RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 METTL24Q5JXM2 366 aa19.99■□□□□ 0.79
CCDC40-201ENST00000269318 CLEC17AQ6ZS10 378 aa19.99■□□□□ 0.79
CCDC40-201ENST00000269318 INTS4Q96HW7 963 aaKnown RBP19.99■□□□□ 0.79
CCDC40-201ENST00000269318 SLC27A2O14975 620 aa19.99■□□□□ 0.79
CCDC40-201ENST00000269318 NUCB2P80303 420 aa19.99■□□□□ 0.79
CCDC40-201ENST00000269318 USPL1Q5W0Q7 1092 aa19.99■□□□□ 0.79
CCDC40-201ENST00000269318 ZSWIM6Q9HCJ5 1215 aa19.99■□□□□ 0.79
CCDC40-201ENST00000269318 NIP7Q9Y221 180 aaKnown RBP eCLIP19.99■□□□□ 0.79
CCDC40-201ENST00000269318 LAMB2P55268 1798 aa19.99■□□□□ 0.79
CCDC40-201ENST00000269318 ABCC12Q96J65 1359 aa19.98■□□□□ 0.79
CCDC40-201ENST00000269318 RPAP1Q9BWH6 1393 aaPredicted RBP19.98■□□□□ 0.79
CCDC40-201ENST00000269318 HCLS1P14317 486 aaPredicted RBP19.98■□□□□ 0.79
CCDC40-201ENST00000269318 ZKSCAN1P17029 563 aaPredicted RBP19.98■□□□□ 0.79
CCDC40-201ENST00000269318 CASTP20810 708 aaKnown RBP19.98■□□□□ 0.79
CCDC40-201ENST00000269318 KCNQ4P56696 695 aa19.98■□□□□ 0.79
CCDC40-201ENST00000269318 GSE1Q14687 1217 aa19.98■□□□□ 0.79
CCDC40-201ENST00000269318 ATP2B3Q16720 1220 aa19.98■□□□□ 0.79
CCDC40-201ENST00000269318 MCMDC2Q4G0Z9 681 aa19.98■□□□□ 0.79
CCDC40-201ENST00000269318 CCDC158Q5M9N0 1113 aa19.98■□□□□ 0.79
CCDC40-201ENST00000269318 CLEC4GQ6UXB4 293 aa19.98■□□□□ 0.79
CCDC40-201ENST00000269318 CNNM1Q9NRU3 951 aa19.98■□□□□ 0.79
CCDC40-201ENST00000269318 AK2P54819 239 aa19.97■□□□□ 0.79
CCDC40-201ENST00000269318 MEX3CQ5U5Q3 659 aaKnown RBP19.97■□□□□ 0.79
CCDC40-201ENST00000269318 NOL8Q76FK4 1167 aaKnown RBP19.97■□□□□ 0.79
CCDC40-201ENST00000269318 JAKMIP1Q96N16 626 aaKnown RBP19.97■□□□□ 0.79
CCDC40-201ENST00000269318 GBP4Q96PP9 640 aa19.97■□□□□ 0.79
CCDC40-201ENST00000269318 SEC62Q99442 399 aaKnown RBP19.97■□□□□ 0.79
CCDC40-201ENST00000269318 ZNF652Q9Y2D9 606 aa19.97■□□□□ 0.79
CCDC40-201ENST00000269318 ATRNO75882 1429 aa19.97■□□□□ 0.79
CCDC40-201ENST00000269318 DDX11L8A8MPP1 907 aa19.97■□□□□ 0.79
CCDC40-201ENST00000269318 ONECUT3O60422 494 aaPredicted RBP19.97■□□□□ 0.79
CCDC40-201ENST00000269318 KCNJ4P48050 445 aa19.97■□□□□ 0.79
CCDC40-201ENST00000269318 PKP1Q13835 747 aa19.97■□□□□ 0.79
CCDC40-201ENST00000269318 AFF2P51816 1311 aa19.97■□□□□ 0.79
CCDC40-201ENST00000269318 FAM177BA6PVY3 158 aa19.96■□□□□ 0.79
CCDC40-201ENST00000269318 RGL2O15211 777 aa19.96■□□□□ 0.79
CCDC40-201ENST00000269318 CPA1P15085 419 aa19.96■□□□□ 0.79
CCDC40-201ENST00000269318 TSGA10IPQ3SY00 556 aa19.96■□□□□ 0.79
CCDC40-201ENST00000269318 TTC39AQ5SRH9 613 aa19.96■□□□□ 0.79
CCDC40-201ENST00000269318 RTL9Q8NET4 1388 aa19.96■□□□□ 0.79
CCDC40-201ENST00000269318 PDE8BO95263 885 aa19.95■□□□□ 0.78
CCDC40-201ENST00000269318 ZMYM1Q5SVZ6 1142 aa19.95■□□□□ 0.78
CCDC40-201ENST00000269318 FAM182BQ5T319 152 aa19.95■□□□□ 0.78
CCDC40-201ENST00000269318 GORABQ5T7V8 394 aa19.95■□□□□ 0.78
CCDC40-201ENST00000269318 RC3H1Q5TC82 1133 aaKnown RBP19.95■□□□□ 0.78
CCDC40-201ENST00000269318 VPS53Q5VIR6 699 aa19.95■□□□□ 0.78
CCDC40-201ENST00000269318 CCDC129Q6ZRS4 1044 aa19.95■□□□□ 0.78
CCDC40-201ENST00000269318 RUFY3Q7L099 469 aa19.95■□□□□ 0.78
CCDC40-201ENST00000269318 HELLSQ9NRZ9 838 aa19.95■□□□□ 0.78
CCDC40-201ENST00000269318 SCN7AQ01118 1682 aa19.95■□□□□ 0.78
CCDC40-201ENST00000269318 SCARF1Q14162 830 aa19.95■□□□□ 0.78
CCDC40-201ENST00000269318 RNF20Q5VTR2 975 aa19.95■□□□□ 0.78
CCDC40-201ENST00000269318 HMG20BQ9P0W2 317 aa19.95■□□□□ 0.78
CCDC40-201ENST00000269318 ZNF512BQ96KM6 892 aaPredicted RBP19.94■□□□□ 0.78
CCDC40-201ENST00000269318 LIMCH1Q9UPQ0 1083 aa19.94■□□□□ 0.78
CCDC40-201ENST00000269318 ZDHHC9Q9Y397 364 aa19.94■□□□□ 0.78
CCDC40-201ENST00000269318 CYP46A1Q9Y6A2 500 aa19.94■□□□□ 0.78
CCDC40-201ENST00000269318 TAF6LQ9Y6J9 622 aa19.94■□□□□ 0.78
CCDC40-201ENST00000269318 HSP90B1P14625 803 aaKnown RBP19.94■□□□□ 0.78
CCDC40-201ENST00000269318 SLFNL1Q499Z3 407 aa19.94■□□□□ 0.78
CCDC40-201ENST00000269318 PDRG1Q9NUG6 133 aa19.94■□□□□ 0.78
CCDC40-201ENST00000269318 MROH5Q6ZUA9 1318 aa19.93■□□□□ 0.78
CCDC40-201ENST00000269318 RNF113AO15541 343 aaKnown RBP19.93■□□□□ 0.78
CCDC40-201ENST00000269318 FKBP4Q02790 459 aaKnown RBP eCLIP19.93■□□□□ 0.78
CCDC40-201ENST00000269318 LY75O60449 1722 aa19.93■□□□□ 0.78
CCDC40-201ENST00000269318 FGFR2P21802 821 aa19.92■□□□□ 0.78
CCDC40-201ENST00000269318 CCDC152Q4G0S7 254 aa19.92■□□□□ 0.78
CCDC40-201ENST00000269318 SEC31BQ9NQW1 1179 aa19.92■□□□□ 0.78
CCDC40-201ENST00000269318 U3KPZ7 1027 aaPredicted RBP19.92■□□□□ 0.78
CCDC40-201ENST00000269318 ARAP2Q8WZ64 1704 aa19.92■□□□□ 0.78
CCDC40-201ENST00000269318 SBF2Q86WG5 1849 aa19.92■□□□□ 0.78
CCDC40-201ENST00000269318 RPS6KA4O75676 772 aa19.92■□□□□ 0.78
CCDC40-201ENST00000269318 BAG4O95429 457 aaKnown RBP19.92■□□□□ 0.78
CCDC40-201ENST00000269318 PSMA5P28066 241 aa19.92■□□□□ 0.78
CCDC40-201ENST00000269318 BCL2L12Q9HB09 334 aa19.92■□□□□ 0.78
CCDC40-201ENST00000269318 TRPC5Q9UL62 973 aaPredicted RBP19.92■□□□□ 0.78
CCDC40-201ENST00000269318 ZAP70P43403 619 aa19.91■□□□□ 0.78
CCDC40-201ENST00000269318 COL9A3Q14050 684 aaPredicted RBP19.91■□□□□ 0.78
CCDC40-201ENST00000269318 AKAP11Q9UKA4 1901 aa19.9■□□□□ 0.78
CCDC40-201ENST00000269318 MAST3O60307 1309 aa19.9■□□□□ 0.78
CCDC40-201ENST00000269318 TRAK2O60296 914 aa19.9■□□□□ 0.78
CCDC40-201ENST00000269318 MCAMP43121 646 aa19.9■□□□□ 0.78
CCDC40-201ENST00000269318 PUM3Q15397 648 aaKnown RBP19.9■□□□□ 0.78
CCDC40-201ENST00000269318 CCNL1Q9UK58 526 aaPredicted RBP19.9■□□□□ 0.78
CCDC40-201ENST00000269318 PI16Q6UXB8 463 aa19.9■□□□□ 0.78
CCDC40-201ENST00000269318 SMIM5Q71RC9 77 aa19.9■□□□□ 0.78
CCDC40-201ENST00000269318 LPIN2Q92539 896 aa19.9■□□□□ 0.78
CCDC40-201ENST00000269318 DSCC1Q9BVC3 393 aa19.9■□□□□ 0.78
CCDC40-201ENST00000269318 ALDH8A1Q9H2A2 487 aaPredicted RBP19.9■□□□□ 0.78
CCDC40-201ENST00000269318 NARFQ9UHQ1 456 aa19.9■□□□□ 0.78
CCDC40-201ENST00000269318 SEPT12Q8IYM1 358 aa19.89■□□□□ 0.77
CCDC40-201ENST00000269318 LARP6Q9BRS8 491 aaKnown RBP19.89■□□□□ 0.77
CCDC40-201ENST00000269318 TAF1LQ8IZX4 1826 aa19.89■□□□□ 0.77
CCDC40-201ENST00000269318 LARGE1O95461 756 aa19.88■□□□□ 0.77
CCDC40-201ENST00000269318 ZFYP08048 801 aaPredicted RBP19.88■□□□□ 0.77
CCDC40-201ENST00000269318 RPS6KB1P23443 525 aa19.88■□□□□ 0.77
CCDC40-201ENST00000269318 ARID4AP29374 1257 aaPredicted RBP19.88■□□□□ 0.77
CCDC40-201ENST00000269318 LRRFIP1Q32MZ4 808 aaKnown RBP19.88■□□□□ 0.77
CCDC40-201ENST00000269318 ERFEQ4G0M1 354 aa19.88■□□□□ 0.77
CCDC40-201ENST00000269318 BLOC1S2Q6QNY1 142 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms