RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 FAM177A1Q8N128 213 aaPredicted RBP8.22□□□□□ -1.09
RAG1-201ENST00000299440 NLGN1Q8N2Q7 840 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 CTNNBL1Q8WYA6 563 aaPredicted RBP8.22□□□□□ -1.09
RAG1-201ENST00000299440 ERLIN2O94905 339 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 MYCLP12524 364 aaPredicted RBP8.22□□□□□ -1.09
RAG1-201ENST00000299440 SPC24Q8NBT2 197 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 KRT23Q9C075 422 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 YEATS2Q9ULM3 1422 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 HARSP12081 509 aaKnown RBP8.22□□□□□ -1.09
RAG1-201ENST00000299440 ZNF790Q6PG37 636 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 FCHSD1Q86WN1 690 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 CNKSR1Q969H4 720 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 DENND2AQ9ULE3 1009 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 MAST3O60307 1309 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 PABPN1LA6NDY0 278 aaKnown RBP8.22□□□□□ -1.09
RAG1-201ENST00000299440 CTNNA2P26232 953 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 UBA7P41226 1012 aa8.22□□□□□ -1.09
RAG1-201ENST00000299440 CCDC40Q4G0X9 1142 aa8.21□□□□□ -1.09
RAG1-201ENST00000299440 NSMFQ6X4W1 530 aa8.21□□□□□ -1.09
RAG1-201ENST00000299440 CERKQ8TCT0 537 aa8.21□□□□□ -1.09
RAG1-201ENST00000299440 POLKQ9UBT6 870 aa8.21□□□□□ -1.09
RAG1-201ENST00000299440 FKBP15Q5T1M5 1219 aa8.21□□□□□ -1.1
RAG1-201ENST00000299440 RARSP54136 660 aaKnown RBP8.21□□□□□ -1.1
RAG1-201ENST00000299440 USPL1Q5W0Q7 1092 aa8.21□□□□□ -1.1
RAG1-201ENST00000299440 KIAA0825Q8IV33 1275 aa8.21□□□□□ -1.1
RAG1-201ENST00000299440 CCDC117Q8IWD4 279 aaPredicted RBP8.21□□□□□ -1.1
RAG1-201ENST00000299440 RRP36Q96EU6 259 aaKnown RBP8.21□□□□□ -1.1
RAG1-201ENST00000299440 LRRC2Q9BYS8 371 aa8.21□□□□□ -1.1
RAG1-201ENST00000299440 TNFAIP1Q13829 316 aa8.21□□□□□ -1.1
RAG1-201ENST00000299440 STX6O43752 255 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 DNA2P51530 1060 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 SLC5A4Q9NY91 659 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 M0QZ92 97 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 NOP2P46087 812 aaKnown RBP8.2□□□□□ -1.1
RAG1-201ENST00000299440 MRPS9P82933 396 aaKnown RBP8.2□□□□□ -1.1
RAG1-201ENST00000299440 TXLNBQ8N3L3 684 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 PDE8AO60658 829 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 ZBED4O75132 1171 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 KRT24Q2M2I5 525 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 DALRD3Q5D0E6 543 aaKnown RBP8.2□□□□□ -1.1
RAG1-201ENST00000299440 RNF169Q8NCN4 708 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 NBPF3Q9H094 633 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 SCNN1DP51172 638 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 TFCP2Q12800 502 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 JAKMIP3Q5VZ66 844 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 ZNF397Q8NF99 534 aaPredicted RBP8.2□□□□□ -1.1
RAG1-201ENST00000299440 RHPN1Q8TCX5 695 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.2□□□□□ -1.1
RAG1-201ENST00000299440 KLF18A0A0U1RQI7 1052 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 EPB41L2O43491 1005 aaKnown RBP8.2□□□□□ -1.1
RAG1-201ENST00000299440 ALDH1L1O75891 902 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 ZFYP08048 801 aaPredicted RBP8.2□□□□□ -1.1
RAG1-201ENST00000299440 CCDC184Q52MB2 194 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 KIAA1328Q86T90 577 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 UNC5CLQ8IV45 518 aa8.2□□□□□ -1.1
RAG1-201ENST00000299440 ORC3Q9UBD5 711 aaPredicted RBP8.2□□□□□ -1.1
RAG1-201ENST00000299440 TTF2Q9UNY4 1162 aaKnown RBP8.2□□□□□ -1.1
RAG1-201ENST00000299440 CCDC148Q8NFR7 591 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 TAF4BQ92750 862 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 PAG1Q9NWQ8 432 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 LETM1O95202 739 aaPredicted RBP8.19□□□□□ -1.1
RAG1-201ENST00000299440 AMPD3Q01432 767 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 CAMK4Q16566 473 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 RTN1Q16799 776 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 TAX1BP1Q86VP1 789 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 LINS1Q8NG48 757 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 MEIS3Q99687 375 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 TRIM6Q9C030 488 aaPredicted RBP8.19□□□□□ -1.1
RAG1-201ENST00000299440 NPHP4O75161 1426 aaPredicted RBP8.19□□□□□ -1.1
RAG1-201ENST00000299440 CHMP2AO43633 222 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 MCM5P33992 734 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 GNAQP50148 359 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.19□□□□□ -1.1
RAG1-201ENST00000299440 AATFQ9NY61 560 aaKnown RBP eCLIP8.19□□□□□ -1.1
RAG1-201ENST00000299440 ZBTB43O43298 467 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 NBPF7P0C2Y1 421 aaPredicted RBP8.19□□□□□ -1.1
RAG1-201ENST00000299440 BIRC2Q13490 618 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 TSPY26PQ9H489 355 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 SLC52A2Q9HAB3 445 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 ZFYVE16Q7Z3T8 1539 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 K7ELQ4 463 aaPredicted RBP8.19□□□□□ -1.1
RAG1-201ENST00000299440 TRIM27P14373 513 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 TDRD12Q587J7 1177 aaKnown RBP8.19□□□□□ -1.1
RAG1-201ENST00000299440 ZNF594Q96JF6 807 aaPredicted RBP8.19□□□□□ -1.1
RAG1-201ENST00000299440 CNNM2Q9H8M5 875 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 LGR6Q9HBX8 967 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 ZBTB24O43167 697 aaPredicted RBP8.19□□□□□ -1.1
RAG1-201ENST00000299440 MBD3O95983 291 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 VPS36Q86VN1 386 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 C8orf58Q8NAV2 365 aa8.19□□□□□ -1.1
RAG1-201ENST00000299440 TMEM2Q9UHN6 1383 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 CCDC192P0DO97 292 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 EN1Q05925 392 aaPredicted RBP8.18□□□□□ -1.1
RAG1-201ENST00000299440 NEK1Q96PY6 1258 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 ZKSCAN3Q9BRR0 538 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 CENPHQ9H3R5 247 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 NUP153P49790 1475 aaKnown RBP8.18□□□□□ -1.1
RAG1-201ENST00000299440 SORBS3O60504 671 aa8.18□□□□□ -1.1
RAG1-201ENST00000299440 PRKCSHP14314 528 aaPredicted RBP8.18□□□□□ -1.1
RAG1-201ENST00000299440 MTIF2P46199 727 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms