RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 RBM6P78332 1123 aaKnown RBP13.31□□□□□ -0.28
GGPS1-201ENST00000282841 TRAPPC3LQ5T215 181 aa13.31□□□□□ -0.28
GGPS1-201ENST00000282841 SETDB2Q96T68 719 aa13.31□□□□□ -0.28
GGPS1-201ENST00000282841 RGS17Q9UGC6 210 aaPredicted RBP13.31□□□□□ -0.28
GGPS1-201ENST00000282841 NARFQ9UHQ1 456 aa13.31□□□□□ -0.28
GGPS1-201ENST00000282841 COL4A1P02462 1669 aa13.31□□□□□ -0.28
GGPS1-201ENST00000282841 SGSM2O43147 1006 aa13.31□□□□□ -0.28
GGPS1-201ENST00000282841 CPA1P15085 419 aa13.31□□□□□ -0.28
GGPS1-201ENST00000282841 POTEAQ6S8J7 498 aa13.31□□□□□ -0.28
GGPS1-201ENST00000282841 NBPF5PQ86XG9 351 aaPredicted RBP13.31□□□□□ -0.28
GGPS1-201ENST00000282841 EVI5LQ96CN4 794 aa13.31□□□□□ -0.28
GGPS1-201ENST00000282841 SBF2Q86WG5 1849 aa13.31□□□□□ -0.28
GGPS1-201ENST00000282841 AK9Q5TCS8 1911 aa13.31□□□□□ -0.28
GGPS1-201ENST00000282841 COL5A3P25940 1745 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-201ENST00000282841 APBA3O96018 575 aa13.3□□□□□ -0.28
GGPS1-201ENST00000282841 COL9A3Q14050 684 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-201ENST00000282841 ZNF589Q86UQ0 364 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-201ENST00000282841 IQSEC3Q9UPP2 1182 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-201ENST00000282841 ABCC12Q96J65 1359 aa13.3□□□□□ -0.28
GGPS1-201ENST00000282841 ATP5JP18859 108 aa13.3□□□□□ -0.28
GGPS1-201ENST00000282841 MPHOSPH8Q99549 860 aa13.3□□□□□ -0.28
GGPS1-201ENST00000282841 RXRBP28702 533 aa13.3□□□□□ -0.28
GGPS1-201ENST00000282841 ATP2B3Q16720 1220 aa13.3□□□□□ -0.28
GGPS1-201ENST00000282841 PARP10Q53GL7 1025 aa13.3□□□□□ -0.28
GGPS1-201ENST00000282841 HSCBQ8IWL3 235 aa13.3□□□□□ -0.28
GGPS1-201ENST00000282841 NHSQ6T4R5 1651 aa13.29□□□□□ -0.28
GGPS1-201ENST00000282841 ANKRD36CQ5JPF3 1778 aa13.29□□□□□ -0.28
GGPS1-201ENST00000282841 IFIT1P09914 478 aaKnown RBP13.29□□□□□ -0.28
GGPS1-201ENST00000282841 TXNRD1Q16881 649 aa13.29□□□□□ -0.28
GGPS1-201ENST00000282841 ZNF772Q68DY9 489 aaPredicted RBP13.29□□□□□ -0.28
GGPS1-201ENST00000282841 RASEFQ8IZ41 740 aa13.29□□□□□ -0.28
GGPS1-201ENST00000282841 CIAO1O76071 339 aa13.29□□□□□ -0.28
GGPS1-201ENST00000282841 TAF6LQ9Y6J9 622 aa13.29□□□□□ -0.28
GGPS1-201ENST00000282841 RIC1Q4ADV7 1423 aa13.28□□□□□ -0.28
GGPS1-201ENST00000282841 TTC39AQ5SRH9 613 aa13.28□□□□□ -0.28
GGPS1-201ENST00000282841 RC3H1Q5TC82 1133 aaKnown RBP13.28□□□□□ -0.28
GGPS1-201ENST00000282841 CELF1Q92879 486 aaKnown RBP13.28□□□□□ -0.28
GGPS1-201ENST00000282841 LSG1Q9H089 658 aaKnown RBP13.28□□□□□ -0.28
GGPS1-201ENST00000282841 NEK4P51957 841 aa13.28□□□□□ -0.28
GGPS1-201ENST00000282841 NFIXQ14938 502 aa13.28□□□□□ -0.28
GGPS1-201ENST00000282841 CLEC4GQ6UXB4 293 aa13.28□□□□□ -0.28
GGPS1-201ENST00000282841 KIAA1211Q6ZU35 1233 aa13.28□□□□□ -0.28
GGPS1-201ENST00000282841 ZAP70P43403 619 aa13.27□□□□□ -0.28
GGPS1-201ENST00000282841 PHKA1P46020 1223 aa13.27□□□□□ -0.28
GGPS1-201ENST00000282841 CCDC152Q4G0S7 254 aa13.27□□□□□ -0.28
GGPS1-201ENST00000282841 HAUS7Q99871 368 aa13.27□□□□□ -0.28
GGPS1-201ENST00000282841 PAG1Q9NWQ8 432 aa13.27□□□□□ -0.28
GGPS1-201ENST00000282841 ZNF609O15014 1411 aa13.27□□□□□ -0.28
GGPS1-201ENST00000282841 PDE8BO95263 885 aa13.27□□□□□ -0.29
GGPS1-201ENST00000282841 PRPF40BQ6NWY9 871 aaKnown RBP13.27□□□□□ -0.29
GGPS1-201ENST00000282841 KCNJ4P48050 445 aa13.26□□□□□ -0.29
GGPS1-201ENST00000282841 ZNF827Q17R98 1081 aa13.26□□□□□ -0.29
GGPS1-201ENST00000282841 VGLL2Q8N8G2 317 aa13.26□□□□□ -0.29
GGPS1-201ENST00000282841 HSP90AA1P07900 732 aaKnown RBP13.26□□□□□ -0.29
GGPS1-201ENST00000282841 TFCP2L1Q9NZI6 479 aa13.26□□□□□ -0.29
GGPS1-201ENST00000282841 CCDC158Q5M9N0 1113 aa13.26□□□□□ -0.29
GGPS1-201ENST00000282841 MYH3P11055 1940 aa13.25□□□□□ -0.29
GGPS1-201ENST00000282841 A0A0G2JLW4 131 aa13.25□□□□□ -0.29
GGPS1-201ENST00000282841 IGHMBP2P38935 993 aaKnown RBP13.25□□□□□ -0.29
GGPS1-201ENST00000282841 MCAMP43121 646 aa13.25□□□□□ -0.29
GGPS1-201ENST00000282841 BCAMP50895 628 aa13.25□□□□□ -0.29
GGPS1-201ENST00000282841 VPS53Q5VIR6 699 aa13.25□□□□□ -0.29
GGPS1-201ENST00000282841 MSL1Q68DK7 614 aa13.25□□□□□ -0.29
GGPS1-201ENST00000282841 TCEANC2Q96MN5 208 aa13.25□□□□□ -0.29
GGPS1-201ENST00000282841 CHRNDQ07001 517 aa13.25□□□□□ -0.29
GGPS1-201ENST00000282841 ADCK5Q3MIX3 580 aa13.25□□□□□ -0.29
GGPS1-201ENST00000282841 AKAP2Q9Y2D5 859 aa13.25□□□□□ -0.29
GGPS1-201ENST00000282841 RREB1Q92766 1687 aa13.24□□□□□ -0.29
GGPS1-201ENST00000282841 C4BP0C0L5 1744 aa13.24□□□□□ -0.29
GGPS1-201ENST00000282841 GYS1P13807 737 aa13.24□□□□□ -0.29
GGPS1-201ENST00000282841 KLRK1P26718 216 aa13.24□□□□□ -0.29
GGPS1-201ENST00000282841 CCDC102BQ68D86 513 aa13.24□□□□□ -0.29
GGPS1-201ENST00000282841 TPTE2Q6XPS3 522 aa13.24□□□□□ -0.29
GGPS1-201ENST00000282841 JAG2Q9Y219 1238 aa13.24□□□□□ -0.29
GGPS1-201ENST00000282841 SNX14Q9Y5W7 946 aa13.24□□□□□ -0.29
GGPS1-201ENST00000282841 TAF1LQ8IZX4 1826 aa13.24□□□□□ -0.29
GGPS1-201ENST00000282841 RABEP1Q15276 862 aa13.23□□□□□ -0.29
GGPS1-201ENST00000282841 GPR108Q9NPR9 543 aa13.23□□□□□ -0.29
GGPS1-201ENST00000282841 RBM8AQ9Y5S9 174 aaKnown RBP13.23□□□□□ -0.29
GGPS1-201ENST00000282841 RAD50Q92878 1312 aa13.23□□□□□ -0.29
GGPS1-201ENST00000282841 SPEF2Q9C093 1822 aa13.23□□□□□ -0.29
GGPS1-201ENST00000282841 DDX60Q8IY21 1712 aaKnown RBP13.23□□□□□ -0.29
GGPS1-201ENST00000282841 HSPA4P34932 840 aa13.23□□□□□ -0.29
GGPS1-201ENST00000282841 GYG1P46976 350 aa13.23□□□□□ -0.29
GGPS1-201ENST00000282841 KBTBD3Q8NAB2 608 aa13.23□□□□□ -0.29
GGPS1-201ENST00000282841 RUFY2Q8WXA3 655 aa13.23□□□□□ -0.29
GGPS1-201ENST00000282841 NLRP3Q96P20 1036 aa13.23□□□□□ -0.29
GGPS1-201ENST00000282841 K7ELQ4 463 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-201ENST00000282841 WASHC4Q2M389 1173 aa13.22□□□□□ -0.29
GGPS1-201ENST00000282841 ANKRD18AQ8IVF6 992 aa13.22□□□□□ -0.29
GGPS1-201ENST00000282841 GPR101Q96P66 508 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-201ENST00000282841 LY75O60449 1722 aa13.22□□□□□ -0.29
GGPS1-201ENST00000282841 CCDC171Q6TFL3 1326 aa13.22□□□□□ -0.29
GGPS1-201ENST00000282841 FRAT2O75474 233 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-201ENST00000282841 IDH1O75874 414 aaKnown RBP13.22□□□□□ -0.29
GGPS1-201ENST00000282841 MCCP23508 829 aa13.22□□□□□ -0.29
GGPS1-201ENST00000282841 CYP2E1P05181 493 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-201ENST00000282841 EN1Q05925 392 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-201ENST00000282841 PUM3Q15397 648 aaKnown RBP13.22□□□□□ -0.29
GGPS1-201ENST00000282841 ZGPATQ8N5A5 531 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms