RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 COL4A1P02462 1669 aa13.93□□□□□ -0.18
XRCC4-201ENST00000282268 TNRC6CQ9HCJ0 1690 aaKnown RBP13.93□□□□□ -0.18
XRCC4-201ENST00000282268 RTL9Q8NET4 1388 aa13.93□□□□□ -0.18
XRCC4-201ENST00000282268 A0A1B0GUL7 405 aa13.92□□□□□ -0.18
XRCC4-201ENST00000282268 SNAP23O00161 211 aa13.92□□□□□ -0.18
XRCC4-201ENST00000282268 ADORA1P30542 326 aa13.92□□□□□ -0.18
XRCC4-201ENST00000282268 GORABQ5T7V8 394 aa13.92□□□□□ -0.18
XRCC4-201ENST00000282268 PI4K2BQ8TCG2 481 aa13.92□□□□□ -0.18
XRCC4-201ENST00000282268 BOLA2Q9H3K6 86 aa13.92□□□□□ -0.18
XRCC4-201ENST00000282268 AKAP2Q9Y2D5 859 aa13.92□□□□□ -0.18
XRCC4-201ENST00000282268 RIC1Q4ADV7 1423 aa13.92□□□□□ -0.18
XRCC4-201ENST00000282268 MROH5Q6ZUA9 1318 aa13.92□□□□□ -0.18
XRCC4-201ENST00000282268 ERC2O15083 957 aa13.91□□□□□ -0.18
XRCC4-201ENST00000282268 ATP2B3Q16720 1220 aa13.91□□□□□ -0.18
XRCC4-201ENST00000282268 AOX1Q06278 1338 aa13.91□□□□□ -0.18
XRCC4-201ENST00000282268 TTC41PQ6P2S7 1318 aa13.91□□□□□ -0.18
XRCC4-201ENST00000282268 ZNF609O15014 1411 aa13.91□□□□□ -0.18
XRCC4-201ENST00000282268 RPS8P62241 208 aaKnown RBP13.91□□□□□ -0.18
XRCC4-201ENST00000282268 CHRNDQ07001 517 aa13.91□□□□□ -0.18
XRCC4-201ENST00000282268 R3HDM1Q15032 1099 aaKnown RBP13.91□□□□□ -0.18
XRCC4-201ENST00000282268 SLC51AQ86UW1 340 aa13.91□□□□□ -0.18
XRCC4-201ENST00000282268 RBM17Q96I25 401 aaKnown RBP13.91□□□□□ -0.18
XRCC4-201ENST00000282268 SPEF2Q9C093 1822 aa13.91□□□□□ -0.18
XRCC4-201ENST00000282268 GLRX3O76003 335 aaKnown RBP13.9□□□□□ -0.18
XRCC4-201ENST00000282268 PDE8BO95263 885 aa13.9□□□□□ -0.18
XRCC4-201ENST00000282268 ZBTB7AO95365 584 aa13.9□□□□□ -0.18
XRCC4-201ENST00000282268 SEC24BO95487 1268 aa13.9□□□□□ -0.18
XRCC4-201ENST00000282268 XAGE2Q96GT9 111 aa13.9□□□□□ -0.18
XRCC4-201ENST00000282268 GPR108Q9NPR9 543 aa13.9□□□□□ -0.18
XRCC4-201ENST00000282268 NDUFB9Q9Y6M9 179 aa13.9□□□□□ -0.18
XRCC4-201ENST00000282268 TAF1P21675 1872 aa13.9□□□□□ -0.18
XRCC4-201ENST00000282268 GRAPQ13588 217 aa13.89□□□□□ -0.19
XRCC4-201ENST00000282268 VGLL2Q8N8G2 317 aa13.89□□□□□ -0.19
XRCC4-201ENST00000282268 GRAPLQ8TC17 118 aaPredicted RBP13.89□□□□□ -0.19
XRCC4-201ENST00000282268 BSDC1Q9NW68 430 aaPredicted RBP13.89□□□□□ -0.19
XRCC4-201ENST00000282268 CASZ1Q86V15 1759 aa13.89□□□□□ -0.19
XRCC4-201ENST00000282268 PSDA5PKW4 1024 aaPredicted RBP13.88□□□□□ -0.19
XRCC4-201ENST00000282268 WTIPA6NIX2 430 aaPredicted RBP13.88□□□□□ -0.19
XRCC4-201ENST00000282268 CDC45O75419 566 aa13.88□□□□□ -0.19
XRCC4-201ENST00000282268 PUM3Q15397 648 aaKnown RBP13.88□□□□□ -0.19
XRCC4-201ENST00000282268 TTC39AQ5SRH9 613 aa13.88□□□□□ -0.19
XRCC4-201ENST00000282268 TBC1D9Q6ZT07 1266 aa13.88□□□□□ -0.19
XRCC4-201ENST00000282268 DNAJC2Q99543 621 aaKnown RBP13.88□□□□□ -0.19
XRCC4-201ENST00000282268 BRIP1Q9BX63 1249 aa13.88□□□□□ -0.19
XRCC4-201ENST00000282268 MINPP1Q9UNW1 487 aa13.88□□□□□ -0.19
XRCC4-201ENST00000282268 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
XRCC4-201ENST00000282268 SLC5A1P13866 664 aa13.88□□□□□ -0.19
XRCC4-201ENST00000282268 MFAP1P55081 439 aaKnown RBP13.88□□□□□ -0.19
XRCC4-201ENST00000282268 ZNF622Q969S3 477 aaKnown RBP eCLIP13.88□□□□□ -0.19
XRCC4-201ENST00000282268 EDC3Q96F86 508 aaKnown RBP13.88□□□□□ -0.19
XRCC4-201ENST00000282268 LRP5O75197 1615 aa13.87□□□□□ -0.19
XRCC4-201ENST00000282268 PDE6BP35913 854 aa13.87□□□□□ -0.19
XRCC4-201ENST00000282268 KCNJ4P48050 445 aa13.87□□□□□ -0.19
XRCC4-201ENST00000282268 CCDC158Q5M9N0 1113 aa13.87□□□□□ -0.19
XRCC4-201ENST00000282268 C2CD5Q86YS7 1000 aa13.87□□□□□ -0.19
XRCC4-201ENST00000282268 CNTROBQ8N137 903 aa13.87□□□□□ -0.19
XRCC4-201ENST00000282268 SNRKQ9NRH2 765 aa13.87□□□□□ -0.19
XRCC4-201ENST00000282268 RBM19Q9Y4C8 960 aaKnown RBP13.87□□□□□ -0.19
XRCC4-201ENST00000282268 IFIT1P09914 478 aaKnown RBP13.86□□□□□ -0.19
XRCC4-201ENST00000282268 ATP5JP18859 108 aa13.86□□□□□ -0.19
XRCC4-201ENST00000282268 CRY2Q49AN0 593 aa13.86□□□□□ -0.19
XRCC4-201ENST00000282268 LPIN2Q92539 896 aa13.86□□□□□ -0.19
XRCC4-201ENST00000282268 QSER1Q2KHR3 1735 aa13.86□□□□□ -0.19
XRCC4-201ENST00000282268 CHRNA5P30532 468 aa13.85□□□□□ -0.19
XRCC4-201ENST00000282268 CASC1Q6TDU7 716 aa13.85□□□□□ -0.19
XRCC4-201ENST00000282268 ILDR2Q71H61 639 aa13.85□□□□□ -0.19
XRCC4-201ENST00000282268 ANKIB1Q9P2G1 1089 aa13.85□□□□□ -0.19
XRCC4-201ENST00000282268 NPR1P16066 1061 aa13.85□□□□□ -0.19
XRCC4-201ENST00000282268 FGFR2P21802 821 aa13.85□□□□□ -0.19
XRCC4-201ENST00000282268 PHKA1P46020 1223 aa13.85□□□□□ -0.19
XRCC4-201ENST00000282268 FKBP4Q02790 459 aaKnown RBP eCLIP13.85□□□□□ -0.19
XRCC4-201ENST00000282268 FSD1Q9BTV5 496 aa13.85□□□□□ -0.19
XRCC4-201ENST00000282268 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
XRCC4-201ENST00000282268 GOLIM4O00461 696 aa13.84□□□□□ -0.19
XRCC4-201ENST00000282268 SRGNP10124 158 aa13.84□□□□□ -0.19
XRCC4-201ENST00000282268 BCAMP50895 628 aa13.84□□□□□ -0.19
XRCC4-201ENST00000282268 SLC16A10Q8TF71 515 aa13.84□□□□□ -0.19
XRCC4-201ENST00000282268 ANKRD2Q9GZV1 360 aa13.84□□□□□ -0.19
XRCC4-201ENST00000282268 KLRG2A4D1S0 409 aaPredicted RBP13.83□□□□□ -0.2
XRCC4-201ENST00000282268 H0YIN7 160 aa13.83□□□□□ -0.2
XRCC4-201ENST00000282268 PPEF1O14829 653 aaPredicted RBP13.83□□□□□ -0.2
XRCC4-201ENST00000282268 HOXA10P31260 410 aaPredicted RBP13.83□□□□□ -0.2
XRCC4-201ENST00000282268 GPSM2P81274 684 aa13.83□□□□□ -0.2
XRCC4-201ENST00000282268 SCARF1Q14162 830 aa13.83□□□□□ -0.2
XRCC4-201ENST00000282268 CCDC102BQ68D86 513 aa13.83□□□□□ -0.2
XRCC4-201ENST00000282268 PI16Q6UXB8 463 aa13.83□□□□□ -0.2
XRCC4-201ENST00000282268 EVI5LQ96CN4 794 aa13.83□□□□□ -0.2
XRCC4-201ENST00000282268 GPR101Q96P66 508 aaPredicted RBP13.83□□□□□ -0.2
XRCC4-201ENST00000282268 CRAMP1Q96RY5 1269 aa13.83□□□□□ -0.2
XRCC4-201ENST00000282268 HAUS7Q99871 368 aa13.83□□□□□ -0.2
XRCC4-201ENST00000282268 IQSEC3Q9UPP2 1182 aaPredicted RBP13.83□□□□□ -0.2
XRCC4-201ENST00000282268 NRXN2Q9P2S2 1712 aa13.83□□□□□ -0.2
XRCC4-201ENST00000282268 ANKRD31Q8N7Z5 1873 aa13.83□□□□□ -0.2
XRCC4-201ENST00000282268 BBOX1O75936 387 aa13.82□□□□□ -0.2
XRCC4-201ENST00000282268 CHMLP26374 656 aa13.82□□□□□ -0.2
XRCC4-201ENST00000282268 KLRK1P26718 216 aa13.82□□□□□ -0.2
XRCC4-201ENST00000282268 GYG1P46976 350 aa13.82□□□□□ -0.2
XRCC4-201ENST00000282268 KLHL34Q8N239 644 aa13.82□□□□□ -0.2
XRCC4-201ENST00000282268 MASTLQ96GX5 879 aa13.82□□□□□ -0.2
XRCC4-201ENST00000282268 PPP1R1BQ9UD71 204 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms