RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 CFAP45Q9UL16 551 aa16.16■□□□□ 0.18
NCSTN-201ENST00000294785 CPDO75976 1380 aa16.16■□□□□ 0.18
NCSTN-201ENST00000294785 H7C1W4 665 aa16.16■□□□□ 0.18
NCSTN-201ENST00000294785 RESTQ13127 1097 aa16.16■□□□□ 0.18
NCSTN-201ENST00000294785 SMARCC2Q8TAQ2 1214 aa16.16■□□□□ 0.18
NCSTN-201ENST00000294785 KIF3AQ9Y496 699 aa16.16■□□□□ 0.18
NCSTN-201ENST00000294785 DTNBO60941 627 aa16.15■□□□□ 0.18
NCSTN-201ENST00000294785 ATF3P18847 181 aa16.15■□□□□ 0.18
NCSTN-201ENST00000294785 FAM173BQ6P4H8 233 aa16.15■□□□□ 0.18
NCSTN-201ENST00000294785 CHMP4CQ96CF2 233 aa16.15■□□□□ 0.18
NCSTN-201ENST00000294785 ZNF830Q96NB3 372 aaPredicted RBP16.15■□□□□ 0.18
NCSTN-201ENST00000294785 HSP90B1P14625 803 aaKnown RBP16.15■□□□□ 0.18
NCSTN-201ENST00000294785 LMBR1LQ6UX01 489 aa16.15■□□□□ 0.18
NCSTN-201ENST00000294785 H3BQV1 296 aa16.15■□□□□ 0.18
NCSTN-201ENST00000294785 AP5Z1O43299 807 aa16.15■□□□□ 0.18
NCSTN-201ENST00000294785 PFKFB2O60825 505 aa16.15■□□□□ 0.18
NCSTN-201ENST00000294785 FOXO4P98177 505 aa16.15■□□□□ 0.18
NCSTN-201ENST00000294785 PLCB2Q00722 1185 aa16.15■□□□□ 0.18
NCSTN-201ENST00000294785 IFFO2Q5TF58 517 aa16.15■□□□□ 0.18
NCSTN-201ENST00000294785 BRF1Q92994 677 aa16.15■□□□□ 0.18
NCSTN-201ENST00000294785 DNAJC5Q9H3Z4 198 aa16.15■□□□□ 0.18
NCSTN-201ENST00000294785 ATP5J2-PTCD1G3V325 749 aa16.14■□□□□ 0.17
NCSTN-201ENST00000294785 PTCD1O75127 700 aaKnown RBP16.14■□□□□ 0.17
NCSTN-201ENST00000294785 IL15P40933 162 aaPredicted RBP16.14■□□□□ 0.17
NCSTN-201ENST00000294785 DHX32Q7L7V1 743 aaKnown RBP16.14■□□□□ 0.17
NCSTN-201ENST00000294785 PAPPAQ13219 1627 aa16.14■□□□□ 0.17
NCSTN-201ENST00000294785 GTF2F1P35269 517 aaKnown RBP eCLIP16.14■□□□□ 0.17
NCSTN-201ENST00000294785 NAA16Q6N069 864 aaPredicted RBP16.14■□□□□ 0.17
NCSTN-201ENST00000294785 DDX46Q7L014 1031 aaKnown RBP16.14■□□□□ 0.17
NCSTN-201ENST00000294785 AGXT2Q9BYV1 514 aa16.14■□□□□ 0.17
NCSTN-201ENST00000294785 ATG3Q9NT62 314 aa16.14■□□□□ 0.17
NCSTN-201ENST00000294785 PAG1Q9NWQ8 432 aa16.14■□□□□ 0.17
NCSTN-201ENST00000294785 JAK2O60674 1132 aa16.13■□□□□ 0.17
NCSTN-201ENST00000294785 ATL3Q6DD88 541 aa16.13■□□□□ 0.17
NCSTN-201ENST00000294785 CCDC129Q6ZRS4 1044 aa16.13■□□□□ 0.17
NCSTN-201ENST00000294785 KIAA1524Q8TCG1 905 aa16.13■□□□□ 0.17
NCSTN-201ENST00000294785 SEC62Q99442 399 aaKnown RBP16.13■□□□□ 0.17
NCSTN-201ENST00000294785 CWC25Q9NXE8 425 aaPredicted RBP16.13■□□□□ 0.17
NCSTN-201ENST00000294785 FAM13BQ9NYF5 915 aa16.13■□□□□ 0.17
NCSTN-201ENST00000294785 TFIP11Q9UBB9 837 aaKnown RBP16.13■□□□□ 0.17
NCSTN-201ENST00000294785 CAMK4Q16566 473 aa16.13■□□□□ 0.17
NCSTN-201ENST00000294785 ATG9AQ7Z3C6 839 aa16.13■□□□□ 0.17
NCSTN-201ENST00000294785 JARID2Q92833 1246 aaPredicted RBP16.13■□□□□ 0.17
NCSTN-201ENST00000294785 PIP4K2AP48426 406 aaPredicted RBP16.12■□□□□ 0.17
NCSTN-201ENST00000294785 SCRN1Q12765 414 aa16.12■□□□□ 0.17
NCSTN-201ENST00000294785 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.12■□□□□ 0.17
NCSTN-201ENST00000294785 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.12■□□□□ 0.17
NCSTN-201ENST00000294785 FGD1P98174 961 aa16.12■□□□□ 0.17
NCSTN-201ENST00000294785 ZMYM1Q5SVZ6 1142 aa16.12■□□□□ 0.17
NCSTN-201ENST00000294785 BICD2Q8TD16 824 aa16.12■□□□□ 0.17
NCSTN-201ENST00000294785 CIAO1O76071 339 aa16.12■□□□□ 0.17
NCSTN-201ENST00000294785 RBM10P98175 930 aaKnown RBP16.12■□□□□ 0.17
NCSTN-201ENST00000294785 ANO6Q4KMQ2 910 aa16.12■□□□□ 0.17
NCSTN-201ENST00000294785 TDRD7Q8NHU6 1098 aaKnown RBP16.12■□□□□ 0.17
NCSTN-201ENST00000294785 PGBD1Q96JS3 809 aa16.12■□□□□ 0.17
NCSTN-201ENST00000294785 CHMP3Q9Y3E7 222 aa16.12■□□□□ 0.17
NCSTN-201ENST00000294785 NDUFB9Q9Y6M9 179 aa16.12■□□□□ 0.17
NCSTN-201ENST00000294785 CCDC191Q8NCU4 936 aa16.11■□□□□ 0.17
NCSTN-201ENST00000294785 CBX8Q9HC52 389 aa16.11■□□□□ 0.17
NCSTN-201ENST00000294785 PCDH11XQ9BZA7 1347 aa16.11■□□□□ 0.17
NCSTN-201ENST00000294785 PCDH11YQ9BZA8 1340 aa16.11■□□□□ 0.17
NCSTN-201ENST00000294785 EXOSC10Q01780 885 aaKnown RBP16.11■□□□□ 0.17
NCSTN-201ENST00000294785 STOX1Q6ZVD7 989 aa16.11■□□□□ 0.17
NCSTN-201ENST00000294785 MPNDQ8N594 471 aa16.11■□□□□ 0.17
NCSTN-201ENST00000294785 NSUN7Q8NE18 718 aaKnown RBP16.11■□□□□ 0.17
NCSTN-201ENST00000294785 KCNF1Q9H3M0 494 aa16.11■□□□□ 0.17
NCSTN-201ENST00000294785 CTAGE5O15320 804 aa16.1■□□□□ 0.17
NCSTN-201ENST00000294785 NR1I2O75469 434 aa16.1■□□□□ 0.17
NCSTN-201ENST00000294785 CKAP2LQ8IYA6 745 aa16.1■□□□□ 0.17
NCSTN-201ENST00000294785 FBXL16Q8N461 479 aa16.1■□□□□ 0.17
NCSTN-201ENST00000294785 NBPF26B4DH59 902 aa16.1■□□□□ 0.17
NCSTN-201ENST00000294785 GOLIM4O00461 696 aa16.1■□□□□ 0.17
NCSTN-201ENST00000294785 LRRFIP1Q32MZ4 808 aaKnown RBP16.1■□□□□ 0.17
NCSTN-201ENST00000294785 NBPF14Q5TI25 921 aa16.1■□□□□ 0.17
NCSTN-201ENST00000294785 NBPF10Q6P3W6 841 aaKnown RBP16.1■□□□□ 0.17
NCSTN-201ENST00000294785 LUZP1Q86V48 1076 aa16.1■□□□□ 0.17
NCSTN-201ENST00000294785 NBPF15Q8N660 670 aa16.1■□□□□ 0.17
NCSTN-201ENST00000294785 NEUROD6Q96NK8 337 aa16.1■□□□□ 0.17
NCSTN-201ENST00000294785 KCPQ6ZWJ8 1503 aa16.1■□□□□ 0.17
NCSTN-201ENST00000294785 ERVV-2B6SEH9 535 aa16.09■□□□□ 0.17
NCSTN-201ENST00000294785 EYA2O00167 538 aa16.09■□□□□ 0.17
NCSTN-201ENST00000294785 ZNF274Q96GC6 653 aaPredicted RBP16.09■□□□□ 0.17
NCSTN-201ENST00000294785 PLA2G4DQ86XP0 818 aa16.09■□□□□ 0.17
NCSTN-201ENST00000294785 RCOR1Q9UKL0 485 aa16.09■□□□□ 0.17
NCSTN-201ENST00000294785 SPATA31A3Q5VYP0 1347 aa16.09■□□□□ 0.17
NCSTN-201ENST00000294785 SALL1Q9NSC2 1324 aa16.09■□□□□ 0.17
NCSTN-201ENST00000294785 FBXO3Q9UK99 471 aa16.08■□□□□ 0.17
NCSTN-201ENST00000294785 RNF113AO15541 343 aaKnown RBP16.08■□□□□ 0.16
NCSTN-201ENST00000294785 CHGBP05060 677 aa16.08■□□□□ 0.16
NCSTN-201ENST00000294785 HSPD1P10809 573 aaKnown RBP16.08■□□□□ 0.16
NCSTN-201ENST00000294785 CADPS2Q86UW7 1296 aa16.08■□□□□ 0.16
NCSTN-201ENST00000294785 DDX11Q96FC9 970 aa16.08■□□□□ 0.16
NCSTN-201ENST00000294785 STRCP1A6NGW2 1772 aa16.08■□□□□ 0.16
NCSTN-201ENST00000294785 PTPDC1A2A3K4 754 aa16.08■□□□□ 0.16
NCSTN-201ENST00000294785 E7EWF7 191 aa16.08■□□□□ 0.16
NCSTN-201ENST00000294785 IFIT1P09914 478 aaKnown RBP16.08■□□□□ 0.16
NCSTN-201ENST00000294785 ADD1P35611 737 aaKnown RBP16.08■□□□□ 0.16
NCSTN-201ENST00000294785 ZNF165P49910 485 aa16.08■□□□□ 0.16
NCSTN-201ENST00000294785 CHAF1AQ13111 956 aaPredicted RBP16.08■□□□□ 0.16
NCSTN-201ENST00000294785 CHRNA2Q15822 529 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms