RNA–Protein interactions for RNA: ENST00000276105.3

SNX12-201, Transcript of sorting nexin 12, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene SNX12, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-201ENST00000276105 TRPM7Q96QT4 1865 aa12.94□□□□□ -0.34
SNX12-201ENST00000276105 NEURL1BA8MQ27 555 aa12.94□□□□□ -0.34
SNX12-201ENST00000276105 CTSWP56202 376 aa12.94□□□□□ -0.34
SNX12-201ENST00000276105 FLIIQ13045 1269 aa12.94□□□□□ -0.34
SNX12-201ENST00000276105 DEFB115Q30KQ5 88 aa12.94□□□□□ -0.34
SNX12-201ENST00000276105 ANKIB1Q9P2G1 1089 aa12.94□□□□□ -0.34
SNX12-201ENST00000276105 CNOT7Q9UIV1 285 aaKnown RBP12.94□□□□□ -0.34
SNX12-201ENST00000276105 GGA1Q9UJY5 639 aa12.94□□□□□ -0.34
SNX12-201ENST00000276105 XDHP47989 1333 aa12.93□□□□□ -0.34
SNX12-201ENST00000276105 COL4A1P02462 1669 aa12.93□□□□□ -0.34
SNX12-201ENST00000276105 H7C1W4 665 aa12.93□□□□□ -0.34
SNX12-201ENST00000276105 ECE2O60344 883 aa12.93□□□□□ -0.34
SNX12-201ENST00000276105 VAMP4O75379 141 aa12.93□□□□□ -0.34
SNX12-201ENST00000276105 VEGFBP49765 207 aa12.93□□□□□ -0.34
SNX12-201ENST00000276105 PLA2G12BQ9BX93 195 aa12.93□□□□□ -0.34
SNX12-201ENST00000276105 MYH16Q9H6N6 1097 aa12.93□□□□□ -0.34
SNX12-201ENST00000276105 DBNDD1Q9H9R9 158 aa12.93□□□□□ -0.34
SNX12-201ENST00000276105 G3V3G9 751 aa12.92□□□□□ -0.34
SNX12-201ENST00000276105 PSMD14O00487 310 aa12.92□□□□□ -0.34
SNX12-201ENST00000276105 ZNF609O15014 1411 aa12.92□□□□□ -0.34
SNX12-201ENST00000276105 RIMBP2O15034 1052 aa12.92□□□□□ -0.34
SNX12-201ENST00000276105 UFL1O94874 794 aa12.92□□□□□ -0.34
SNX12-201ENST00000276105 ATP2B4P23634 1241 aa12.92□□□□□ -0.34
SNX12-201ENST00000276105 FKBP5Q13451 457 aaPredicted RBP12.92□□□□□ -0.34
SNX12-201ENST00000276105 DCAF8Q5TAQ9 597 aa12.92□□□□□ -0.34
SNX12-201ENST00000276105 G2E3Q7L622 706 aa12.92□□□□□ -0.34
SNX12-201ENST00000276105 LINS1Q8NG48 757 aa12.92□□□□□ -0.34
SNX12-201ENST00000276105 TTLL11Q8NHH1 800 aa12.92□□□□□ -0.34
SNX12-201ENST00000276105 DNAAF4Q8WXU2 420 aa12.92□□□□□ -0.34
SNX12-201ENST00000276105 BSDC1Q9NW68 430 aaPredicted RBP12.92□□□□□ -0.34
SNX12-201ENST00000276105 ABT1Q9ULW3 272 aaKnown RBP12.92□□□□□ -0.34
SNX12-201ENST00000276105 VIL1P09327 827 aaKnown RBP12.91□□□□□ -0.34
SNX12-201ENST00000276105 ECE1P42892 770 aa12.91□□□□□ -0.34
SNX12-201ENST00000276105 GCKRQ14397 625 aa12.91□□□□□ -0.34
SNX12-201ENST00000276105 CWF19L2Q2TBE0 894 aaKnown RBP12.91□□□□□ -0.34
SNX12-201ENST00000276105 CDC37L1Q7L3B6 337 aa12.91□□□□□ -0.34
SNX12-201ENST00000276105 MICALL2Q8IY33 904 aa12.91□□□□□ -0.34
SNX12-201ENST00000276105 JARID2Q92833 1246 aaPredicted RBP12.91□□□□□ -0.34
SNX12-201ENST00000276105 HIRAP54198 1017 aaPredicted RBP12.9□□□□□ -0.34
SNX12-201ENST00000276105 EXOSC9Q06265 439 aaKnown RBP12.9□□□□□ -0.34
SNX12-201ENST00000276105 DOK7Q18PE1 504 aa12.9□□□□□ -0.34
SNX12-201ENST00000276105 CST9Q5W186 159 aa12.9□□□□□ -0.34
SNX12-201ENST00000276105 UBE3BQ7Z3V4 1068 aa12.9□□□□□ -0.34
SNX12-201ENST00000276105 PODNQ7Z5L7 613 aa12.9□□□□□ -0.34
SNX12-201ENST00000276105 TRPM4Q8TD43 1214 aa12.9□□□□□ -0.34
SNX12-201ENST00000276105 AIDAQ96BJ3 306 aa12.9□□□□□ -0.34
SNX12-201ENST00000276105 HHIPL1Q96JK4 782 aa12.9□□□□□ -0.34
SNX12-201ENST00000276105 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
SNX12-201ENST00000276105 TLL2Q9Y6L7 1015 aa12.9□□□□□ -0.34
SNX12-201ENST00000276105 WDR33Q9C0J8 1336 aaKnown RBP12.89□□□□□ -0.35
SNX12-201ENST00000276105 IGHMBP2P38935 993 aaKnown RBP12.89□□□□□ -0.35
SNX12-201ENST00000276105 MAP2K1Q02750 393 aaPredicted RBP12.89□□□□□ -0.35
SNX12-201ENST00000276105 AGBL3Q8NEM8 1001 aa12.89□□□□□ -0.35
SNX12-201ENST00000276105 CCDC85AQ96PX6 553 aaPredicted RBP12.89□□□□□ -0.35
SNX12-201ENST00000276105 GREM2Q9H772 168 aa12.89□□□□□ -0.35
SNX12-201ENST00000276105 WBP1LQ9NX94 342 aa12.89□□□□□ -0.35
SNX12-201ENST00000276105 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
SNX12-201ENST00000276105 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
SNX12-201ENST00000276105 PSME4Q14997 1843 aa12.89□□□□□ -0.35
SNX12-201ENST00000276105 MED23Q9ULK4 1368 aa12.89□□□□□ -0.35
SNX12-201ENST00000276105 TRAF5O00463 557 aa12.88□□□□□ -0.35
SNX12-201ENST00000276105 CSF1RP07333 972 aa12.88□□□□□ -0.35
SNX12-201ENST00000276105 CTCFP49711 727 aaPredicted RBP12.88□□□□□ -0.35
SNX12-201ENST00000276105 CASP7P55210 303 aa12.88□□□□□ -0.35
SNX12-201ENST00000276105 GLIS2Q9BZE0 524 aaPredicted RBP12.88□□□□□ -0.35
SNX12-201ENST00000276105 PRDM10Q9NQV6 1147 aa12.88□□□□□ -0.35
SNX12-201ENST00000276105 LEMD3Q9Y2U8 911 aa12.88□□□□□ -0.35
SNX12-201ENST00000276105 SCN9AQ15858 1988 aa12.88□□□□□ -0.35
SNX12-201ENST00000276105 THSD7BQ9C0I4 1608 aa12.88□□□□□ -0.35
SNX12-201ENST00000276105 CELF2O95319 508 aaKnown RBP12.87□□□□□ -0.35
SNX12-201ENST00000276105 MMP14P50281 582 aa12.87□□□□□ -0.35
SNX12-201ENST00000276105 FMR1Q06787 632 aaKnown RBP eCLIP12.87□□□□□ -0.35
SNX12-201ENST00000276105 RSBN1LQ6PCB5 846 aaPredicted RBP12.87□□□□□ -0.35
SNX12-201ENST00000276105 SAMD7Q7Z3H4 446 aa12.87□□□□□ -0.35
SNX12-201ENST00000276105 SAPCD2Q86UD0 394 aa12.87□□□□□ -0.35
SNX12-201ENST00000276105 CAPNS2Q96L46 248 aa12.87□□□□□ -0.35
SNX12-201ENST00000276105 GPR101Q96P66 508 aaPredicted RBP12.87□□□□□ -0.35
SNX12-201ENST00000276105 ANKRD2Q9GZV1 360 aa12.87□□□□□ -0.35
SNX12-201ENST00000276105 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
SNX12-201ENST00000276105 KCNQ5Q9NR82 932 aa12.87□□□□□ -0.35
SNX12-201ENST00000276105 SHTN1A0MZ66 631 aa12.86□□□□□ -0.35
SNX12-201ENST00000276105 USP17L3A6NCW0 530 aa12.86□□□□□ -0.35
SNX12-201ENST00000276105 USP17L4A6NCW7 530 aa12.86□□□□□ -0.35
SNX12-201ENST00000276105 FOXN1O15353 648 aa12.86□□□□□ -0.35
SNX12-201ENST00000276105 ITGA6P23229 1130 aa12.86□□□□□ -0.35
SNX12-201ENST00000276105 MAP2K2P36507 400 aa12.86□□□□□ -0.35
SNX12-201ENST00000276105 CCT4P50991 539 aaKnown RBP12.86□□□□□ -0.35
SNX12-201ENST00000276105 ZNF280AP59817 542 aaPredicted RBP12.86□□□□□ -0.35
SNX12-201ENST00000276105 TBC1D10BQ4KMP7 808 aaPredicted RBP12.86□□□□□ -0.35
SNX12-201ENST00000276105 BEND3Q5T5X7 828 aa12.86□□□□□ -0.35
SNX12-201ENST00000276105 USP17L1Q7RTZ2 530 aa12.86□□□□□ -0.35
SNX12-201ENST00000276105 DCPSQ96C86 337 aaKnown RBP12.86□□□□□ -0.35
SNX12-201ENST00000276105 MPHOSPH8Q99549 860 aa12.86□□□□□ -0.35
SNX12-201ENST00000276105 COA1Q9GZY4 146 aa12.86□□□□□ -0.35
SNX12-201ENST00000276105 ZNF521Q96K83 1311 aa12.86□□□□□ -0.35
SNX12-201ENST00000276105 KIF4BQ2VIQ3 1234 aa12.85□□□□□ -0.35
SNX12-201ENST00000276105 KRT26Q7Z3Y9 468 aa12.85□□□□□ -0.35
SNX12-201ENST00000276105 GMLQ99445 158 aa12.85□□□□□ -0.35
SNX12-201ENST00000276105 SPEF2Q9C093 1822 aa12.85□□□□□ -0.35
SNX12-201ENST00000276105 MYO3BQ8WXR4 1341 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms