RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 MROH5Q6ZUA9 1318 aa30.2■■■□□ 2.43
GTF2A1-201ENST00000298173 ANKRD31Q8N7Z5 1873 aa30.2■■■□□ 2.42
GTF2A1-201ENST00000298173 ANKRD18AQ8IVF6 992 aa30.2■■■□□ 2.42
GTF2A1-201ENST00000298173 SLC16A10Q8TF71 515 aa30.2■■■□□ 2.42
GTF2A1-201ENST00000298173 ECHDC1Q9NTX5 307 aa30.2■■■□□ 2.42
GTF2A1-201ENST00000298173 METTL24Q5JXM2 366 aa30.19■■■□□ 2.42
GTF2A1-201ENST00000298173 BSDC1Q9NW68 430 aaPredicted RBP30.19■■■□□ 2.42
GTF2A1-201ENST00000298173 AKAP2Q9Y2D5 859 aa30.19■■■□□ 2.42
GTF2A1-201ENST00000298173 PDE8BO95263 885 aa30.18■■■□□ 2.42
GTF2A1-201ENST00000298173 TIMM10P62072 90 aa30.18■■■□□ 2.42
GTF2A1-201ENST00000298173 RPS8P62241 208 aaKnown RBP30.18■■■□□ 2.42
GTF2A1-201ENST00000298173 BRIP1Q9BX63 1249 aa30.18■■■□□ 2.42
GTF2A1-201ENST00000298173 ZNF609O15014 1411 aa30.18■■■□□ 2.42
GTF2A1-201ENST00000298173 DDX46Q7L014 1031 aaKnown RBP30.17■■■□□ 2.42
GTF2A1-201ENST00000298173 A0A1B0GUL7 405 aa30.17■■■□□ 2.42
GTF2A1-201ENST00000298173 DBNDD2Q9BQY9 259 aa30.17■■■□□ 2.42
GTF2A1-201ENST00000298173 TSHZ2Q9NRE2 1034 aa30.17■■■□□ 2.42
GTF2A1-201ENST00000298173 GLRX3O76003 335 aaKnown RBP30.15■■■□□ 2.42
GTF2A1-201ENST00000298173 SDSP20132 328 aa30.15■■■□□ 2.42
GTF2A1-201ENST00000298173 GPATCH3Q96I76 525 aa30.15■■■□□ 2.42
GTF2A1-201ENST00000298173 ERC2O15083 957 aa30.14■■■□□ 2.42
GTF2A1-201ENST00000298173 HOXA10P31260 410 aaPredicted RBP30.14■■■□□ 2.42
GTF2A1-201ENST00000298173 FGFR2P21802 821 aa30.14■■■□□ 2.41
GTF2A1-201ENST00000298173 NEUROD6Q96NK8 337 aa30.14■■■□□ 2.41
GTF2A1-201ENST00000298173 CHRNDQ07001 517 aa30.13■■■□□ 2.41
GTF2A1-201ENST00000298173 GRAPQ13588 217 aa30.12■■■□□ 2.41
GTF2A1-201ENST00000298173 GRAPLQ8TC17 118 aaPredicted RBP30.12■■■□□ 2.41
GTF2A1-201ENST00000298173 MINPP1Q9UNW1 487 aa30.12■■■□□ 2.41
GTF2A1-201ENST00000298173 A0A1B0GUL6 1792 aa30.12■■■□□ 2.41
GTF2A1-201ENST00000298173 ATP5JP18859 108 aa30.11■■■□□ 2.41
GTF2A1-201ENST00000298173 ATP2B3Q16720 1220 aa30.11■■■□□ 2.41
GTF2A1-201ENST00000298173 HELBQ8NG08 1087 aaPredicted RBP30.11■■■□□ 2.41
GTF2A1-201ENST00000298173 RPGRQ92834 1020 aaKnown RBP30.11■■■□□ 2.41
GTF2A1-201ENST00000298173 XAGE2Q96GT9 111 aa30.11■■■□□ 2.41
GTF2A1-201ENST00000298173 RBM17Q96I25 401 aaKnown RBP30.1■■■□□ 2.41
GTF2A1-201ENST00000298173 CRAMP1Q96RY5 1269 aa30.1■■■□□ 2.41
GTF2A1-201ENST00000298173 TAF5LO75529 589 aa30.09■■■□□ 2.41
GTF2A1-201ENST00000298173 PDE6BP35913 854 aa30.09■■■□□ 2.41
GTF2A1-201ENST00000298173 PUM3Q15397 648 aaKnown RBP30.09■■■□□ 2.41
GTF2A1-201ENST00000298173 LPIN2Q92539 896 aa30.08■■■□□ 2.41
GTF2A1-201ENST00000298173 SRGNP10124 158 aa30.07■■■□□ 2.41
GTF2A1-201ENST00000298173 ADORA1P30542 326 aa30.07■■■□□ 2.41
GTF2A1-201ENST00000298173 ARAP2Q8WZ64 1704 aa30.06■■■□□ 2.4
GTF2A1-201ENST00000298173 BBOX1O75936 387 aa30.05■■■□□ 2.4
GTF2A1-201ENST00000298173 BOLA2Q9H3K6 86 aa30.05■■■□□ 2.4
GTF2A1-201ENST00000298173 CDC45O75419 566 aa30.04■■■□□ 2.4
GTF2A1-201ENST00000298173 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.04■■■□□ 2.4
GTF2A1-201ENST00000298173 AK9Q5TCS8 1911 aa30.04■■■□□ 2.4
GTF2A1-201ENST00000298173 TRIM6-TRIM34B2RNG4 842 aa30.04■■■□□ 2.4
GTF2A1-201ENST00000298173 SNAP23O00161 211 aa30.04■■■□□ 2.4
GTF2A1-201ENST00000298173 SEC24BO95487 1268 aa30.04■■■□□ 2.4
GTF2A1-201ENST00000298173 TBC1D9Q6ZT07 1266 aa30.04■■■□□ 2.4
GTF2A1-201ENST00000298173 NPR1P16066 1061 aa30.03■■■□□ 2.4
GTF2A1-201ENST00000298173 ANKRD2Q9GZV1 360 aa30.03■■■□□ 2.4
GTF2A1-201ENST00000298173 COL11A2P13942 1736 aaPredicted RBP30.03■■■□□ 2.4
GTF2A1-201ENST00000298173 MAP4K4O95819 1239 aaPredicted RBP30.02■■■□□ 2.4
GTF2A1-201ENST00000298173 SLC5A1P13866 664 aa30.02■■■□□ 2.4
GTF2A1-201ENST00000298173 UBE4AQ14139 1066 aa30.02■■■□□ 2.4
GTF2A1-201ENST00000298173 CCDC158Q5M9N0 1113 aa30.02■■■□□ 2.4
GTF2A1-201ENST00000298173 RILPL2Q969X0 211 aa30.02■■■□□ 2.4
GTF2A1-201ENST00000298173 ZNF512BQ96KM6 892 aaPredicted RBP30.02■■■□□ 2.4
GTF2A1-201ENST00000298173 HAUS7Q99871 368 aa30.02■■■□□ 2.4
GTF2A1-201ENST00000298173 R3HDM1Q15032 1099 aaKnown RBP30.01■■■□□ 2.4
GTF2A1-201ENST00000298173 CNTROBQ8N137 903 aa30.01■■■□□ 2.4
GTF2A1-201ENST00000298173 MASTLQ96GX5 879 aa30.01■■■□□ 2.39
GTF2A1-201ENST00000298173 IFIT1P09914 478 aaKnown RBP30■■■□□ 2.39
GTF2A1-201ENST00000298173 GORABQ5T7V8 394 aa30■■■□□ 2.39
GTF2A1-201ENST00000298173 EVI5LQ96CN4 794 aa30■■■□□ 2.39
GTF2A1-201ENST00000298173 MTFR1LQ9H019 292 aa30■■■□□ 2.39
GTF2A1-201ENST00000298173 WTIPA6NIX2 430 aaPredicted RBP29.99■■■□□ 2.39
GTF2A1-201ENST00000298173 ALDH1B1P30837 517 aa29.98■■■□□ 2.39
GTF2A1-201ENST00000298173 ILDR2Q71H61 639 aa29.98■■■□□ 2.39
GTF2A1-201ENST00000298173 TMC4Q7Z404 712 aa29.98■■■□□ 2.39
GTF2A1-201ENST00000298173 AKAP11Q9UKA4 1901 aa29.98■■■□□ 2.39
GTF2A1-201ENST00000298173 ZBTB7AO95365 584 aa29.98■■■□□ 2.39
GTF2A1-201ENST00000298173 CCDC102BQ68D86 513 aa29.98■■■□□ 2.39
GTF2A1-201ENST00000298173 C10orf71Q711Q0 1435 aa29.97■■■□□ 2.39
GTF2A1-201ENST00000298173 TTC39AQ5SRH9 613 aa29.97■■■□□ 2.39
GTF2A1-201ENST00000298173 CHMLP26374 656 aa29.96■■■□□ 2.39
GTF2A1-201ENST00000298173 SLC51AQ86UW1 340 aa29.96■■■□□ 2.39
GTF2A1-201ENST00000298173 C2CD5Q86YS7 1000 aa29.96■■■□□ 2.39
GTF2A1-201ENST00000298173 LRRC37AA6NMS7 1700 aa29.95■■■□□ 2.39
GTF2A1-201ENST00000298173 H0YIN7 160 aa29.95■■■□□ 2.39
GTF2A1-201ENST00000298173 STYK1Q6J9G0 422 aa29.95■■■□□ 2.39
GTF2A1-201ENST00000298173 SP8Q8IXZ3 490 aa29.95■■■□□ 2.39
GTF2A1-201ENST00000298173 ARID4AP29374 1257 aaPredicted RBP29.95■■■□□ 2.38
GTF2A1-201ENST00000298173 PHKA1P46020 1223 aa29.95■■■□□ 2.38
GTF2A1-201ENST00000298173 KIF13BQ9NQT8 1826 aa29.94■■■□□ 2.38
GTF2A1-201ENST00000298173 SCARF1Q14162 830 aa29.94■■■□□ 2.38
GTF2A1-201ENST00000298173 EDC3Q96F86 508 aaKnown RBP29.94■■■□□ 2.38
GTF2A1-201ENST00000298173 LEMD3Q9Y2U8 911 aa29.94■■■□□ 2.38
GTF2A1-201ENST00000298173 RBM19Q9Y4C8 960 aaKnown RBP29.94■■■□□ 2.38
GTF2A1-201ENST00000298173 NDUFB9Q9Y6M9 179 aa29.94■■■□□ 2.38
GTF2A1-201ENST00000298173 ATF5Q9Y2D1 282 aaPredicted RBP29.93■■■□□ 2.38
GTF2A1-201ENST00000298173 ATP6V0A2Q9Y487 856 aa29.93■■■□□ 2.38
GTF2A1-201ENST00000298173 ZNF804BA4D1E1 1349 aa29.93■■■□□ 2.38
GTF2A1-201ENST00000298173 XDHP47989 1333 aa29.93■■■□□ 2.38
GTF2A1-201ENST00000298173 IRS2Q9Y4H2 1338 aa29.93■■■□□ 2.38
GTF2A1-201ENST00000298173 UQCRFS1P1P0C7P4 283 aa29.92■■■□□ 2.38
GTF2A1-201ENST00000298173 CASC1Q6TDU7 716 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms