RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 NRAPQ86VF7 1730 aa11.16□□□□□ -0.62
CLRN1-201ENST00000295911 LTBP4Q8N2S1 1624 aa11.16□□□□□ -0.62
CLRN1-201ENST00000295911 BCL9O00512 1426 aa11.15□□□□□ -0.62
CLRN1-201ENST00000295911 RFX7Q2KHR2 1363 aa11.15□□□□□ -0.62
CLRN1-201ENST00000295911 KLHDC4Q8TBB5 520 aa11.15□□□□□ -0.62
CLRN1-201ENST00000295911 TMX3Q96JJ7 454 aa11.15□□□□□ -0.62
CLRN1-201ENST00000295911 ZBTB3Q9H5J0 574 aa11.15□□□□□ -0.62
CLRN1-201ENST00000295911 ASAP1Q9ULH1 1129 aa11.15□□□□□ -0.62
CLRN1-201ENST00000295911 SPEF2Q9C093 1822 aa11.15□□□□□ -0.63
CLRN1-201ENST00000295911 DOT1LQ8TEK3 1739 aa11.14□□□□□ -0.63
CLRN1-201ENST00000295911 CIAO1O76071 339 aa11.14□□□□□ -0.63
CLRN1-201ENST00000295911 IL15P40933 162 aaPredicted RBP11.14□□□□□ -0.63
CLRN1-201ENST00000295911 TFCP2Q12800 502 aa11.14□□□□□ -0.63
CLRN1-201ENST00000295911 HSP90AB3PQ58FF7 597 aa11.14□□□□□ -0.63
CLRN1-201ENST00000295911 L1TD1Q5T7N2 865 aaKnown RBP11.14□□□□□ -0.63
CLRN1-201ENST00000295911 JARID2Q92833 1246 aaPredicted RBP11.14□□□□□ -0.63
CLRN1-201ENST00000295911 KCNB2Q92953 911 aa11.14□□□□□ -0.63
CLRN1-201ENST00000295911 TM6SF1Q9BZW5 370 aa11.14□□□□□ -0.63
CLRN1-201ENST00000295911 SNX14Q9Y5W7 946 aa11.14□□□□□ -0.63
CLRN1-201ENST00000295911 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.14□□□□□ -0.63
CLRN1-201ENST00000295911 CYP2E1P05181 493 aaPredicted RBP11.13□□□□□ -0.63
CLRN1-201ENST00000295911 SSFA2P28290 1259 aa11.13□□□□□ -0.63
CLRN1-201ENST00000295911 VARS2Q5ST30 1063 aaKnown RBP11.13□□□□□ -0.63
CLRN1-201ENST00000295911 DNAJC10Q8IXB1 793 aa11.13□□□□□ -0.63
CLRN1-201ENST00000295911 FSD1Q9BTV5 496 aa11.13□□□□□ -0.63
CLRN1-201ENST00000295911 IL25Q9H293 177 aa11.13□□□□□ -0.63
CLRN1-201ENST00000295911 BOLA2Q9H3K6 86 aa11.13□□□□□ -0.63
CLRN1-201ENST00000295911 CHMP3Q9Y3E7 222 aa11.13□□□□□ -0.63
CLRN1-201ENST00000295911 CCDC171Q6TFL3 1326 aa11.12□□□□□ -0.63
CLRN1-201ENST00000295911 MAP3K15Q6ZN16 1313 aa11.12□□□□□ -0.63
CLRN1-201ENST00000295911 BAG4O95429 457 aaKnown RBP11.12□□□□□ -0.63
CLRN1-201ENST00000295911 PCCAP05165 728 aaPredicted RBP11.12□□□□□ -0.63
CLRN1-201ENST00000295911 ZKSCAN1P17029 563 aaPredicted RBP11.12□□□□□ -0.63
CLRN1-201ENST00000295911 RNF20Q5VTR2 975 aa11.12□□□□□ -0.63
CLRN1-201ENST00000295911 TMC2Q8TDI7 906 aa11.12□□□□□ -0.63
CLRN1-201ENST00000295911 HAUS7Q99871 368 aa11.12□□□□□ -0.63
CLRN1-201ENST00000295911 PLA2G12BQ9BX93 195 aa11.12□□□□□ -0.63
CLRN1-201ENST00000295911 TLR7Q9NYK1 1049 aaKnown RBP11.12□□□□□ -0.63
CLRN1-201ENST00000295911 ISY1Q9ULR0 285 aaKnown RBP11.12□□□□□ -0.63
CLRN1-201ENST00000295911 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.12□□□□□ -0.63
CLRN1-201ENST00000295911 EYA2O00167 538 aa11.11□□□□□ -0.63
CLRN1-201ENST00000295911 GTPBP6O43824 516 aaPredicted RBP11.11□□□□□ -0.63
CLRN1-201ENST00000295911 MMRN1Q13201 1228 aa11.11□□□□□ -0.63
CLRN1-201ENST00000295911 NMIQ13287 307 aaPredicted RBP11.11□□□□□ -0.63
CLRN1-201ENST00000295911 NECTIN1Q15223 517 aa11.11□□□□□ -0.63
CLRN1-201ENST00000295911 CCDC57Q2TAC2 916 aa11.11□□□□□ -0.63
CLRN1-201ENST00000295911 GIGYF2Q6Y7W6 1299 aaKnown RBP11.11□□□□□ -0.63
CLRN1-201ENST00000295911 ZBTB38Q8NAP3 1195 aaPredicted RBP11.11□□□□□ -0.63
CLRN1-201ENST00000295911 MAP4K1Q92918 833 aa11.11□□□□□ -0.63
CLRN1-201ENST00000295911 DBNLQ9UJU6 430 aaKnown RBP11.11□□□□□ -0.63
CLRN1-201ENST00000295911 SPATA31A1Q5TZJ5 1347 aa11.11□□□□□ -0.63
CLRN1-201ENST00000295911 CDHR2Q9BYE9 1310 aa11.11□□□□□ -0.63
CLRN1-201ENST00000295911 CICQ96RK0 1608 aaPredicted RBP11.11□□□□□ -0.63
CLRN1-201ENST00000295911 ERVV-1B6SEH8 477 aa11.1□□□□□ -0.63
CLRN1-201ENST00000295911 CYP19A1P11511 503 aaPredicted RBP11.1□□□□□ -0.63
CLRN1-201ENST00000295911 PSMA5P28066 241 aa11.1□□□□□ -0.63
CLRN1-201ENST00000295911 KCNJ4P48050 445 aa11.1□□□□□ -0.63
CLRN1-201ENST00000295911 PTH1RQ03431 593 aa11.1□□□□□ -0.63
CLRN1-201ENST00000295911 VPS53Q5VIR6 699 aa11.1□□□□□ -0.63
CLRN1-201ENST00000295911 ATG9AQ7Z3C6 839 aa11.1□□□□□ -0.63
CLRN1-201ENST00000295911 ZGPATQ8N5A5 531 aaKnown RBP11.1□□□□□ -0.63
CLRN1-201ENST00000295911 ZSCAN31Q96LW9 406 aaPredicted RBP11.1□□□□□ -0.63
CLRN1-201ENST00000295911 TTC14Q96N46 770 aa11.1□□□□□ -0.63
CLRN1-201ENST00000295911 UPF3BQ9BZI7 483 aaKnown RBP11.1□□□□□ -0.63
CLRN1-201ENST00000295911 LIMCH1Q9UPQ0 1083 aa11.1□□□□□ -0.63
CLRN1-201ENST00000295911 AKAP2Q9Y2D5 859 aa11.1□□□□□ -0.63
CLRN1-201ENST00000295911 CYP46A1Q9Y6A2 500 aa11.1□□□□□ -0.63
CLRN1-201ENST00000295911 MYH7P12883 1935 aa11.1□□□□□ -0.63
CLRN1-201ENST00000295911 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLRN1-201ENST00000295911 HMG20BQ9P0W2 317 aa11.09□□□□□ -0.63
CLRN1-201ENST00000295911 CEP126Q9P2H0 1117 aa11.09□□□□□ -0.63
CLRN1-201ENST00000295911 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.09□□□□□ -0.63
CLRN1-201ENST00000295911 RBM8AQ9Y5S9 174 aaKnown RBP11.09□□□□□ -0.63
CLRN1-201ENST00000295911 MED23Q9ULK4 1368 aa11.09□□□□□ -0.63
CLRN1-201ENST00000295911 RREB1Q92766 1687 aa11.09□□□□□ -0.63
CLRN1-201ENST00000295911 GOLGA6L3A6NEY3 463 aa11.09□□□□□ -0.63
CLRN1-201ENST00000295911 TOM1O60784 492 aa11.09□□□□□ -0.63
CLRN1-201ENST00000295911 CSF1RP07333 972 aa11.09□□□□□ -0.63
CLRN1-201ENST00000295911 PDIA4P13667 645 aaKnown RBP11.09□□□□□ -0.63
CLRN1-201ENST00000295911 CASTP20810 708 aaKnown RBP11.09□□□□□ -0.63
CLRN1-201ENST00000295911 IL6STP40189 918 aaPredicted RBP11.09□□□□□ -0.63
CLRN1-201ENST00000295911 DDB1Q16531 1140 aa11.09□□□□□ -0.63
CLRN1-201ENST00000295911 LRRFIP1Q32MZ4 808 aaKnown RBP11.09□□□□□ -0.63
CLRN1-201ENST00000295911 TSGA10IPQ3SY00 556 aa11.09□□□□□ -0.63
CLRN1-201ENST00000295911 CREB3L3Q68CJ9 461 aa11.09□□□□□ -0.63
CLRN1-201ENST00000295911 PRPF40BQ6NWY9 871 aaKnown RBP11.09□□□□□ -0.63
CLRN1-201ENST00000295911 FAM227BQ96M60 508 aa11.09□□□□□ -0.63
CLRN1-201ENST00000295911 NEUROD6Q96NK8 337 aa11.09□□□□□ -0.63
CLRN1-201ENST00000295911 DBNDD2Q9BQY9 259 aa11.09□□□□□ -0.63
CLRN1-201ENST00000295911 SH2B1Q9NRF2 756 aaPredicted RBP11.09□□□□□ -0.63
CLRN1-201ENST00000295911 ZNF330Q9Y3S2 320 aaPredicted RBP11.09□□□□□ -0.63
CLRN1-201ENST00000295911 PALLDQ8WX93 1383 aa11.08□□□□□ -0.64
CLRN1-201ENST00000295911 JCADQ9P266 1359 aa11.08□□□□□ -0.64
CLRN1-201ENST00000295911 ZNF831Q5JPB2 1677 aa11.08□□□□□ -0.64
CLRN1-201ENST00000295911 ZNF609O15014 1411 aa11.08□□□□□ -0.64
CLRN1-201ENST00000295911 PRKCSHP14314 528 aaPredicted RBP11.08□□□□□ -0.64
CLRN1-201ENST00000295911 PRIM1P49642 420 aaKnown RBP11.08□□□□□ -0.64
CLRN1-201ENST00000295911 IFIT5Q13325 482 aaKnown RBP11.08□□□□□ -0.64
CLRN1-201ENST00000295911 KRT32Q14532 448 aa11.08□□□□□ -0.64
CLRN1-201ENST00000295911 ANKRD1Q15327 319 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms