RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 NOL8Q76FK4 1167 aaKnown RBP11.52□□□□□ -0.57
TRIM55-201ENST00000276573 JAKMIP1Q96N16 626 aaKnown RBP11.52□□□□□ -0.57
TRIM55-201ENST00000276573 SEC62Q99442 399 aaKnown RBP11.52□□□□□ -0.57
TRIM55-201ENST00000276573 FAM177BA6PVY3 158 aa11.51□□□□□ -0.57
TRIM55-201ENST00000276573 CHGBP05060 677 aa11.51□□□□□ -0.57
TRIM55-201ENST00000276573 AK2P54819 239 aa11.51□□□□□ -0.57
TRIM55-201ENST00000276573 ATP2B3Q16720 1220 aa11.51□□□□□ -0.57
TRIM55-201ENST00000276573 TSGA10IPQ3SY00 556 aa11.51□□□□□ -0.57
TRIM55-201ENST00000276573 RNF20Q5VTR2 975 aa11.51□□□□□ -0.57
TRIM55-201ENST00000276573 CLEC4GQ6UXB4 293 aa11.51□□□□□ -0.57
TRIM55-201ENST00000276573 GJD4Q96KN9 370 aaPredicted RBP11.51□□□□□ -0.57
TRIM55-201ENST00000276573 HELLSQ9NRZ9 838 aa11.51□□□□□ -0.57
TRIM55-201ENST00000276573 LIMCH1Q9UPQ0 1083 aa11.51□□□□□ -0.57
TRIM55-201ENST00000276573 NIP7Q9Y221 180 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRIM55-201ENST00000276573 CYP46A1Q9Y6A2 500 aa11.51□□□□□ -0.57
TRIM55-201ENST00000276573 ZNF831Q5JPB2 1677 aa11.51□□□□□ -0.57
TRIM55-201ENST00000276573 NTSR2O95665 410 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 CPA1P15085 419 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 KCNQ4P56696 695 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 MEX3CQ5U5Q3 659 aaKnown RBP11.5□□□□□ -0.57
TRIM55-201ENST00000276573 VPS53Q5VIR6 699 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 RUFY3Q7L099 469 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 VGLL2Q8N8G2 317 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 PDRG1Q9NUG6 133 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 ZNF652Q9Y2D9 606 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 CNTNAP4Q9C0A0 1308 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 MYH3P11055 1940 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 RNF113AO15541 343 aaKnown RBP11.5□□□□□ -0.57
TRIM55-201ENST00000276573 PDE8BO95263 885 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 HSP90B1P14625 803 aaKnown RBP11.5□□□□□ -0.57
TRIM55-201ENST00000276573 PSMA5P28066 241 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 HSPA1LP34931 641 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 ZMYM1Q5SVZ6 1142 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 RC3H1Q5TC82 1133 aaKnown RBP11.5□□□□□ -0.57
TRIM55-201ENST00000276573 CCDC129Q6ZRS4 1044 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 HMG20BQ9P0W2 317 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 ZDHHC9Q9Y397 364 aa11.5□□□□□ -0.57
TRIM55-201ENST00000276573 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
TRIM55-201ENST00000276573 RIC1Q4ADV7 1423 aa11.49□□□□□ -0.57
TRIM55-201ENST00000276573 TRAK2O60296 914 aa11.49□□□□□ -0.57
TRIM55-201ENST00000276573 ONECUT3O60422 494 aaPredicted RBP11.49□□□□□ -0.57
TRIM55-201ENST00000276573 BAG4O95429 457 aaKnown RBP11.49□□□□□ -0.57
TRIM55-201ENST00000276573 FKBP4Q02790 459 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRIM55-201ENST00000276573 PKP1Q13835 747 aa11.49□□□□□ -0.57
TRIM55-201ENST00000276573 COL5A3P25940 1745 aaPredicted RBP11.49□□□□□ -0.57
TRIM55-201ENST00000276573 RGL2O15211 777 aa11.48□□□□□ -0.57
TRIM55-201ENST00000276573 RPS6KA4O75676 772 aa11.48□□□□□ -0.57
TRIM55-201ENST00000276573 PTMSP20962 102 aa11.48□□□□□ -0.57
TRIM55-201ENST00000276573 SCARF1Q14162 830 aa11.48□□□□□ -0.57
TRIM55-201ENST00000276573 SLFNL1Q499Z3 407 aa11.48□□□□□ -0.57
TRIM55-201ENST00000276573 FAM182BQ5T319 152 aa11.48□□□□□ -0.57
TRIM55-201ENST00000276573 ZNF512BQ96KM6 892 aaPredicted RBP11.48□□□□□ -0.57
TRIM55-201ENST00000276573 ALDH8A1Q9H2A2 487 aaPredicted RBP11.48□□□□□ -0.57
TRIM55-201ENST00000276573 THSD7AQ9UPZ6 1657 aa11.48□□□□□ -0.57
TRIM55-201ENST00000276573 MROH5Q6ZUA9 1318 aa11.48□□□□□ -0.57
TRIM55-201ENST00000276573 LRRFIP1Q32MZ4 808 aaKnown RBP11.48□□□□□ -0.57
TRIM55-201ENST00000276573 CCDC152Q4G0S7 254 aa11.48□□□□□ -0.57
TRIM55-201ENST00000276573 ZSCAN31Q96LW9 406 aaPredicted RBP11.48□□□□□ -0.57
TRIM55-201ENST00000276573 LARP6Q9BRS8 491 aaKnown RBP11.48□□□□□ -0.57
TRIM55-201ENST00000276573 SEC31BQ9NQW1 1179 aa11.48□□□□□ -0.57
TRIM55-201ENST00000276573 ABCC12Q96J65 1359 aa11.48□□□□□ -0.57
TRIM55-201ENST00000276573 RPAP1Q9BWH6 1393 aaPredicted RBP11.48□□□□□ -0.57
TRIM55-201ENST00000276573 SPEF2Q9C093 1822 aa11.47□□□□□ -0.57
TRIM55-201ENST00000276573 AFF2P51816 1311 aa11.47□□□□□ -0.57
TRIM55-201ENST00000276573 FGFR2P21802 821 aa11.47□□□□□ -0.57
TRIM55-201ENST00000276573 ZAP70P43403 619 aa11.47□□□□□ -0.57
TRIM55-201ENST00000276573 TAF6LQ9Y6J9 622 aa11.47□□□□□ -0.57
TRIM55-201ENST00000276573 RTL9Q8NET4 1388 aa11.47□□□□□ -0.57
TRIM55-201ENST00000276573 ZFYP08048 801 aaPredicted RBP11.47□□□□□ -0.57
TRIM55-201ENST00000276573 KRT32Q14532 448 aa11.47□□□□□ -0.57
TRIM55-201ENST00000276573 BLOC1S2Q6QNY1 142 aa11.47□□□□□ -0.57
TRIM55-201ENST00000276573 HELBQ8NG08 1087 aaPredicted RBP11.47□□□□□ -0.57
TRIM55-201ENST00000276573 LPIN2Q92539 896 aa11.47□□□□□ -0.57
TRIM55-201ENST00000276573 MPHOSPH8Q99549 860 aa11.47□□□□□ -0.57
TRIM55-201ENST00000276573 DSCC1Q9BVC3 393 aa11.47□□□□□ -0.57
TRIM55-201ENST00000276573 GOLGA6L22H0YM25 854 aa11.46□□□□□ -0.58
TRIM55-201ENST00000276573 BRD1O95696 1058 aa11.46□□□□□ -0.58
TRIM55-201ENST00000276573 RPS6KB1P23443 525 aa11.46□□□□□ -0.58
TRIM55-201ENST00000276573 MCAMP43121 646 aa11.46□□□□□ -0.58
TRIM55-201ENST00000276573 PUM3Q15397 648 aaKnown RBP11.46□□□□□ -0.58
TRIM55-201ENST00000276573 SKOR2Q2VWA4 1001 aaPredicted RBP11.46□□□□□ -0.58
TRIM55-201ENST00000276573 SMIM5Q71RC9 77 aa11.46□□□□□ -0.58
TRIM55-201ENST00000276573 BCL2L12Q9HB09 334 aa11.46□□□□□ -0.58
TRIM55-201ENST00000276573 SH2B1Q9NRF2 756 aaPredicted RBP11.46□□□□□ -0.58
TRIM55-201ENST00000276573 NARFQ9UHQ1 456 aa11.46□□□□□ -0.58
TRIM55-201ENST00000276573 TRPC5Q9UL62 973 aaPredicted RBP11.46□□□□□ -0.58
TRIM55-201ENST00000276573 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.46□□□□□ -0.58
TRIM55-201ENST00000276573 CYP21A2P08686 494 aa11.45□□□□□ -0.58
TRIM55-201ENST00000276573 COL9A3Q14050 684 aaPredicted RBP11.45□□□□□ -0.58
TRIM55-201ENST00000276573 ERFEQ4G0M1 354 aa11.45□□□□□ -0.58
TRIM55-201ENST00000276573 SLC10A5Q5PT55 438 aa11.45□□□□□ -0.58
TRIM55-201ENST00000276573 OSBP2Q969R2 916 aa11.45□□□□□ -0.58
TRIM55-201ENST00000276573 CCNL1Q9UK58 526 aaPredicted RBP11.45□□□□□ -0.58
TRIM55-201ENST00000276573 MAST3O60307 1309 aa11.45□□□□□ -0.58
TRIM55-201ENST00000276573 DDX60Q8IY21 1712 aaKnown RBP11.45□□□□□ -0.58
TRIM55-201ENST00000276573 BTAF1O14981 1849 aa11.45□□□□□ -0.58
TRIM55-201ENST00000276573 M0R2C6 588 aa11.45□□□□□ -0.58
TRIM55-201ENST00000276573 LARGE1O95461 756 aa11.45□□□□□ -0.58
TRIM55-201ENST00000276573 UQCRFS1P1P0C7P4 283 aa11.45□□□□□ -0.58
TRIM55-201ENST00000276573 HSPD1P10809 573 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms