RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 CICQ96RK0 1608 aaPredicted RBP9.06□□□□□ -0.96
TRIM42-201ENST00000286349 RPS6KA4O75676 772 aa9.06□□□□□ -0.96
TRIM42-201ENST00000286349 TSHZ1Q6ZSZ6 1077 aa9.06□□□□□ -0.96
TRIM42-201ENST00000286349 NUTM1Q86Y26 1132 aa9.06□□□□□ -0.96
TRIM42-201ENST00000286349 RUFY2Q8WXA3 655 aa9.06□□□□□ -0.96
TRIM42-201ENST00000286349 ECHDC1Q9NTX5 307 aa9.06□□□□□ -0.96
TRIM42-201ENST00000286349 MYH14Q7Z406 1995 aaKnown RBP9.06□□□□□ -0.96
TRIM42-201ENST00000286349 HIP1O00291 1037 aa9.05□□□□□ -0.96
TRIM42-201ENST00000286349 GNPATO15228 680 aa9.05□□□□□ -0.96
TRIM42-201ENST00000286349 SATB1Q01826 763 aa9.05□□□□□ -0.96
TRIM42-201ENST00000286349 MAP2K1Q02750 393 aaPredicted RBP9.05□□□□□ -0.96
TRIM42-201ENST00000286349 SPRYD3Q8NCJ5 442 aa9.05□□□□□ -0.96
TRIM42-201ENST00000286349 GBP4Q96PP9 640 aa9.05□□□□□ -0.96
TRIM42-201ENST00000286349 KDM4AO75164 1064 aa9.05□□□□□ -0.96
TRIM42-201ENST00000286349 IL6STP40189 918 aaPredicted RBP9.05□□□□□ -0.96
TRIM42-201ENST00000286349 BANK1Q8NDB2 785 aa9.05□□□□□ -0.96
TRIM42-201ENST00000286349 ARHGEF1Q92888 912 aaKnown RBP9.05□□□□□ -0.96
TRIM42-201ENST00000286349 COL5A3P25940 1745 aaPredicted RBP9.05□□□□□ -0.96
TRIM42-201ENST00000286349 ARFGEF2Q9Y6D5 1785 aa9.05□□□□□ -0.96
TRIM42-201ENST00000286349 ZNF500O60304 480 aaPredicted RBP9.04□□□□□ -0.96
TRIM42-201ENST00000286349 MCM4P33991 863 aa9.04□□□□□ -0.96
TRIM42-201ENST00000286349 RAB3GAP1Q15042 981 aa9.04□□□□□ -0.96
TRIM42-201ENST00000286349 RABL6Q3YEC7 729 aaPredicted RBP9.04□□□□□ -0.96
TRIM42-201ENST00000286349 TSHZ3Q63HK5 1081 aa9.04□□□□□ -0.96
TRIM42-201ENST00000286349 PDGFDQ9GZP0 370 aaPredicted RBP9.04□□□□□ -0.96
TRIM42-201ENST00000286349 BSDC1Q9NW68 430 aaPredicted RBP9.04□□□□□ -0.96
TRIM42-201ENST00000286349 C4BP0C0L5 1744 aa9.04□□□□□ -0.96
TRIM42-201ENST00000286349 RGPD3A6NKT7 1758 aaPredicted RBP9.04□□□□□ -0.96
TRIM42-201ENST00000286349 RGPD4Q7Z3J3 1758 aa9.04□□□□□ -0.96
TRIM42-201ENST00000286349 NUCB2P80303 420 aa9.04□□□□□ -0.96
TRIM42-201ENST00000286349 SLC15A2Q16348 729 aa9.04□□□□□ -0.96
TRIM42-201ENST00000286349 COL23A1Q86Y22 540 aaPredicted RBP9.04□□□□□ -0.96
TRIM42-201ENST00000286349 EVI5LQ96CN4 794 aa9.04□□□□□ -0.96
TRIM42-201ENST00000286349 KAZALD1Q96I82 304 aa9.04□□□□□ -0.96
TRIM42-201ENST00000286349 ANO2Q9NQ90 1003 aa9.04□□□□□ -0.96
TRIM42-201ENST00000286349 COPRSQ9NQ92 184 aa9.04□□□□□ -0.96
TRIM42-201ENST00000286349 TBC1D2BQ9UPU7 963 aa9.04□□□□□ -0.96
TRIM42-201ENST00000286349 RREB1Q92766 1687 aa9.04□□□□□ -0.96
TRIM42-201ENST00000286349 TAF1LQ8IZX4 1826 aa9.03□□□□□ -0.96
TRIM42-201ENST00000286349 HLFQ16534 295 aa9.03□□□□□ -0.96
TRIM42-201ENST00000286349 CCDC96Q2M329 555 aa9.03□□□□□ -0.96
TRIM42-201ENST00000286349 KIAA1211Q6ZU35 1233 aa9.03□□□□□ -0.96
TRIM42-201ENST00000286349 AK7Q96M32 723 aa9.03□□□□□ -0.96
TRIM42-201ENST00000286349 BCL2L12Q9HB09 334 aa9.03□□□□□ -0.96
TRIM42-201ENST00000286349 SRP68Q9UHB9 627 aaKnown RBP9.03□□□□□ -0.96
TRIM42-201ENST00000286349 RTCBQ9Y3I0 505 aaKnown RBP9.03□□□□□ -0.96
TRIM42-201ENST00000286349 ZNF330Q9Y3S2 320 aaPredicted RBP9.03□□□□□ -0.96
TRIM42-201ENST00000286349 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.03□□□□□ -0.96
TRIM42-201ENST00000286349 SGSM2O43147 1006 aa9.03□□□□□ -0.96
TRIM42-201ENST00000286349 CAMTA2O94983 1202 aa9.03□□□□□ -0.96
TRIM42-201ENST00000286349 SSR1P43307 286 aaKnown RBP9.03□□□□□ -0.96
TRIM42-201ENST00000286349 RINLQ6ZS11 566 aa9.03□□□□□ -0.96
TRIM42-201ENST00000286349 AACSQ86V21 672 aa9.03□□□□□ -0.96
TRIM42-201ENST00000286349 NBPF5PQ86XG9 351 aaPredicted RBP9.03□□□□□ -0.96
TRIM42-201ENST00000286349 PNPLA7Q6ZV29 1317 aa9.03□□□□□ -0.96
TRIM42-201ENST00000286349 AK9Q5TCS8 1911 aa9.03□□□□□ -0.96
TRIM42-201ENST00000286349 AFDNP55196 1824 aaKnown RBP9.02□□□□□ -0.96
TRIM42-201ENST00000286349 A0A087WZG4 1122 aa9.02□□□□□ -0.96
TRIM42-201ENST00000286349 CD2BP2O95400 341 aaKnown RBP9.02□□□□□ -0.96
TRIM42-201ENST00000286349 CCDC191Q8NCU4 936 aa9.02□□□□□ -0.96
TRIM42-201ENST00000286349 DIAPH3Q9NSV4 1193 aa9.02□□□□□ -0.96
TRIM42-201ENST00000286349 CWC25Q9NXE8 425 aaPredicted RBP9.02□□□□□ -0.96
TRIM42-201ENST00000286349 TFCP2L1Q9NZI6 479 aa9.02□□□□□ -0.96
TRIM42-201ENST00000286349 GOLGA6L22H0YM25 854 aa9.02□□□□□ -0.97
TRIM42-201ENST00000286349 SSFA2P28290 1259 aa9.02□□□□□ -0.97
TRIM42-201ENST00000286349 HSPA4P34932 840 aa9.02□□□□□ -0.97
TRIM42-201ENST00000286349 SKOR2Q2VWA4 1001 aaPredicted RBP9.02□□□□□ -0.97
TRIM42-201ENST00000286349 TRAPPC3LQ5T215 181 aa9.02□□□□□ -0.97
TRIM42-201ENST00000286349 CLEC17AQ6ZS10 378 aa9.02□□□□□ -0.97
TRIM42-201ENST00000286349 PA2G4Q9UQ80 394 aaKnown RBP9.02□□□□□ -0.97
TRIM42-201ENST00000286349 RAD50Q92878 1312 aa9.02□□□□□ -0.97
TRIM42-201ENST00000286349 NUP188Q5SRE5 1749 aa9.02□□□□□ -0.97
TRIM42-201ENST00000286349 H7C1W4 665 aa9.01□□□□□ -0.97
TRIM42-201ENST00000286349 GOLIM4O00461 696 aa9.01□□□□□ -0.97
TRIM42-201ENST00000286349 SOCS7O14512 581 aa9.01□□□□□ -0.97
TRIM42-201ENST00000286349 SASH1O94885 1247 aa9.01□□□□□ -0.97
TRIM42-201ENST00000286349 ARID4AP29374 1257 aaPredicted RBP9.01□□□□□ -0.97
TRIM42-201ENST00000286349 DZIP3Q86Y13 1208 aaKnown RBP9.01□□□□□ -0.97
TRIM42-201ENST00000286349 ZBTB3Q9H5J0 574 aa9.01□□□□□ -0.97
TRIM42-201ENST00000286349 ZKSCAN8Q15776 578 aaPredicted RBP9.01□□□□□ -0.97
TRIM42-201ENST00000286349 UBE3BQ7Z3V4 1068 aa9.01□□□□□ -0.97
TRIM42-201ENST00000286349 SGSM3Q96HU1 749 aa9.01□□□□□ -0.97
TRIM42-201ENST00000286349 TSPYL1Q9H0U9 437 aa9.01□□□□□ -0.97
TRIM42-201ENST00000286349 STK32BQ9NY57 414 aa9.01□□□□□ -0.97
TRIM42-201ENST00000286349 RFX7Q2KHR2 1363 aa9□□□□□ -0.97
TRIM42-201ENST00000286349 MAP3K15Q6ZN16 1313 aa9□□□□□ -0.97
TRIM42-201ENST00000286349 NEK4P51957 841 aa9□□□□□ -0.97
TRIM42-201ENST00000286349 CASP7P55210 303 aa9□□□□□ -0.97
TRIM42-201ENST00000286349 IRX5P78411 483 aaPredicted RBP9□□□□□ -0.97
TRIM42-201ENST00000286349 USPL1Q5W0Q7 1092 aa9□□□□□ -0.97
TRIM42-201ENST00000286349 MPNDQ8N594 471 aa9□□□□□ -0.97
TRIM42-201ENST00000286349 TNPO1Q92973 898 aaKnown RBP9□□□□□ -0.97
TRIM42-201ENST00000286349 INTS4Q96HW7 963 aaKnown RBP9□□□□□ -0.97
TRIM42-201ENST00000286349 NARFQ9UHQ1 456 aa9□□□□□ -0.97
TRIM42-201ENST00000286349 ERVV-1B6SEH8 477 aa9□□□□□ -0.97
TRIM42-201ENST00000286349 ADRA2BP18089 450 aa9□□□□□ -0.97
TRIM42-201ENST00000286349 RFX5P48382 616 aaPredicted RBP9□□□□□ -0.97
TRIM42-201ENST00000286349 EAF2Q96CJ1 260 aaPredicted RBP9□□□□□ -0.97
TRIM42-201ENST00000286349 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9□□□□□ -0.97
TRIM42-201ENST00000286349 NRDCO43847 1150 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms