RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 NYXQ9GZU5 481 aa12.72□□□□□ -0.37
COPS2-201ENST00000299259 ERFEQ4G0M1 354 aa12.72□□□□□ -0.37
COPS2-201ENST00000299259 KIAA1211Q6ZU35 1233 aa12.72□□□□□ -0.37
COPS2-201ENST00000299259 VGLL2Q8N8G2 317 aa12.72□□□□□ -0.37
COPS2-201ENST00000299259 SETDB2Q96T68 719 aa12.72□□□□□ -0.37
COPS2-201ENST00000299259 MROH5Q6ZUA9 1318 aa12.72□□□□□ -0.37
COPS2-201ENST00000299259 TRAPPC3LQ5T215 181 aa12.71□□□□□ -0.37
COPS2-201ENST00000299259 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.71□□□□□ -0.37
COPS2-201ENST00000299259 EDC3Q96F86 508 aaKnown RBP12.71□□□□□ -0.37
COPS2-201ENST00000299259 XAGE2Q96GT9 111 aa12.71□□□□□ -0.37
COPS2-201ENST00000299259 GTF2E1P29083 439 aaPredicted RBP12.71□□□□□ -0.38
COPS2-201ENST00000299259 ADORA1P30542 326 aa12.71□□□□□ -0.38
COPS2-201ENST00000299259 ANAPC15P60006 121 aa12.71□□□□□ -0.38
COPS2-201ENST00000299259 NMIQ13287 307 aaPredicted RBP12.71□□□□□ -0.38
COPS2-201ENST00000299259 CCDC158Q5M9N0 1113 aa12.71□□□□□ -0.38
COPS2-201ENST00000299259 GORABQ5T7V8 394 aa12.71□□□□□ -0.38
COPS2-201ENST00000299259 NBPF5PQ86XG9 351 aaPredicted RBP12.71□□□□□ -0.38
COPS2-201ENST00000299259 MPHOSPH8Q99549 860 aa12.71□□□□□ -0.38
COPS2-201ENST00000299259 LSG1Q9H089 658 aaKnown RBP12.71□□□□□ -0.38
COPS2-201ENST00000299259 NDUFB9Q9Y6M9 179 aa12.71□□□□□ -0.38
COPS2-201ENST00000299259 CARMIL3Q8ND23 1372 aa12.7□□□□□ -0.38
COPS2-201ENST00000299259 MED23Q9ULK4 1368 aa12.7□□□□□ -0.38
COPS2-201ENST00000299259 MYO5AQ9Y4I1 1855 aaKnown RBP12.7□□□□□ -0.38
COPS2-201ENST00000299259 PDE8BO95263 885 aa12.7□□□□□ -0.38
COPS2-201ENST00000299259 IFIT1P09914 478 aaKnown RBP12.7□□□□□ -0.38
COPS2-201ENST00000299259 RXRBP28702 533 aa12.7□□□□□ -0.38
COPS2-201ENST00000299259 IGHMBP2P38935 993 aaKnown RBP12.7□□□□□ -0.38
COPS2-201ENST00000299259 TTC39AQ5SRH9 613 aa12.7□□□□□ -0.38
COPS2-201ENST00000299259 DDX46Q7L014 1031 aaKnown RBP12.7□□□□□ -0.38
COPS2-201ENST00000299259 FAM227BQ96M60 508 aa12.7□□□□□ -0.38
COPS2-201ENST00000299259 CDC5LQ99459 802 aaKnown RBP12.7□□□□□ -0.38
COPS2-201ENST00000299259 SEC31BQ9NQW1 1179 aa12.7□□□□□ -0.38
COPS2-201ENST00000299259 PAG1Q9NWQ8 432 aa12.7□□□□□ -0.38
COPS2-201ENST00000299259 DOCK2Q92608 1830 aa12.7□□□□□ -0.38
COPS2-201ENST00000299259 MYH13Q9UKX3 1938 aa12.69□□□□□ -0.38
COPS2-201ENST00000299259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.69□□□□□ -0.38
COPS2-201ENST00000299259 A0A0D9SFI3 127 aa12.69□□□□□ -0.38
COPS2-201ENST00000299259 PUM3Q15397 648 aaKnown RBP12.69□□□□□ -0.38
COPS2-201ENST00000299259 KBTBD3Q8NAB2 608 aa12.69□□□□□ -0.38
COPS2-201ENST00000299259 GOLIM4O00461 696 aa12.69□□□□□ -0.38
COPS2-201ENST00000299259 CD2BP2O95400 341 aaKnown RBP12.69□□□□□ -0.38
COPS2-201ENST00000299259 HMGB2P26583 209 aaKnown RBP12.69□□□□□ -0.38
COPS2-201ENST00000299259 SSFA2P28290 1259 aa12.69□□□□□ -0.38
COPS2-201ENST00000299259 HSPA4P34932 840 aa12.69□□□□□ -0.38
COPS2-201ENST00000299259 SF3B3Q15393 1217 aaKnown RBP12.69□□□□□ -0.38
COPS2-201ENST00000299259 TXNRD1Q16881 649 aa12.69□□□□□ -0.38
COPS2-201ENST00000299259 SNRKQ9NRH2 765 aa12.69□□□□□ -0.38
COPS2-201ENST00000299259 PALD1Q9ULE6 856 aa12.69□□□□□ -0.38
COPS2-201ENST00000299259 CCDC171Q6TFL3 1326 aa12.69□□□□□ -0.38
COPS2-201ENST00000299259 K7ELQ4 463 aaPredicted RBP12.68□□□□□ -0.38
COPS2-201ENST00000299259 ST18O60284 1047 aa12.68□□□□□ -0.38
COPS2-201ENST00000299259 SLC10A5Q5PT55 438 aa12.68□□□□□ -0.38
COPS2-201ENST00000299259 C3orf67Q6ZVT6 689 aa12.68□□□□□ -0.38
COPS2-201ENST00000299259 IL17RAQ96F46 866 aa12.68□□□□□ -0.38
COPS2-201ENST00000299259 SLKQ9H2G2 1235 aaPredicted RBP12.68□□□□□ -0.38
COPS2-201ENST00000299259 TPTE2Q6XPS3 522 aa12.67□□□□□ -0.38
COPS2-201ENST00000299259 TICAM2Q86XR7 235 aa12.67□□□□□ -0.38
COPS2-201ENST00000299259 NPHP1O15259 732 aa12.67□□□□□ -0.38
COPS2-201ENST00000299259 LPIN2Q92539 896 aa12.67□□□□□ -0.38
COPS2-201ENST00000299259 ANP32EQ9BTT0 268 aa12.67□□□□□ -0.38
COPS2-201ENST00000299259 SLC5A1P13866 664 aa12.66□□□□□ -0.38
COPS2-201ENST00000299259 FGFR2P21802 821 aa12.66□□□□□ -0.38
COPS2-201ENST00000299259 NFIXQ14938 502 aa12.66□□□□□ -0.38
COPS2-201ENST00000299259 ANKRD18AQ8IVF6 992 aa12.66□□□□□ -0.38
COPS2-201ENST00000299259 HELBQ8NG08 1087 aaPredicted RBP12.66□□□□□ -0.38
COPS2-201ENST00000299259 PTH1RQ03431 593 aa12.66□□□□□ -0.38
COPS2-201ENST00000299259 ZNF512BQ96KM6 892 aaPredicted RBP12.66□□□□□ -0.38
COPS2-201ENST00000299259 NLRP3Q96P20 1036 aa12.66□□□□□ -0.38
COPS2-201ENST00000299259 PLSCR1O15162 318 aa12.65□□□□□ -0.38
COPS2-201ENST00000299259 FKBP4Q02790 459 aaKnown RBP eCLIP12.65□□□□□ -0.38
COPS2-201ENST00000299259 SCARF1Q14162 830 aa12.65□□□□□ -0.38
COPS2-201ENST00000299259 ZNF589Q86UQ0 364 aaPredicted RBP12.65□□□□□ -0.38
COPS2-201ENST00000299259 PROM2Q8N271 834 aa12.65□□□□□ -0.38
COPS2-201ENST00000299259 CNBD1Q8NA66 436 aa12.65□□□□□ -0.38
COPS2-201ENST00000299259 SPRYD3Q8NCJ5 442 aa12.65□□□□□ -0.38
COPS2-201ENST00000299259 ANTXR1Q9H6X2 564 aa12.65□□□□□ -0.38
COPS2-201ENST00000299259 TAF5LO75529 589 aa12.64□□□□□ -0.39
COPS2-201ENST00000299259 APBA3O96018 575 aa12.64□□□□□ -0.39
COPS2-201ENST00000299259 GYS1P13807 737 aa12.64□□□□□ -0.39
COPS2-201ENST00000299259 ARID4AP29374 1257 aaPredicted RBP12.64□□□□□ -0.39
COPS2-201ENST00000299259 CHRNDQ07001 517 aa12.64□□□□□ -0.39
COPS2-201ENST00000299259 LRRFIP1Q32MZ4 808 aaKnown RBP12.64□□□□□ -0.39
COPS2-201ENST00000299259 NRXN2Q9P2S2 1712 aa12.64□□□□□ -0.39
COPS2-201ENST00000299259 LAMA4Q16363 1823 aa12.64□□□□□ -0.39
COPS2-201ENST00000299259 HSP90AA1P07900 732 aaKnown RBP12.64□□□□□ -0.39
COPS2-201ENST00000299259 UQCRFS1P1P0C7P4 283 aa12.64□□□□□ -0.39
COPS2-201ENST00000299259 MCAMP43121 646 aa12.64□□□□□ -0.39
COPS2-201ENST00000299259 KCNJ4P48050 445 aa12.64□□□□□ -0.39
COPS2-201ENST00000299259 NEK4P51957 841 aa12.64□□□□□ -0.39
COPS2-201ENST00000299259 MCMDC2Q4G0Z9 681 aa12.64□□□□□ -0.39
COPS2-201ENST00000299259 CCDC102BQ68D86 513 aa12.64□□□□□ -0.39
COPS2-201ENST00000299259 RBM8AQ9Y5S9 174 aaKnown RBP12.64□□□□□ -0.39
COPS2-201ENST00000299259 SNX14Q9Y5W7 946 aa12.64□□□□□ -0.39
COPS2-201ENST00000299259 ANKRD31Q8N7Z5 1873 aa12.63□□□□□ -0.39
COPS2-201ENST00000299259 ZAP70P43403 619 aa12.63□□□□□ -0.39
COPS2-201ENST00000299259 PHKA1P46020 1223 aa12.63□□□□□ -0.39
COPS2-201ENST00000299259 QSER1Q2KHR3 1735 aa12.63□□□□□ -0.39
COPS2-201ENST00000299259 PI16Q6UXB8 463 aa12.63□□□□□ -0.39
COPS2-201ENST00000299259 CCDC24Q8N4L8 307 aa12.63□□□□□ -0.39
COPS2-201ENST00000299259 FBXO41Q8TF61 875 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms