RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 BRF1Q92994 677 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 DDX27Q96GQ7 796 aaKnown RBP10.32□□□□□ -0.76
SMC2-201ENST00000286398 PPP1R9BQ96SB3 815 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 ZNF692Q9BU19 519 aaPredicted RBP10.32□□□□□ -0.76
SMC2-201ENST00000286398 SLC26A6Q9BXS9 759 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 LRRC27Q9C0I9 530 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 IFNKQ9P0W0 207 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 FMNL3Q8IVF7 1028 aa10.32□□□□□ -0.76
SMC2-201ENST00000286398 HPDP32754 393 aaPredicted RBP10.31□□□□□ -0.76
SMC2-201ENST00000286398 TNNC1P63316 161 aa10.31□□□□□ -0.76
SMC2-201ENST00000286398 TSNAXIP1Q2TAA8 658 aa10.31□□□□□ -0.76
SMC2-201ENST00000286398 CCDC25Q86WR0 208 aa10.31□□□□□ -0.76
SMC2-201ENST00000286398 CCDC50Q8IVM0 306 aa10.31□□□□□ -0.76
SMC2-201ENST00000286398 RIOK3O14730 519 aaKnown RBP10.31□□□□□ -0.76
SMC2-201ENST00000286398 F13A1P00488 732 aa10.31□□□□□ -0.76
SMC2-201ENST00000286398 TAF7Q15545 349 aaPredicted RBP10.31□□□□□ -0.76
SMC2-201ENST00000286398 PNMA8AQ86V59 439 aaPredicted RBP10.31□□□□□ -0.76
SMC2-201ENST00000286398 PABPN1LA6NDY0 278 aaKnown RBP10.31□□□□□ -0.76
SMC2-201ENST00000286398 CIB2O75838 187 aa10.31□□□□□ -0.76
SMC2-201ENST00000286398 NKIRAS1Q9NYS0 192 aa10.31□□□□□ -0.76
SMC2-201ENST00000286398 MKRN1Q9UHC7 482 aaKnown RBP10.31□□□□□ -0.76
SMC2-201ENST00000286398 RUSC2Q8N2Y8 1516 aa10.31□□□□□ -0.76
SMC2-201ENST00000286398 CCDC38Q502W7 563 aa10.31□□□□□ -0.76
SMC2-201ENST00000286398 SNX21Q969T3 373 aa10.31□□□□□ -0.76
SMC2-201ENST00000286398 UTP14AQ9BVJ6 771 aaKnown RBP10.31□□□□□ -0.76
SMC2-201ENST00000286398 TSPYL2Q9H2G4 693 aaPredicted RBP10.31□□□□□ -0.76
SMC2-201ENST00000286398 RPGRIP1LQ68CZ1 1315 aa10.31□□□□□ -0.76
SMC2-201ENST00000286398 NBPF7P0C2Y1 421 aaPredicted RBP10.3□□□□□ -0.76
SMC2-201ENST00000286398 GSTA5Q7RTV2 222 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 A6NNZ2 444 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 ARHGAP25P42331 645 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 RRS1Q15050 365 aaKnown RBP10.3□□□□□ -0.76
SMC2-201ENST00000286398 TUBB8Q3ZCM7 444 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 RGS22Q8NE09 1264 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 CUL5Q93034 780 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 NPHP3Q7Z494 1330 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 ERBINQ96RT1 1412 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 GIGYF1O75420 1035 aaPredicted RBP10.3□□□□□ -0.76
SMC2-201ENST00000286398 BMP15O95972 392 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 HAND2P61296 217 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 PLCB3Q01970 1234 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 ARID5AQ03989 594 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 TTF1Q15361 905 aaPredicted RBP10.3□□□□□ -0.76
SMC2-201ENST00000286398 MYRIPQ8NFW9 859 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 CDK19Q9BWU1 502 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 ABCC11Q96J66 1382 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 NDC80O14777 642 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 RAB3GAP1Q15042 981 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 WHAMMP3Q1A5X7 153 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 MICAL1Q8TDZ2 1067 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 UBLCP1Q8WVY7 318 aaPredicted RBP10.3□□□□□ -0.76
SMC2-201ENST00000286398 CEP85LQ5SZL2 805 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 VCXQ9H320 206 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 SSX2IPQ9Y2D8 614 aa10.3□□□□□ -0.76
SMC2-201ENST00000286398 GOLGA6CA6NDK9 693 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 GOLGA6DP0CG33 693 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 MCM10Q7L590 875 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 CABS1Q96KC9 395 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 RABEP2Q9H5N1 569 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 GOLGA6AQ9NYA3 693 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 MARCKSP29966 332 aaPredicted RBP10.29□□□□□ -0.76
SMC2-201ENST00000286398 STAT6P42226 847 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 TSHZ3Q63HK5 1081 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 TRMT1LQ7Z2T5 733 aaKnown RBP10.29□□□□□ -0.76
SMC2-201ENST00000286398 CRACR2BQ8N4Y2 399 aaPredicted RBP10.29□□□□□ -0.76
SMC2-201ENST00000286398 MROH2BQ7Z745 1585 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 TBCAO75347 108 aaKnown RBP10.29□□□□□ -0.76
SMC2-201ENST00000286398 PEX19P40855 299 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 CALCOCO2Q13137 446 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.29□□□□□ -0.76
SMC2-201ENST00000286398 NCOA7Q8NI08 942 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 TCEANC2Q96MN5 208 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 GNAT3A8MTJ3 354 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 WDHD1O75717 1129 aaPredicted RBP10.29□□□□□ -0.76
SMC2-201ENST00000286398 GBP1P32455 592 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 ESCO1Q5FWF5 840 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 PDS5BQ9NTI5 1447 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 KLF18A0A0U1RQI7 1052 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 ELF2Q15723 593 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 CAVIN4Q5BKX8 364 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 PTPRGP23470 1445 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 NACADO15069 1562 aa10.29□□□□□ -0.76
SMC2-201ENST00000286398 RTL1A6NKG5 1358 aa10.28□□□□□ -0.76
SMC2-201ENST00000286398 LRRC45Q96CN5 670 aa10.28□□□□□ -0.76
SMC2-201ENST00000286398 ALG1Q9BT22 464 aa10.28□□□□□ -0.76
SMC2-201ENST00000286398 TMOD2Q9NZR1 351 aa10.28□□□□□ -0.76
SMC2-201ENST00000286398 PLEKHH2Q8IVE3 1493 aa10.28□□□□□ -0.76
SMC2-201ENST00000286398 SDSP20132 328 aa10.28□□□□□ -0.76
SMC2-201ENST00000286398 TERF1P54274 439 aa10.28□□□□□ -0.76
SMC2-201ENST00000286398 CCDC170Q8IYT3 715 aa10.28□□□□□ -0.76
SMC2-201ENST00000286398 SMC1BQ8NDV3 1235 aa10.28□□□□□ -0.76
SMC2-201ENST00000286398 CARD6Q9BX69 1037 aa10.28□□□□□ -0.76
SMC2-201ENST00000286398 ATP6V1AP38606 617 aa10.28□□□□□ -0.76
SMC2-201ENST00000286398 ZC3H6P61129 1189 aaKnown RBP10.28□□□□□ -0.76
SMC2-201ENST00000286398 CCDC122Q5T0U0 273 aa10.28□□□□□ -0.76
SMC2-201ENST00000286398 GJC1P36383 396 aa10.28□□□□□ -0.76
SMC2-201ENST00000286398 CFAP157Q5JU67 520 aa10.28□□□□□ -0.76
SMC2-201ENST00000286398 VSIG1Q86XK7 387 aa10.28□□□□□ -0.76
SMC2-201ENST00000286398 BAG1Q99933 345 aaPredicted RBP10.28□□□□□ -0.76
SMC2-201ENST00000286398 TPX2Q9ULW0 747 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms