RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 TRIM22Q8IYM9 498 aa9.25□□□□□ -0.93
EPHA4-201ENST00000281821 CCDC85AQ96PX6 553 aaPredicted RBP9.25□□□□□ -0.93
EPHA4-201ENST00000281821 NAA16Q6N069 864 aaPredicted RBP9.25□□□□□ -0.93
EPHA4-201ENST00000281821 PXDNLA1KZ92 1463 aa9.25□□□□□ -0.93
EPHA4-201ENST00000281821 KCNQ3O43525 872 aa9.25□□□□□ -0.93
EPHA4-201ENST00000281821 KRT24Q2M2I5 525 aa9.25□□□□□ -0.93
EPHA4-201ENST00000281821 TTLL7Q6ZT98 887 aa9.25□□□□□ -0.93
EPHA4-201ENST00000281821 NOP58Q9Y2X3 529 aaKnown RBP9.25□□□□□ -0.93
EPHA4-201ENST00000281821 LTBP4Q8N2S1 1624 aa9.25□□□□□ -0.93
EPHA4-201ENST00000281821 MEGF6O75095 1541 aa9.25□□□□□ -0.93
EPHA4-201ENST00000281821 ATRNO75882 1429 aa9.25□□□□□ -0.93
EPHA4-201ENST00000281821 POLR3DP05423 398 aaPredicted RBP9.24□□□□□ -0.93
EPHA4-201ENST00000281821 G2E3Q7L622 706 aa9.24□□□□□ -0.93
EPHA4-201ENST00000281821 USP44Q9H0E7 712 aa9.24□□□□□ -0.93
EPHA4-201ENST00000281821 CYP46A1Q9Y6A2 500 aa9.24□□□□□ -0.93
EPHA4-201ENST00000281821 COL3A1P02461 1466 aaPredicted RBP9.24□□□□□ -0.93
EPHA4-201ENST00000281821 PDE4AP27815 886 aa9.24□□□□□ -0.93
EPHA4-201ENST00000281821 GPR162Q16538 588 aa9.24□□□□□ -0.93
EPHA4-201ENST00000281821 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.24□□□□□ -0.93
EPHA4-201ENST00000281821 NFAT5O94916 1531 aa9.24□□□□□ -0.93
EPHA4-201ENST00000281821 H7C1D1 291 aa9.24□□□□□ -0.93
EPHA4-201ENST00000281821 NUCB1Q02818 461 aa9.24□□□□□ -0.93
EPHA4-201ENST00000281821 CCAR1Q8IX12 1150 aaKnown RBP9.24□□□□□ -0.93
EPHA4-201ENST00000281821 VPS33BQ9H267 617 aa9.24□□□□□ -0.93
EPHA4-201ENST00000281821 BICC1Q9H694 974 aaKnown RBP9.24□□□□□ -0.93
EPHA4-201ENST00000281821 ABCC12Q96J65 1359 aa9.24□□□□□ -0.93
EPHA4-201ENST00000281821 SYAP1Q96A49 352 aaPredicted RBP9.24□□□□□ -0.93
EPHA4-201ENST00000281821 SF3B3Q15393 1217 aaKnown RBP9.23□□□□□ -0.93
EPHA4-201ENST00000281821 ARHGEF1Q92888 912 aaKnown RBP9.23□□□□□ -0.93
EPHA4-201ENST00000281821 BSDC1Q9NW68 430 aaPredicted RBP9.23□□□□□ -0.93
EPHA4-201ENST00000281821 USP42Q9H9J4 1324 aaKnown RBP9.23□□□□□ -0.93
EPHA4-201ENST00000281821 KIF20BQ96Q89 1820 aa9.23□□□□□ -0.93
EPHA4-201ENST00000281821 HCLS1P14317 486 aaPredicted RBP9.23□□□□□ -0.93
EPHA4-201ENST00000281821 GNAQP50148 359 aa9.23□□□□□ -0.93
EPHA4-201ENST00000281821 STYK1Q6J9G0 422 aa9.23□□□□□ -0.93
EPHA4-201ENST00000281821 BLOC1S2Q6QNY1 142 aa9.23□□□□□ -0.93
EPHA4-201ENST00000281821 SUGT1Q9Y2Z0 365 aa9.23□□□□□ -0.93
EPHA4-201ENST00000281821 PHLPP1O60346 1717 aa9.23□□□□□ -0.93
EPHA4-201ENST00000281821 ANAPC15P60006 121 aa9.23□□□□□ -0.93
EPHA4-201ENST00000281821 TGFB2P61812 414 aa9.23□□□□□ -0.93
EPHA4-201ENST00000281821 ZNF444Q8N0Y2 327 aaPredicted RBP9.23□□□□□ -0.93
EPHA4-201ENST00000281821 KRT23Q9C075 422 aa9.23□□□□□ -0.93
EPHA4-201ENST00000281821 CAMTA1Q9Y6Y1 1673 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 B4DLN1 442 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 PPEF1O14829 653 aaPredicted RBP9.22□□□□□ -0.93
EPHA4-201ENST00000281821 MRPL12P52815 198 aaKnown RBP9.22□□□□□ -0.93
EPHA4-201ENST00000281821 PODNQ7Z5L7 613 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.22□□□□□ -0.93
EPHA4-201ENST00000281821 MON2Q7Z3U7 1717 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 PPIP5K2O43314 1243 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 MPHOSPH6Q99547 160 aaKnown RBP9.22□□□□□ -0.93
EPHA4-201ENST00000281821 COA1Q9GZY4 146 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 HELLSQ9NRZ9 838 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 MARCH6O60337 910 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 PCP11498 1178 aaKnown RBP9.22□□□□□ -0.93
EPHA4-201ENST00000281821 EN1Q05925 392 aaPredicted RBP9.22□□□□□ -0.93
EPHA4-201ENST00000281821 ZNF34Q8IZ26 560 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 SUCLG2Q96I99 432 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 MKNK2Q9HBH9 465 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 RPAP1Q9BWH6 1393 aaPredicted RBP9.22□□□□□ -0.93
EPHA4-201ENST00000281821 PDE1AP54750 535 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 TNNI3KQ59H18 835 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 C22orf23Q9BZE7 217 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 FPGT-TNNI3KV9GXZ4 949 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 ROBO1Q9Y6N7 1651 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 PDE8BO95263 885 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 SLC10A5Q5PT55 438 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 SP8Q8IXZ3 490 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 BCS1LQ9Y276 419 aa9.22□□□□□ -0.93
EPHA4-201ENST00000281821 DCAF15Q66K64 600 aa9.21□□□□□ -0.93
EPHA4-201ENST00000281821 ATP5JP18859 108 aa9.21□□□□□ -0.93
EPHA4-201ENST00000281821 KIF5BP33176 963 aa9.21□□□□□ -0.93
EPHA4-201ENST00000281821 NUCB2P80303 420 aa9.21□□□□□ -0.93
EPHA4-201ENST00000281821 CCDC8Q9H0W5 538 aaPredicted RBP9.21□□□□□ -0.93
EPHA4-201ENST00000281821 TAOK3Q9H2K8 898 aa9.21□□□□□ -0.93
EPHA4-201ENST00000281821 BOLA2Q9H3K6 86 aa9.21□□□□□ -0.93
EPHA4-201ENST00000281821 CD2APQ9Y5K6 639 aa9.21□□□□□ -0.93
EPHA4-201ENST00000281821 H3BQV1 296 aa9.21□□□□□ -0.94
EPHA4-201ENST00000281821 RNF113AO15541 343 aaKnown RBP9.21□□□□□ -0.94
EPHA4-201ENST00000281821 IFFO2Q5TF58 517 aa9.21□□□□□ -0.94
EPHA4-201ENST00000281821 SPINK5Q9NQ38 1064 aaPredicted RBP9.21□□□□□ -0.94
EPHA4-201ENST00000281821 KCNQ2O43526 872 aa9.21□□□□□ -0.94
EPHA4-201ENST00000281821 CCDC12Q8WUD4 166 aaPredicted RBP9.21□□□□□ -0.94
EPHA4-201ENST00000281821 PAG1Q9NWQ8 432 aa9.21□□□□□ -0.94
EPHA4-201ENST00000281821 NALCNQ8IZF0 1738 aa9.21□□□□□ -0.94
EPHA4-201ENST00000281821 A0A1B0GUL7 405 aa9.21□□□□□ -0.94
EPHA4-201ENST00000281821 TTC22Q5TAA0 569 aa9.21□□□□□ -0.94
EPHA4-201ENST00000281821 PPP2R5BQ15173 497 aa9.2□□□□□ -0.94
EPHA4-201ENST00000281821 CCDC47Q96A33 483 aaKnown RBP9.2□□□□□ -0.94
EPHA4-201ENST00000281821 SH2B1Q9NRF2 756 aaPredicted RBP9.2□□□□□ -0.94
EPHA4-201ENST00000281821 ZNF804BA4D1E1 1349 aa9.2□□□□□ -0.94
EPHA4-201ENST00000281821 NUTM1Q86Y26 1132 aa9.2□□□□□ -0.94
EPHA4-201ENST00000281821 EHMT1Q9H9B1 1298 aa9.2□□□□□ -0.94
EPHA4-201ENST00000281821 ZNF213O14771 459 aa9.2□□□□□ -0.94
EPHA4-201ENST00000281821 CAMTA2O94983 1202 aa9.2□□□□□ -0.94
EPHA4-201ENST00000281821 ESR2Q92731 530 aa9.2□□□□□ -0.94
EPHA4-201ENST00000281821 CCDC69A6NI79 296 aa9.2□□□□□ -0.94
EPHA4-201ENST00000281821 CYP7A1P22680 504 aa9.2□□□□□ -0.94
EPHA4-201ENST00000281821 CTCFLQ8NI51 663 aaPredicted RBP9.2□□□□□ -0.94
EPHA4-201ENST00000281821 GOLIM4O00461 696 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms