RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 SETD1BQ9UPS6 1966 aaKnown RBP11.77□□□□□ -0.53
HMGCR-201ENST00000287936 AKAP17AQ02040 695 aaKnown RBP11.77□□□□□ -0.53
HMGCR-201ENST00000287936 C8orf76Q96K31 380 aa11.77□□□□□ -0.53
HMGCR-201ENST00000287936 PDCL3Q9H2J4 239 aa11.77□□□□□ -0.53
HMGCR-201ENST00000287936 RFX7Q2KHR2 1363 aa11.77□□□□□ -0.53
HMGCR-201ENST00000287936 UTYO14607 1347 aa11.76□□□□□ -0.53
HMGCR-201ENST00000287936 ZNF165P49910 485 aa11.76□□□□□ -0.53
HMGCR-201ENST00000287936 RBM10P98175 930 aaKnown RBP11.76□□□□□ -0.53
HMGCR-201ENST00000287936 SART3Q15020 963 aaKnown RBP11.76□□□□□ -0.53
HMGCR-201ENST00000287936 STX1AQ16623 288 aa11.76□□□□□ -0.53
HMGCR-201ENST00000287936 CDC37L1Q7L3B6 337 aa11.76□□□□□ -0.53
HMGCR-201ENST00000287936 DSCC1Q9BVC3 393 aa11.76□□□□□ -0.53
HMGCR-201ENST00000287936 ERVV-2B6SEH9 535 aa11.76□□□□□ -0.53
HMGCR-201ENST00000287936 ZNF213O14771 459 aa11.76□□□□□ -0.53
HMGCR-201ENST00000287936 NOLC1Q14978 699 aaKnown RBP eCLIP11.76□□□□□ -0.534e-6■■□□□ 11.4
HMGCR-201ENST00000287936 TTF1Q15361 905 aaPredicted RBP11.76□□□□□ -0.53
HMGCR-201ENST00000287936 TICAM2Q86XR7 235 aa11.76□□□□□ -0.53
HMGCR-201ENST00000287936 GTF3C6Q969F1 213 aa11.76□□□□□ -0.53
HMGCR-201ENST00000287936 GPR108Q9NPR9 543 aa11.76□□□□□ -0.53
HMGCR-201ENST00000287936 DBNLQ9UJU6 430 aaKnown RBP11.76□□□□□ -0.53
HMGCR-201ENST00000287936 AXIN2Q9Y2T1 843 aa11.76□□□□□ -0.53
HMGCR-201ENST00000287936 ELP1O95163 1332 aa11.76□□□□□ -0.53
HMGCR-201ENST00000287936 ANKRD18BA2A2Z9 1011 aa11.76□□□□□ -0.53
HMGCR-201ENST00000287936 LRRC2Q9BYS8 371 aa11.76□□□□□ -0.53
HMGCR-201ENST00000287936 CCDC129Q6ZRS4 1044 aa11.76□□□□□ -0.53
HMGCR-201ENST00000287936 CCAR1Q8IX12 1150 aaKnown RBP11.76□□□□□ -0.53
HMGCR-201ENST00000287936 NCOA7Q8NI08 942 aa11.76□□□□□ -0.53
HMGCR-201ENST00000287936 LARGE1O95461 756 aa11.75□□□□□ -0.53
HMGCR-201ENST00000287936 TPD52L1Q16890 204 aaPredicted RBP11.75□□□□□ -0.53
HMGCR-201ENST00000287936 ANO6Q4KMQ2 910 aa11.75□□□□□ -0.53
HMGCR-201ENST00000287936 CCDC85AQ96PX6 553 aaPredicted RBP11.75□□□□□ -0.53
HMGCR-201ENST00000287936 KIF13AQ9H1H9 1805 aa11.75□□□□□ -0.53
HMGCR-201ENST00000287936 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.75□□□□□ -0.53
HMGCR-201ENST00000287936 CACNA1FO60840 1977 aa11.75□□□□□ -0.53
HMGCR-201ENST00000287936 PTPDC1A2A3K4 754 aa11.75□□□□□ -0.53
HMGCR-201ENST00000287936 GOLGA8BA8MQT2 603 aa11.75□□□□□ -0.53
HMGCR-201ENST00000287936 FSIP1Q8NA03 581 aa11.75□□□□□ -0.53
HMGCR-201ENST00000287936 LEO1Q8WVC0 666 aaPredicted RBP11.75□□□□□ -0.53
HMGCR-201ENST00000287936 ARID3AQ99856 593 aa11.75□□□□□ -0.53
HMGCR-201ENST00000287936 RPAP1Q9BWH6 1393 aaPredicted RBP11.75□□□□□ -0.53
HMGCR-201ENST00000287936 PTPN12Q05209 780 aaKnown RBP11.74□□□□□ -0.53
HMGCR-201ENST00000287936 EDC3Q96F86 508 aaKnown RBP11.74□□□□□ -0.53
HMGCR-201ENST00000287936 IL25Q9H293 177 aa11.74□□□□□ -0.53
HMGCR-201ENST00000287936 ALDH8A1Q9H2A2 487 aaPredicted RBP11.74□□□□□ -0.53
HMGCR-201ENST00000287936 CLSTN2Q9H4D0 955 aa11.74□□□□□ -0.53
HMGCR-201ENST00000287936 A0A1B0GUL7 405 aa11.74□□□□□ -0.53
HMGCR-201ENST00000287936 NEMFO60524 1076 aa11.74□□□□□ -0.53
HMGCR-201ENST00000287936 NAA16Q6N069 864 aaPredicted RBP11.74□□□□□ -0.53
HMGCR-201ENST00000287936 NACAP1Q9BZK3 213 aa11.74□□□□□ -0.53
HMGCR-201ENST00000287936 SNRKQ9NRH2 765 aa11.74□□□□□ -0.53
HMGCR-201ENST00000287936 TMEM94Q12767 1356 aa11.74□□□□□ -0.53
HMGCR-201ENST00000287936 IDH1O75874 414 aaKnown RBP11.74□□□□□ -0.53
HMGCR-201ENST00000287936 OLFM4Q6UX06 510 aa11.74□□□□□ -0.53
HMGCR-201ENST00000287936 FBXW7Q969H0 707 aa11.74□□□□□ -0.53
HMGCR-201ENST00000287936 APOBRQ0VD83 1088 aa11.74□□□□□ -0.53
HMGCR-201ENST00000287936 LDHAL6AQ6ZMR3 332 aa11.74□□□□□ -0.53
HMGCR-201ENST00000287936 TIMM10P62072 90 aa11.73□□□□□ -0.53
HMGCR-201ENST00000287936 ATP2B3Q16720 1220 aa11.73□□□□□ -0.53
HMGCR-201ENST00000287936 TTC12Q9H892 705 aaPredicted RBP11.73□□□□□ -0.53
HMGCR-201ENST00000287936 C1orf167Q5SNV9 1468 aa11.73□□□□□ -0.53
HMGCR-201ENST00000287936 GUCY1B3Q02153 619 aa11.73□□□□□ -0.53
HMGCR-201ENST00000287936 ZNF589Q86UQ0 364 aaPredicted RBP11.73□□□□□ -0.53
HMGCR-201ENST00000287936 VSIG10Q8N0Z9 540 aa11.73□□□□□ -0.53
HMGCR-201ENST00000287936 PIBF1Q8WXW3 757 aa11.73□□□□□ -0.53
HMGCR-201ENST00000287936 ZNF592Q92610 1267 aa11.73□□□□□ -0.53
HMGCR-201ENST00000287936 AIDAQ96BJ3 306 aa11.73□□□□□ -0.53
HMGCR-201ENST00000287936 ORC3Q9UBD5 711 aaPredicted RBP11.73□□□□□ -0.53
HMGCR-201ENST00000287936 CLIP2Q9UDT6 1046 aa11.73□□□□□ -0.53
HMGCR-201ENST00000287936 FAM208AQ9UK61 1670 aaKnown RBP11.73□□□□□ -0.53
HMGCR-201ENST00000287936 XRN1Q8IZH2 1706 aaKnown RBP11.73□□□□□ -0.53
HMGCR-201ENST00000287936 NPHP1O15259 732 aa11.73□□□□□ -0.53
HMGCR-201ENST00000287936 TTC6Q86TZ1 520 aa11.73□□□□□ -0.53
HMGCR-201ENST00000287936 WASF1Q92558 559 aa11.73□□□□□ -0.53
HMGCR-201ENST00000287936 ZNF830Q96NB3 372 aaPredicted RBP11.73□□□□□ -0.53
HMGCR-201ENST00000287936 FBXO3Q9UK99 471 aa11.73□□□□□ -0.53
HMGCR-201ENST00000287936 SH3TC1Q8TE82 1336 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 UQCRFS1P1P0C7P4 283 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 KCNB2Q92953 911 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 MPHOSPH8Q99549 860 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 CCDC69A6NI79 296 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 SMTNL1A8MU46 457 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 PFKFB2O60825 505 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 FAM173BQ6P4H8 233 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 TRIM22Q8IYM9 498 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 TRMT112Q9UI30 125 aaKnown RBP11.72□□□□□ -0.53
HMGCR-201ENST00000287936 KLF18A0A0U1RQI7 1052 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 GTF2E1P29083 439 aaPredicted RBP11.72□□□□□ -0.53
HMGCR-201ENST00000287936 EPHA10Q5JZY3 1008 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 KCNG4Q8TDN1 519 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 HEG1Q9ULI3 1381 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 CIAO1O76071 339 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 SMC2O95347 1197 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 A1BGP04217 495 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 XBP1P17861 261 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 HAND2P61296 217 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 TSGA10IPQ3SY00 556 aa11.72□□□□□ -0.53
HMGCR-201ENST00000287936 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.72□□□□□ -0.53
HMGCR-201ENST00000287936 DDX17Q92841 729 aaKnown RBP11.72□□□□□ -0.53
HMGCR-201ENST00000287936 MRPS27Q92552 414 aaKnown RBP11.71□□□□□ -0.53
HMGCR-201ENST00000287936 JAK2O60674 1132 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms