RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 BIN1O00499 593 aa9.07□□□□□ -0.96
LIMD1-201ENST00000273317 PSMA7O14818 248 aa9.07□□□□□ -0.96
LIMD1-201ENST00000273317 UQCRFS1P1P0C7P4 283 aa9.07□□□□□ -0.96
LIMD1-201ENST00000273317 CCDC14Q49A88 953 aa9.07□□□□□ -0.96
LIMD1-201ENST00000273317 CPLX3Q8WVH0 158 aa9.07□□□□□ -0.96
LIMD1-201ENST00000273317 NEK1Q96PY6 1258 aa9.07□□□□□ -0.96
LIMD1-201ENST00000273317 SLU7O95391 586 aaKnown RBP9.07□□□□□ -0.96
LIMD1-201ENST00000273317 RRAGBQ5VZM2 374 aa9.07□□□□□ -0.96
LIMD1-201ENST00000273317 SWAP70Q9UH65 585 aa9.07□□□□□ -0.96
LIMD1-201ENST00000273317 ANO6Q4KMQ2 910 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 ZFYVE9O95405 1425 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 CCT2P78371 535 aaKnown RBP9.06□□□□□ -0.96
LIMD1-201ENST00000273317 NOLC1Q14978 699 aaKnown RBP eCLIP9.06□□□□□ -0.96
LIMD1-201ENST00000273317 SYT1P21579 422 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 EBAG9O00559 213 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 MXRA7P84157 204 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 TTC31Q49AM3 519 aaPredicted RBP9.06□□□□□ -0.96
LIMD1-201ENST00000273317 RAB3IL1Q8TBN0 382 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 ARFGAP2Q8N6H7 521 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 DRC1Q96MC2 740 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 B4GALNT4Q76KP1 1039 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 NBPF11Q86T75 865 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 MICU3Q86XE3 530 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 BRAPQ7Z569 592 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 WTAPQ15007 396 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 RSRC1Q96IZ7 334 aaKnown RBP9.06□□□□□ -0.96
LIMD1-201ENST00000273317 SLC26A6Q9BXS9 759 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 HDXQ7Z353 690 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 BICD1Q96G01 975 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 SPAG5Q96R06 1193 aa9.06□□□□□ -0.96
LIMD1-201ENST00000273317 CALML3P27482 149 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 NAP1L3Q99457 506 aaPredicted RBP9.05□□□□□ -0.96
LIMD1-201ENST00000273317 SAMD15Q9P1V8 674 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 CCDC110Q8TBZ0 833 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 MYO1BO43795 1136 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 RTN1Q16799 776 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 IFT74Q96LB3 600 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 MTRF1LQ9UGC7 380 aaKnown RBP9.05□□□□□ -0.96
LIMD1-201ENST00000273317 TTC41PQ6P2S7 1318 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 HCLS1P14317 486 aaPredicted RBP9.05□□□□□ -0.96
LIMD1-201ENST00000273317 CLUL1Q15846 466 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 CALM1P0DP23 149 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 CALM2P0DP24 149 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 CALM3P0DP25 149 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 TNNC1P63316 161 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 SETDB1Q15047 1291 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 CNGA4Q8IV77 575 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 IDEP14735 1019 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 GNAT2P19087 354 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 CCDC50Q8IVM0 306 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 FAM76AQ8TAV0 307 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 ESR2Q92731 530 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 UNC13AQ9UPW8 1703 aa9.05□□□□□ -0.96
LIMD1-201ENST00000273317 RSPH14Q9UHP6 348 aa9.04□□□□□ -0.96
LIMD1-201ENST00000273317 PUF60Q9UHX1 559 aaKnown RBP9.04□□□□□ -0.96
LIMD1-201ENST00000273317 TRMT112Q9UI30 125 aaKnown RBP9.04□□□□□ -0.96
LIMD1-201ENST00000273317 TRIM14Q14142 442 aa9.04□□□□□ -0.96
LIMD1-201ENST00000273317 BICDL1Q6ZP65 573 aa9.04□□□□□ -0.96
LIMD1-201ENST00000273317 ZBTB43O43298 467 aa9.04□□□□□ -0.96
LIMD1-201ENST00000273317 CIB2O75838 187 aa9.04□□□□□ -0.96
LIMD1-201ENST00000273317 UTP14AQ9BVJ6 771 aaKnown RBP9.04□□□□□ -0.96
LIMD1-201ENST00000273317 STIM2Q9P246 746 aa9.04□□□□□ -0.96
LIMD1-201ENST00000273317 MAP3K2Q9Y2U5 619 aa9.04□□□□□ -0.96
LIMD1-201ENST00000273317 ZKSCAN5Q9Y2L8 839 aa9.04□□□□□ -0.96
LIMD1-201ENST00000273317 ZBTB16Q05516 673 aa9.04□□□□□ -0.96
LIMD1-201ENST00000273317 APBB1IPQ7Z5R6 666 aaPredicted RBP9.04□□□□□ -0.96
LIMD1-201ENST00000273317 B4DLN1 442 aa9.04□□□□□ -0.96
LIMD1-201ENST00000273317 MRPL12P52815 198 aaKnown RBP9.04□□□□□ -0.96
LIMD1-201ENST00000273317 LACTBP83111 547 aaPredicted RBP9.04□□□□□ -0.96
LIMD1-201ENST00000273317 UBE2Q2Q8WVN8 375 aa9.04□□□□□ -0.96
LIMD1-201ENST00000273317 TYRO3Q06418 890 aa9.04□□□□□ -0.96
LIMD1-201ENST00000273317 MIS18AQ9NYP9 233 aa9.04□□□□□ -0.96
LIMD1-201ENST00000273317 CNPY2Q9Y2B0 182 aa9.04□□□□□ -0.96
LIMD1-201ENST00000273317 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.03□□□□□ -0.96
LIMD1-201ENST00000273317 IMPG2Q9BZV3 1241 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 HDAC9Q9UKV0 1011 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 F13A1P00488 732 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 GUCY1B3Q02153 619 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 KIF5AQ12840 1032 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 ASIC1P78348 528 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 C20orf194Q5TEA3 1177 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 PPP1R42Q7Z4L9 355 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 NDC80O14777 642 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 OGFRQ9NZT2 677 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 TMX3Q96JJ7 454 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 CAPN2P17655 700 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 NEK11Q8NG66 645 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 NAP1L4Q99733 375 aaKnown RBP9.03□□□□□ -0.96
LIMD1-201ENST00000273317 CCDC85AQ96PX6 553 aaPredicted RBP9.03□□□□□ -0.96
LIMD1-201ENST00000273317 CABP5Q9NP86 173 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 CEP83Q9Y592 693 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 TSPY2A6NKD2 308 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 MAP7D1Q3KQU3 841 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 MKRN1Q9UHC7 482 aaKnown RBP9.03□□□□□ -0.96
LIMD1-201ENST00000273317 DNAI1Q9UI46 699 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 RAD50Q92878 1312 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 KDM5BQ9UGL1 1544 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 ALDH1L1O75891 902 aa9.03□□□□□ -0.96
LIMD1-201ENST00000273317 INTS4Q96HW7 963 aaKnown RBP9.03□□□□□ -0.96
LIMD1-201ENST00000273317 USP48Q86UV5 1035 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms