3A-201ENST00000299840 NOB1Q9ULX3 412 aaKnown RBP13.2□□□□□ -0.3
VWA3A-201ENST00000299840 UTYO14607 1347 aa13.2□□□□□ -0.3
VWA3A-201ENST00000299840 PDE4AP27815 886 aa13.2□□□□□ -0.3
VWA3A-201ENST00000299840 GRAPQ13588 217 aa13.2□□□□□ -0.3
VWA3A-201ENST00000299840 CCDC93Q567U6 631 aa13.2□□□□□ -0.3
VWA3A-201ENST00000299840 GPATCH11Q8N954 259 aa13.2□□□□□ -0.3
VWA3A-201ENST00000299840 GRAPLQ8TC17 118 aaPredicted RBP13.2□□□□□ -0.3
VWA3A-201ENST00000299840 NFKBIEO00221 500 aa13.19□□□□□ -0.3
VWA3A-201ENST00000299840 PPEF1O14829 653 aaPredicted RBP13.19□□□□□ -0.3
VWA3A-201ENST00000299840 IRF6O14896 467 aa13.19□□□□□ -0.3
VWA3A-201ENST00000299840 CCDC152Q4G0S7 254 aa13.19□□□□□ -0.3
VWA3A-201ENST00000299840 UBE3BQ7Z3V4 1068 aa13.19□□□□□ -0.3
VWA3A-201ENST00000299840 RTKN2Q8IZC4 609 aa13.19□□□□□ -0.3
VWA3A-201ENST00000299840 BANK1Q8NDB2 785 aa13.19□□□□□ -0.3
VWA3A-201ENST00000299840 JARID2Q92833 1246 aaPredicted RBP13.19□□□□□ -0.3
VWA3A-201ENST00000299840 GRM8O00222 908 aa13.18□□□□□ -0.3
VWA3A-201ENST00000299840 IPO8O15397 1037 aaKnown RBP13.18□□□□□ -0.3
VWA3A-201ENST00000299840 OFD1O75665 1012 aa13.18□□□□□ -0.3
VWA3A-201ENST00000299840 CTSWP56202 376 aa13.18□□□□□ -0.3
VWA3A-201ENST00000299840 SLC4A10Q6U841 1118 aa13.18□□□□□ -0.3
VWA3A-201ENST00000299840 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.18□□□□□ -0.3
VWA3A-201ENST00000299840 SP8Q8IXZ3 490 aa13.18□□□□□ -0.3
VWA3A-201ENST00000299840 ATP6V0A2Q9Y487 856 aa13.18□□□□□ -0.3
VWA3A-201ENST00000299840 TIAM2Q8IVF5 1701 aa13.18□□□□□ -0.3
VWA3A-201ENST00000299840 COL4A1P02462 1669 aa13.18□□□□□ -0.3
VWA3A-201ENST00000299840 SPEF2Q9C093 1822 aa13.18□□□□□ -0.3
VWA3A-201ENST00000299840 CSF1RP07333 972 aa13.18□□□□□ -0.3
VWA3A-201ENST00000299840 YY1P25490 414 aa13.18□□□□□ -0.3
VWA3A-201ENST00000299840 TTLL11Q8NHH1 800 aa13.18□□□□□ -0.3
VWA3A-201ENST00000299840 BACH2Q9BYV9 841 aa13.18□□□□□ -0.3
VWA3A-201ENST00000299840 LTBP1Q14766 1721 aa13.17□□□□□ -0.3
VWA3A-201ENST00000299840 CCT4P50991 539 aaKnown RBP13.17□□□□□ -0.3
VWA3A-201ENST00000299840 ZBTB9Q96C00 473 aa13.17□□□□□ -0.3
VWA3A-201ENST00000299840 BCAR3O75815 825 aa13.17□□□□□ -0.3
VWA3A-201ENST00000299840 FKBP4Q02790 459 aaKnown RBP eCLIP13.17□□□□□ -0.3
VWA3A-201ENST00000299840 SEMA3FQ13275 785 aa13.17□□□□□ -0.3
VWA3A-201ENST00000299840 ZC3H4Q9UPT8 1303 aaKnown RBP13.17□□□□□ -0.3
VWA3A-201ENST00000299840 LMNB1P20700 586 aa13.16□□□□□ -0.3
VWA3A-201ENST00000299840 KCNJ4P48050 445 aa13.16□□□□□ -0.3
VWA3A-201ENST00000299840 PANK2Q9BZ23 570 aa13.16□□□□□ -0.3
VWA3A-201ENST00000299840 TAOK3Q9H2K8 898 aa13.16□□□□□ -0.3
VWA3A-201ENST00000299840 C9orf78Q9NZ63 289 aaPredicted RBP13.16□□□□□ -0.3
VWA3A-201ENST00000299840 ZNF219Q9P2Y4 722 aaPredicted RBP13.16□□□□□ -0.3
VWA3A-201ENST00000299840 PRELPP51888 382 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms