RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 SOS2Q07890 1332 aaPredicted RBP13.23□□□□□ -0.29
NPC1L1-201ENST00000289547 NF2P35240 595 aa13.23□□□□□ -0.29
NPC1L1-201ENST00000289547 GTF2A1P52655 376 aaPredicted RBP13.23□□□□□ -0.29
NPC1L1-201ENST00000289547 USP31Q70CQ4 1352 aa13.23□□□□□ -0.29
NPC1L1-201ENST00000289547 GLRX3O76003 335 aaKnown RBP13.23□□□□□ -0.29
NPC1L1-201ENST00000289547 HS1BP3Q53T59 392 aa13.23□□□□□ -0.29
NPC1L1-201ENST00000289547 TTC12Q9H892 705 aaPredicted RBP13.23□□□□□ -0.29
NPC1L1-201ENST00000289547 FERMT3Q86UX7 667 aa13.23□□□□□ -0.29
NPC1L1-201ENST00000289547 ZNF396Q96N95 335 aaPredicted RBP13.23□□□□□ -0.29
NPC1L1-201ENST00000289547 CLIP2Q9UDT6 1046 aa13.23□□□□□ -0.29
NPC1L1-201ENST00000289547 CPSF1Q10570 1443 aaKnown RBP13.23□□□□□ -0.29
NPC1L1-201ENST00000289547 KIF20AO95235 890 aa13.22□□□□□ -0.29
NPC1L1-201ENST00000289547 POLR3DP05423 398 aaPredicted RBP13.22□□□□□ -0.29
NPC1L1-201ENST00000289547 HCLS1P14317 486 aaPredicted RBP13.22□□□□□ -0.29
NPC1L1-201ENST00000289547 SFPQP23246 707 aaKnown RBP eCLIP13.22□□□□□ -0.29
NPC1L1-201ENST00000289547 STK3Q13188 491 aa13.22□□□□□ -0.29
NPC1L1-201ENST00000289547 ZFP91Q96JP5 570 aaPredicted RBP13.22□□□□□ -0.29
NPC1L1-201ENST00000289547 NSFL1CQ9UNZ2 370 aaKnown RBP13.22□□□□□ -0.29
NPC1L1-201ENST00000289547 EXOC6BQ9Y2D4 811 aa13.22□□□□□ -0.29
NPC1L1-201ENST00000289547 A1BGP04217 495 aa13.22□□□□□ -0.29
NPC1L1-201ENST00000289547 RBM25P49756 843 aaKnown RBP13.22□□□□□ -0.29
NPC1L1-201ENST00000289547 SOGA3Q5TF21 947 aa13.22□□□□□ -0.29
NPC1L1-201ENST00000289547 SMARCE1Q969G3 411 aa13.22□□□□□ -0.29
NPC1L1-201ENST00000289547 BRMS1Q9HCU9 246 aa13.22□□□□□ -0.29
NPC1L1-201ENST00000289547 DEPDC5O75140 1603 aa13.22□□□□□ -0.29
NPC1L1-201ENST00000289547 CHL1O00533 1208 aa13.21□□□□□ -0.29
NPC1L1-201ENST00000289547 VWDEQ8N2E2 1590 aa13.21□□□□□ -0.29
NPC1L1-201ENST00000289547 TRIM27P14373 513 aa13.21□□□□□ -0.29
NPC1L1-201ENST00000289547 IL15P40933 162 aaPredicted RBP13.21□□□□□ -0.29
NPC1L1-201ENST00000289547 LMAN1P49257 510 aa13.21□□□□□ -0.29
NPC1L1-201ENST00000289547 EIF6P56537 245 aaKnown RBP13.21□□□□□ -0.29
NPC1L1-201ENST00000289547 SAFBQ15424 915 aaKnown RBP eCLIP13.21□□□□□ -0.29
NPC1L1-201ENST00000289547 FILIP1LQ4L180 1135 aa13.21□□□□□ -0.29
NPC1L1-201ENST00000289547 FAM182BQ5T319 152 aa13.21□□□□□ -0.29
NPC1L1-201ENST00000289547 LMBR1LQ6UX01 489 aa13.21□□□□□ -0.29
NPC1L1-201ENST00000289547 UVSSAQ2YD98 709 aa13.21□□□□□ -0.29
NPC1L1-201ENST00000289547 TECPR2O15040 1411 aa13.21□□□□□ -0.3
NPC1L1-201ENST00000289547 CDK12Q9NYV4 1490 aaPredicted RBP13.21□□□□□ -0.3
NPC1L1-201ENST00000289547 SLC27A3Q5K4L6 730 aa13.21□□□□□ -0.3
NPC1L1-201ENST00000289547 METTL22Q9BUU2 404 aaPredicted RBP13.21□□□□□ -0.3
NPC1L1-201ENST00000289547 VGLL3A8MV65 326 aa13.2□□□□□ -0.3
NPC1L1-201ENST00000289547 MRPL50Q8N5N7 158 aaKnown RBP13.2□□□□□ -0.3
NPC1L1-201ENST00000289547 CCDC47Q96A33 483 aaKnown RBP13.2□□□□□ -0.3
NPC1L1-201ENST00000289547 PDE8AO60658 829 aa13.2□□□□□ -0.3
NPC1L1-201ENST00000289547 PTPRUQ92729 1446 aa13.2□□□□□ -0.3
NPC1L1-201ENST00000289547 EIF4A1P60842 406 aaKnown RBP13.2□□□□□ -0.3
NPC1L1-201ENST00000289547 KIF13AQ9H1H9 1805 aa13.2□□□□□ -0.3
NPC1L1-201ENST00000289547 MTMR7Q9Y216 660 aa13.2□□□□□ -0.3
NPC1L1-201ENST00000289547 ARHGAP23Q9P227 1491 aa13.2□□□□□ -0.3
NPC1L1-201ENST00000289547 MSL1Q68DK7 614 aa13.2□□□□□ -0.3
NPC1L1-201ENST00000289547 PPFIBP1Q86W92 1011 aa13.2□□□□□ -0.3
NPC1L1-201ENST00000289547 CKAP2LQ8IYA6 745 aa13.2□□□□□ -0.3
NPC1L1-201ENST00000289547 NRXN1Q9ULB1 1477 aa13.19□□□□□ -0.3
NPC1L1-201ENST00000289547 PAXBP1Q9Y5B6 917 aa13.19□□□□□ -0.3
NPC1L1-201ENST00000289547 HLA-DOAP06340 250 aa13.19□□□□□ -0.3
NPC1L1-201ENST00000289547 CRKLP46109 303 aaKnown RBP13.19□□□□□ -0.3
NPC1L1-201ENST00000289547 ATP2B3Q16720 1220 aa13.19□□□□□ -0.3
NPC1L1-201ENST00000289547 CNKSR1Q969H4 720 aa13.19□□□□□ -0.3
NPC1L1-201ENST00000289547 MROH2AA6NES4 1674 aa13.19□□□□□ -0.3
NPC1L1-201ENST00000289547 QRICH2Q9H0J4 1663 aa13.19□□□□□ -0.3
NPC1L1-201ENST00000289547 CEP135Q66GS9 1140 aa13.19□□□□□ -0.3
NPC1L1-201ENST00000289547 JARID2Q92833 1246 aaPredicted RBP13.19□□□□□ -0.3
NPC1L1-201ENST00000289547 WWC3Q9ULE0 1092 aa13.19□□□□□ -0.3
NPC1L1-201ENST00000289547 CBFA2T2O43439 604 aa13.18□□□□□ -0.3
NPC1L1-201ENST00000289547 VAMP4O75379 141 aa13.18□□□□□ -0.3
NPC1L1-201ENST00000289547 IL6STP40189 918 aaPredicted RBP13.18□□□□□ -0.3
NPC1L1-201ENST00000289547 PALLDQ8WX93 1383 aa13.18□□□□□ -0.3
NPC1L1-201ENST00000289547 BARGINQ6ZT62 677 aa13.18□□□□□ -0.3
NPC1L1-201ENST00000289547 CCDC43Q96MW1 224 aaKnown RBP13.18□□□□□ -0.3
NPC1L1-201ENST00000289547 TMEM131LA2VDJ0 1609 aa13.18□□□□□ -0.3
NPC1L1-201ENST00000289547 SEC24BO95487 1268 aa13.18□□□□□ -0.3
NPC1L1-201ENST00000289547 ATP2B1P20020 1258 aa13.18□□□□□ -0.3
NPC1L1-201ENST00000289547 NUTM1Q86Y26 1132 aa13.18□□□□□ -0.3
NPC1L1-201ENST00000289547 MPHOSPH10O00566 681 aaKnown RBP13.18□□□□□ -0.3
NPC1L1-201ENST00000289547 MX1P20591 662 aa13.18□□□□□ -0.3
NPC1L1-201ENST00000289547 CRACR2AQ9BSW2 395 aa13.18□□□□□ -0.3
NPC1L1-201ENST00000289547 GBP3Q9H0R5 595 aa13.18□□□□□ -0.3
NPC1L1-201ENST00000289547 BCS1LQ9Y276 419 aa13.18□□□□□ -0.3
NPC1L1-201ENST00000289547 KDM4AO75164 1064 aa13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 ASAP1Q9ULH1 1129 aa13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 CFAP100Q494V2 611 aa13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 JAKMIP3Q5VZ66 844 aa13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 DPP8Q6V1X1 898 aaPredicted RBP13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 TBC1D9Q6ZT07 1266 aa13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 IL17REQ8NFR9 667 aa13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 GGA1Q9UJY5 639 aa13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 CFAP45Q9UL16 551 aa13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 SHTN1A0MZ66 631 aa13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 MAP4K4O95819 1239 aaPredicted RBP13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 TXLNBQ8N3L3 684 aa13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 ZSCAN31Q96LW9 406 aaPredicted RBP13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 JAKMIP1Q96N16 626 aaKnown RBP13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 PDRG1Q9NUG6 133 aa13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 SPATA31A1Q5TZJ5 1347 aa13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 MNAT1P51948 309 aa13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 UBAC1Q9BSL1 405 aa13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 NOL7Q9UMY1 257 aaKnown RBP13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 V9GYY5 206 aaPredicted RBP13.17□□□□□ -0.3
NPC1L1-201ENST00000289547 IQGAP1P46940 1657 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms