RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 CCDC129Q6ZRS4 1044 aa17.95■□□□□ 0.46
CCDC116-201ENST00000292779 MARCH10Q8NA82 808 aaPredicted RBP17.95■□□□□ 0.46
CCDC116-201ENST00000292779 ZBTB3Q9H5J0 574 aa17.95■□□□□ 0.46
CCDC116-201ENST00000292779 CWC25Q9NXE8 425 aaPredicted RBP17.95■□□□□ 0.46
CCDC116-201ENST00000292779 TJP1Q07157 1748 aa17.94■□□□□ 0.46
CCDC116-201ENST00000292779 VPS72Q15906 364 aa17.94■□□□□ 0.46
CCDC116-201ENST00000292779 DDX46Q7L014 1031 aaKnown RBP17.94■□□□□ 0.46
CCDC116-201ENST00000292779 SEC62Q99442 399 aaKnown RBP17.94■□□□□ 0.46
CCDC116-201ENST00000292779 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.94■□□□□ 0.46
CCDC116-201ENST00000292779 RFX7Q2KHR2 1363 aa17.94■□□□□ 0.46
CCDC116-201ENST00000292779 AFF2P51816 1311 aa17.94■□□□□ 0.46
CCDC116-201ENST00000292779 PAPPAQ13219 1627 aa17.94■□□□□ 0.46
CCDC116-201ENST00000292779 DOT1LQ8TEK3 1739 aa17.94■□□□□ 0.46
CCDC116-201ENST00000292779 CSPP1Q1MSJ5 1256 aa17.93■□□□□ 0.46
CCDC116-201ENST00000292779 MEX3CQ5U5Q3 659 aaKnown RBP17.93■□□□□ 0.46
CCDC116-201ENST00000292779 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.93■□□□□ 0.46
CCDC116-201ENST00000292779 ATG9AQ7Z3C6 839 aa17.93■□□□□ 0.46
CCDC116-201ENST00000292779 CDC37L1Q7L3B6 337 aa17.92■□□□□ 0.46
CCDC116-201ENST00000292779 PIGBQ92521 554 aa17.92■□□□□ 0.46
CCDC116-201ENST00000292779 LETM1O95202 739 aaPredicted RBP17.92■□□□□ 0.46
CCDC116-201ENST00000292779 STK3Q13188 491 aa17.92■□□□□ 0.46
CCDC116-201ENST00000292779 KRT32Q14532 448 aa17.92■□□□□ 0.46
CCDC116-201ENST00000292779 MCMDC2Q4G0Z9 681 aa17.92■□□□□ 0.46
CCDC116-201ENST00000292779 THRAP3Q9Y2W1 955 aaKnown RBP17.92■□□□□ 0.46
CCDC116-201ENST00000292779 DDB1Q16531 1140 aa17.91■□□□□ 0.46
CCDC116-201ENST00000292779 BARGINQ6ZT62 677 aa17.91■□□□□ 0.46
CCDC116-201ENST00000292779 NEUROD6Q96NK8 337 aa17.91■□□□□ 0.46
CCDC116-201ENST00000292779 ASAP1Q9ULH1 1129 aa17.91■□□□□ 0.46
CCDC116-201ENST00000292779 U3KPZ7 1027 aaPredicted RBP17.91■□□□□ 0.46
CCDC116-201ENST00000292779 PDCP20941 246 aa17.91■□□□□ 0.46
CCDC116-201ENST00000292779 FERMT3Q86UX7 667 aa17.91■□□□□ 0.46
CCDC116-201ENST00000292779 KBTBD3Q8NAB2 608 aa17.91■□□□□ 0.46
CCDC116-201ENST00000292779 FAM184AQ8NB25 1140 aa17.91■□□□□ 0.46
CCDC116-201ENST00000292779 NEK1Q96PY6 1258 aa17.91■□□□□ 0.46
CCDC116-201ENST00000292779 CCDC39Q9UFE4 941 aa17.91■□□□□ 0.46
CCDC116-201ENST00000292779 PDIA4P13667 645 aaKnown RBP17.9■□□□□ 0.46
CCDC116-201ENST00000292779 FAM182BQ5T319 152 aa17.9■□□□□ 0.46
CCDC116-201ENST00000292779 CCDC191Q8NCU4 936 aa17.9■□□□□ 0.46
CCDC116-201ENST00000292779 CYP21A2P08686 494 aa17.89■□□□□ 0.46
CCDC116-201ENST00000292779 TIMM10P62072 90 aa17.89■□□□□ 0.46
CCDC116-201ENST00000292779 ZKSCAN5Q9Y2L8 839 aa17.89■□□□□ 0.46
CCDC116-201ENST00000292779 LAMA4Q16363 1823 aa17.89■□□□□ 0.45
CCDC116-201ENST00000292779 FAM173BQ6P4H8 233 aa17.89■□□□□ 0.45
CCDC116-201ENST00000292779 ACSBG1Q96GR2 724 aa17.89■□□□□ 0.45
CCDC116-201ENST00000292779 GOLIM4O00461 696 aa17.88■□□□□ 0.45
CCDC116-201ENST00000292779 HCLS1P14317 486 aaPredicted RBP17.88■□□□□ 0.45
CCDC116-201ENST00000292779 UVSSAQ2YD98 709 aa17.88■□□□□ 0.45
CCDC116-201ENST00000292779 ZNF594Q96JF6 807 aaPredicted RBP17.88■□□□□ 0.45
CCDC116-201ENST00000292779 SH3TC1Q8TE82 1336 aa17.88■□□□□ 0.45
CCDC116-201ENST00000292779 ZNF500O60304 480 aaPredicted RBP17.88■□□□□ 0.45
CCDC116-201ENST00000292779 OFD1O75665 1012 aa17.88■□□□□ 0.45
CCDC116-201ENST00000292779 IL15P40933 162 aaPredicted RBP17.88■□□□□ 0.45
CCDC116-201ENST00000292779 KRT85P78386 507 aa17.88■□□□□ 0.45
CCDC116-201ENST00000292779 SLFNL1Q499Z3 407 aa17.88■□□□□ 0.45
CCDC116-201ENST00000292779 LRRC24Q50LG9 513 aa17.88■□□□□ 0.45
CCDC116-201ENST00000292779 GIMAP6Q6P9H5 292 aa17.88■□□□□ 0.45
CCDC116-201ENST00000292779 Q6ZUG5 572 aa17.88■□□□□ 0.45
CCDC116-201ENST00000292779 PTF1AQ7RTS3 328 aa17.88■□□□□ 0.45
CCDC116-201ENST00000292779 TTC6Q86TZ1 520 aa17.88■□□□□ 0.45
CCDC116-201ENST00000292779 GPR108Q9NPR9 543 aa17.88■□□□□ 0.45
CCDC116-201ENST00000292779 PAG1Q9NWQ8 432 aa17.88■□□□□ 0.45
CCDC116-201ENST00000292779 TMOD3Q9NYL9 352 aa17.88■□□□□ 0.45
CCDC116-201ENST00000292779 ZNF330Q9Y3S2 320 aaPredicted RBP17.88■□□□□ 0.45
CCDC116-201ENST00000292779 PALLDQ8WX93 1383 aa17.88■□□□□ 0.45
CCDC116-201ENST00000292779 EYA2O00167 538 aa17.87■□□□□ 0.45
CCDC116-201ENST00000292779 GTF3C6Q969F1 213 aa17.87■□□□□ 0.45
CCDC116-201ENST00000292779 SYTL4Q96C24 671 aaPredicted RBP17.87■□□□□ 0.45
CCDC116-201ENST00000292779 ATG3Q9NT62 314 aa17.87■□□□□ 0.45
CCDC116-201ENST00000292779 THSD7AQ9UPZ6 1657 aa17.87■□□□□ 0.45
CCDC116-201ENST00000292779 KCNQ2O43526 872 aa17.86■□□□□ 0.45
CCDC116-201ENST00000292779 FUCA2Q9BTY2 467 aa17.86■□□□□ 0.45
CCDC116-201ENST00000292779 BCL9O00512 1426 aa17.86■□□□□ 0.45
CCDC116-201ENST00000292779 JAK2O60674 1132 aa17.86■□□□□ 0.45
CCDC116-201ENST00000292779 MCM5P33992 734 aa17.86■□□□□ 0.45
CCDC116-201ENST00000292779 STOX1Q6ZVD7 989 aa17.86■□□□□ 0.45
CCDC116-201ENST00000292779 SLC4A9Q96Q91 983 aa17.86■□□□□ 0.45
CCDC116-201ENST00000292779 CDCA7Q9BWT1 371 aaPredicted RBP17.86■□□□□ 0.45
CCDC116-201ENST00000292779 USP25Q9UHP3 1055 aa17.86■□□□□ 0.45
CCDC116-201ENST00000292779 PTMAP06454 111 aaKnown RBP17.85■□□□□ 0.45
CCDC116-201ENST00000292779 HSP90B1P14625 803 aaKnown RBP17.85■□□□□ 0.45
CCDC116-201ENST00000292779 HELLSQ9NRZ9 838 aa17.85■□□□□ 0.45
CCDC116-201ENST00000292779 ATRNO75882 1429 aa17.85■□□□□ 0.45
CCDC116-201ENST00000292779 ELP1O95163 1332 aa17.85■□□□□ 0.45
CCDC116-201ENST00000292779 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.84■□□□□ 0.45
CCDC116-201ENST00000292779 GJD4Q96KN9 370 aaPredicted RBP17.84■□□□□ 0.45
CCDC116-201ENST00000292779 ISCA1Q9BUE6 129 aa17.84■□□□□ 0.45
CCDC116-201ENST00000292779 LRRC2Q9BYS8 371 aa17.84■□□□□ 0.45
CCDC116-201ENST00000292779 PUS3Q9BZE2 481 aaKnown RBP17.84■□□□□ 0.45
CCDC116-201ENST00000292779 A0A0G2JS52 829 aa17.84■□□□□ 0.45
CCDC116-201ENST00000292779 A0A1B0GUL7 405 aa17.84■□□□□ 0.45
CCDC116-201ENST00000292779 TCIRG1Q13488 830 aa17.84■□□□□ 0.45
CCDC116-201ENST00000292779 CIAO1O76071 339 aa17.83■□□□□ 0.45
CCDC116-201ENST00000292779 IFIT1P09914 478 aaKnown RBP17.83■□□□□ 0.45
CCDC116-201ENST00000292779 ZMYM1Q5SVZ6 1142 aa17.83■□□□□ 0.45
CCDC116-201ENST00000292779 BRF1Q92994 677 aa17.83■□□□□ 0.45
CCDC116-201ENST00000292779 TFIP11Q9UBB9 837 aaKnown RBP17.83■□□□□ 0.45
CCDC116-201ENST00000292779 DNAJC10Q8IXB1 793 aa17.83■□□□□ 0.44
CCDC116-201ENST00000292779 KLHL34Q8N239 644 aa17.83■□□□□ 0.44
CCDC116-201ENST00000292779 DSCC1Q9BVC3 393 aa17.83■□□□□ 0.44
CCDC116-201ENST00000292779 SCAND2PQ9GZW5 306 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms