RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 H7C1W4 665 aa8.65□□□□□ -1.02
SSX2B-201ENST00000288839 PDE8AO60658 829 aa8.65□□□□□ -1.02
SSX2B-201ENST00000288839 ALDH1L1O75891 902 aa8.65□□□□□ -1.02
SSX2B-201ENST00000288839 CASP7P55210 303 aa8.65□□□□□ -1.02
SSX2B-201ENST00000288839 RBM17Q96I25 401 aaKnown RBP8.65□□□□□ -1.02
SSX2B-201ENST00000288839 API5Q9BZZ5 524 aaKnown RBP8.65□□□□□ -1.02
SSX2B-201ENST00000288839 COLQQ9Y215 455 aaPredicted RBP8.65□□□□□ -1.02
SSX2B-201ENST00000288839 LAMB2P55268 1798 aa8.65□□□□□ -1.02
SSX2B-201ENST00000288839 DDX60Q8IY21 1712 aaKnown RBP8.65□□□□□ -1.03
SSX2B-201ENST00000288839 SNED1Q8TER0 1413 aa8.64□□□□□ -1.03
SSX2B-201ENST00000288839 ABCC4O15439 1325 aa8.64□□□□□ -1.03
SSX2B-201ENST00000288839 CDHR2Q9BYE9 1310 aa8.64□□□□□ -1.03
SSX2B-201ENST00000288839 GRM8O00222 908 aa8.64□□□□□ -1.03
SSX2B-201ENST00000288839 TRIM27P14373 513 aa8.64□□□□□ -1.03
SSX2B-201ENST00000288839 HOXA10P31260 410 aaPredicted RBP8.64□□□□□ -1.03
SSX2B-201ENST00000288839 CTSWP56202 376 aa8.64□□□□□ -1.03
SSX2B-201ENST00000288839 DDX46Q7L014 1031 aaKnown RBP8.64□□□□□ -1.03
SSX2B-201ENST00000288839 CLUAP1Q96AJ1 413 aa8.64□□□□□ -1.03
SSX2B-201ENST00000288839 CRAMP1Q96RY5 1269 aa8.64□□□□□ -1.03
SSX2B-201ENST00000288839 C9orf78Q9NZ63 289 aaPredicted RBP8.64□□□□□ -1.03
SSX2B-201ENST00000288839 PPEF1O14829 653 aaPredicted RBP8.63□□□□□ -1.03
SSX2B-201ENST00000288839 IPO8O15397 1037 aaKnown RBP8.63□□□□□ -1.03
SSX2B-201ENST00000288839 ALDH1B1P30837 517 aa8.63□□□□□ -1.03
SSX2B-201ENST00000288839 GRAPQ13588 217 aa8.63□□□□□ -1.03
SSX2B-201ENST00000288839 SF3B3Q15393 1217 aaKnown RBP8.63□□□□□ -1.03
SSX2B-201ENST00000288839 ATF7IPQ6VMQ6 1270 aa8.63□□□□□ -1.03
SSX2B-201ENST00000288839 GRAPLQ8TC17 118 aaPredicted RBP8.63□□□□□ -1.03
SSX2B-201ENST00000288839 C7orf43Q8WVR3 580 aa8.63□□□□□ -1.03
SSX2B-201ENST00000288839 ARHGAP45Q92619 1136 aa8.63□□□□□ -1.03
SSX2B-201ENST00000288839 SUCLG2Q96I99 432 aa8.63□□□□□ -1.03
SSX2B-201ENST00000288839 SCUBE2Q9NQ36 999 aa8.63□□□□□ -1.03
SSX2B-201ENST00000288839 SEC31BQ9NQW1 1179 aa8.63□□□□□ -1.03
SSX2B-201ENST00000288839 RCAN3Q9UKA8 241 aa8.63□□□□□ -1.03
SSX2B-201ENST00000288839 TAF1P21675 1872 aa8.62□□□□□ -1.03
SSX2B-201ENST00000288839 ECM2O94769 699 aaPredicted RBP8.62□□□□□ -1.03
SSX2B-201ENST00000288839 NBPF7P0C2Y1 421 aaPredicted RBP8.62□□□□□ -1.03
SSX2B-201ENST00000288839 HSP90B1P14625 803 aaKnown RBP8.62□□□□□ -1.03
SSX2B-201ENST00000288839 CCT4P50991 539 aaKnown RBP8.62□□□□□ -1.03
SSX2B-201ENST00000288839 HTRA3P83110 453 aa8.62□□□□□ -1.03
SSX2B-201ENST00000288839 CCDC152Q4G0S7 254 aa8.62□□□□□ -1.03
SSX2B-201ENST00000288839 EPHA10Q5JZY3 1008 aa8.62□□□□□ -1.03
SSX2B-201ENST00000288839 ZKSCAN2Q63HK3 967 aa8.62□□□□□ -1.03
SSX2B-201ENST00000288839 TTLL11Q8NHH1 800 aa8.62□□□□□ -1.03
SSX2B-201ENST00000288839 CELF1Q92879 486 aaKnown RBP8.62□□□□□ -1.03
SSX2B-201ENST00000288839 PLA2G12BQ9BX93 195 aa8.62□□□□□ -1.03
SSX2B-201ENST00000288839 USP44Q9H0E7 712 aa8.62□□□□□ -1.03
SSX2B-201ENST00000288839 GREM2Q9H772 168 aa8.62□□□□□ -1.03
SSX2B-201ENST00000288839 DICER1Q9UPY3 1922 aaKnown RBP8.62□□□□□ -1.03
SSX2B-201ENST00000288839 PLIN1O60240 522 aa8.61□□□□□ -1.03
SSX2B-201ENST00000288839 RLBP1P12271 317 aa8.61□□□□□ -1.03
SSX2B-201ENST00000288839 LMNB1P20700 586 aa8.61□□□□□ -1.03
SSX2B-201ENST00000288839 FOXO4P98177 505 aa8.61□□□□□ -1.03
SSX2B-201ENST00000288839 PDAP1Q13442 181 aaKnown RBP8.61□□□□□ -1.03
SSX2B-201ENST00000288839 FAM161AQ3B820 660 aa8.61□□□□□ -1.03
SSX2B-201ENST00000288839 CCDC93Q567U6 631 aa8.61□□□□□ -1.03
SSX2B-201ENST00000288839 TMEM57Q8N5G2 664 aa8.61□□□□□ -1.03
SSX2B-201ENST00000288839 KAZALD1Q96I82 304 aa8.61□□□□□ -1.03
SSX2B-201ENST00000288839 TAOK3Q9H2K8 898 aa8.61□□□□□ -1.03
SSX2B-201ENST00000288839 ZNF277Q9NRM2 450 aaPredicted RBP8.61□□□□□ -1.03
SSX2B-201ENST00000288839 CHMP3Q9Y3E7 222 aa8.61□□□□□ -1.03
SSX2B-201ENST00000288839 UTYO14607 1347 aa8.6□□□□□ -1.03
SSX2B-201ENST00000288839 ZNF541Q9H0D2 1346 aa8.6□□□□□ -1.03
SSX2B-201ENST00000288839 BBOX1O75936 387 aa8.6□□□□□ -1.03
SSX2B-201ENST00000288839 CSF1RP07333 972 aa8.6□□□□□ -1.03
SSX2B-201ENST00000288839 ITGA6P23229 1130 aa8.6□□□□□ -1.03
SSX2B-201ENST00000288839 RPS8P62241 208 aaKnown RBP8.6□□□□□ -1.03
SSX2B-201ENST00000288839 SOGA3Q5TF21 947 aa8.6□□□□□ -1.03
SSX2B-201ENST00000288839 INTS3Q68E01 1043 aaKnown RBP8.6□□□□□ -1.03
SSX2B-201ENST00000288839 LMBR1LQ6UX01 489 aa8.6□□□□□ -1.03
SSX2B-201ENST00000288839 ANKRD18AQ8IVF6 992 aa8.6□□□□□ -1.03
SSX2B-201ENST00000288839 DZIP1LQ8IYY4 767 aaKnown RBP8.6□□□□□ -1.03
SSX2B-201ENST00000288839 MEIS3Q99687 375 aa8.6□□□□□ -1.03
SSX2B-201ENST00000288839 BICC1Q9H694 974 aaKnown RBP8.6□□□□□ -1.03
SSX2B-201ENST00000288839 RRAGCQ9HB90 399 aa8.6□□□□□ -1.03
SSX2B-201ENST00000288839 ATP6V0A2Q9Y487 856 aa8.6□□□□□ -1.03
SSX2B-201ENST00000288839 DUOX1Q9NRD9 1551 aa8.6□□□□□ -1.03
SSX2B-201ENST00000288839 WDR90Q96KV7 1748 aa8.6□□□□□ -1.03
SSX2B-201ENST00000288839 POTECB2RU33 542 aa8.59□□□□□ -1.03
SSX2B-201ENST00000288839 SEC24BO95487 1268 aa8.59□□□□□ -1.03
SSX2B-201ENST00000288839 UBTFL1P0CB47 393 aaPredicted RBP8.59□□□□□ -1.03
SSX2B-201ENST00000288839 FKBP4Q02790 459 aaKnown RBP eCLIP8.59□□□□□ -1.03
SSX2B-201ENST00000288839 ITPRIPQ8IWB1 547 aa8.59□□□□□ -1.03
SSX2B-201ENST00000288839 SP8Q8IXZ3 490 aa8.59□□□□□ -1.03
SSX2B-201ENST00000288839 FTSJ3Q8IY81 847 aaKnown RBP8.59□□□□□ -1.03
SSX2B-201ENST00000288839 RTKN2Q8IZC4 609 aa8.59□□□□□ -1.03
SSX2B-201ENST00000288839 ANKRD44Q8N8A2 993 aa8.59□□□□□ -1.03
SSX2B-201ENST00000288839 PANK1Q8TE04 598 aa8.59□□□□□ -1.03
SSX2B-201ENST00000288839 CDC5LQ99459 802 aaKnown RBP8.59□□□□□ -1.03
SSX2B-201ENST00000288839 LTBP1Q14766 1721 aa8.59□□□□□ -1.03
SSX2B-201ENST00000288839 RTL9Q8NET4 1388 aa8.59□□□□□ -1.03
SSX2B-201ENST00000288839 ANKRD18BA2A2Z9 1011 aa8.58□□□□□ -1.04
SSX2B-201ENST00000288839 RIOK3O14730 519 aaKnown RBP8.58□□□□□ -1.04
SSX2B-201ENST00000288839 HSPA6P17066 643 aa8.58□□□□□ -1.04
SSX2B-201ENST00000288839 GPSM2P81274 684 aa8.58□□□□□ -1.04
SSX2B-201ENST00000288839 IFIT5Q13325 482 aaKnown RBP8.58□□□□□ -1.04
SSX2B-201ENST00000288839 CC2D2BQ6DHV5 1058 aa8.58□□□□□ -1.04
SSX2B-201ENST00000288839 FAM163AQ96GL9 167 aaPredicted RBP8.58□□□□□ -1.04
SSX2B-201ENST00000288839 ZNF594Q96JF6 807 aaPredicted RBP8.58□□□□□ -1.04
SSX2B-201ENST00000288839 TMX4Q9H1E5 349 aaPredicted RBP8.58□□□□□ -1.04
SSX2B-201ENST00000288839 LRRFIP2Q9Y608 721 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms