RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 VAT1LQ9HCJ6 419 aa11.69□□□□□ -0.54
LAMA3-201ENST00000269217 C6orf229H3BNL8 230 aa11.69□□□□□ -0.54
LAMA3-201ENST00000269217 GTF2F1P35269 517 aaKnown RBP eCLIP11.69□□□□□ -0.54
LAMA3-201ENST00000269217 CYLC1P35663 651 aaPredicted RBP11.69□□□□□ -0.54
LAMA3-201ENST00000269217 ZNF830Q96NB3 372 aaPredicted RBP11.69□□□□□ -0.54
LAMA3-201ENST00000269217 DNAJC25Q9H1X3 360 aa11.69□□□□□ -0.54
LAMA3-201ENST00000269217 TNNQ9UQP3 1299 aa11.69□□□□□ -0.54
LAMA3-201ENST00000269217 FLT4P35916 1363 aa11.69□□□□□ -0.54
LAMA3-201ENST00000269217 AKR1B10O60218 316 aa11.69□□□□□ -0.54
LAMA3-201ENST00000269217 HLA-DOAP06340 250 aa11.69□□□□□ -0.54
LAMA3-201ENST00000269217 NOP2P46087 812 aaKnown RBP11.69□□□□□ -0.54
LAMA3-201ENST00000269217 AOPEPQ8N6M6 819 aa11.69□□□□□ -0.54
LAMA3-201ENST00000269217 NUP153P49790 1475 aaKnown RBP11.68□□□□□ -0.54
LAMA3-201ENST00000269217 PRIM1P49642 420 aaKnown RBP11.68□□□□□ -0.54
LAMA3-201ENST00000269217 IFIT1BQ5T764 474 aaKnown RBP11.68□□□□□ -0.54
LAMA3-201ENST00000269217 HOOK3Q86VS8 718 aa11.68□□□□□ -0.54
LAMA3-201ENST00000269217 PLEKHM2Q8IWE5 1019 aa11.68□□□□□ -0.54
LAMA3-201ENST00000269217 RAD50Q92878 1312 aa11.68□□□□□ -0.54
LAMA3-201ENST00000269217 UHRF1BP1LA0JNW5 1464 aa11.68□□□□□ -0.54
LAMA3-201ENST00000269217 RTL1A6NKG5 1358 aa11.68□□□□□ -0.54
LAMA3-201ENST00000269217 SOS1Q07889 1333 aaPredicted RBP11.68□□□□□ -0.54
LAMA3-201ENST00000269217 STAT6P42226 847 aa11.68□□□□□ -0.54
LAMA3-201ENST00000269217 GNAQP50148 359 aa11.68□□□□□ -0.54
LAMA3-201ENST00000269217 AK2P54819 239 aa11.68□□□□□ -0.54
LAMA3-201ENST00000269217 TYRO3Q06418 890 aa11.68□□□□□ -0.54
LAMA3-201ENST00000269217 MTHFSDQ2M296 383 aaKnown RBP11.68□□□□□ -0.54
LAMA3-201ENST00000269217 KRT222Q8N1A0 295 aa11.68□□□□□ -0.54
LAMA3-201ENST00000269217 GIMAP7Q8NHV1 300 aa11.68□□□□□ -0.54
LAMA3-201ENST00000269217 PAG1Q9NWQ8 432 aa11.68□□□□□ -0.54
LAMA3-201ENST00000269217 SLC4A4Q9Y6R1 1079 aa11.68□□□□□ -0.54
LAMA3-201ENST00000269217 NPHP3Q7Z494 1330 aa11.68□□□□□ -0.54
LAMA3-201ENST00000269217 CYP7A1P22680 504 aa11.68□□□□□ -0.54
LAMA3-201ENST00000269217 DHX37Q8IY37 1157 aaKnown RBP11.68□□□□□ -0.54
LAMA3-201ENST00000269217 ADAMTS2O95450 1211 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 CCDC175P0C221 793 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 AFMP43652 599 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 RNF187Q5TA31 235 aaPredicted RBP11.67□□□□□ -0.54
LAMA3-201ENST00000269217 CADPS2Q86UW7 1296 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 SPTLC2O15270 562 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 PRC1O43663 620 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 SRRTQ9BXP5 876 aaKnown RBP11.67□□□□□ -0.54
LAMA3-201ENST00000269217 MACROD2A1Z1Q3 448 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 CCDC172P0C7W6 258 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 TSPYL6Q8N831 410 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 DNAI1Q9UI46 699 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 NPATQ14207 1427 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 GOLGA6L10A0A0M3HER8 536 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 ZCRB1Q8TBF4 217 aaKnown RBP11.67□□□□□ -0.54
LAMA3-201ENST00000269217 SCLT1Q96NL6 688 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 ZSWIM4Q9H7M6 989 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 CABP5Q9NP86 173 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 RIMS2Q9UQ26 1411 aa11.67□□□□□ -0.54
LAMA3-201ENST00000269217 CTAGE15A4D2H0 777 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 DCAF8L1A6NGE4 600 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 CTAGE8P0CG41 777 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 CREB3L3Q68CJ9 461 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 CTAGE6Q86UF2 777 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 CTAGE4Q8IX94 777 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 ZGPATQ8N5A5 531 aaKnown RBP11.66□□□□□ -0.54
LAMA3-201ENST00000269217 ERMNQ8TAM6 284 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 STX8Q9UNK0 236 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 CTTNBP2Q8WZ74 1663 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 TBCAO75347 108 aaKnown RBP11.66□□□□□ -0.54
LAMA3-201ENST00000269217 LMAN1P49257 510 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 PRPF4BQ13523 1007 aaKnown RBP11.66□□□□□ -0.54
LAMA3-201ENST00000269217 SLC9C2Q5TAH2 1124 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 MAATS1Q7Z4T9 603 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 ARFGAP3Q9NP61 516 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 CHMLP26374 656 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 CHRNA2Q15822 529 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 SYCP3Q8IZU3 236 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 USP26Q9BXU7 913 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 PA2G4Q9UQ80 394 aaKnown RBP11.66□□□□□ -0.54
LAMA3-201ENST00000269217 ABCC1P33527 1531 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 MAP3K5Q99683 1374 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 PSMA7O14818 248 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 MYO1BO43795 1136 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 RNF113AO15541 343 aaKnown RBP11.66□□□□□ -0.54
LAMA3-201ENST00000269217 TSPY3P0CV98 308 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 TSPY8P0CW00 308 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 SYT1P21579 422 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 CTNNA2P26232 953 aa11.66□□□□□ -0.54
LAMA3-201ENST00000269217 MARCKSP29966 332 aaPredicted RBP11.66□□□□□ -0.54
LAMA3-201ENST00000269217 CFAP43Q8NDM7 1665 aa11.65□□□□□ -0.54
LAMA3-201ENST00000269217 SLC39A6Q13433 755 aa11.65□□□□□ -0.54
LAMA3-201ENST00000269217 RUFY3Q7L099 469 aa11.65□□□□□ -0.54
LAMA3-201ENST00000269217 ZNF518AQ6AHZ1 1483 aa11.65□□□□□ -0.54
LAMA3-201ENST00000269217 TRIM75PA6NK02 468 aa11.65□□□□□ -0.54
LAMA3-201ENST00000269217 HSF2BPO75031 334 aa11.65□□□□□ -0.54
LAMA3-201ENST00000269217 CALM1P0DP23 149 aa11.65□□□□□ -0.54
LAMA3-201ENST00000269217 CALM2P0DP24 149 aa11.65□□□□□ -0.54
LAMA3-201ENST00000269217 CALM3P0DP25 149 aa11.65□□□□□ -0.54
LAMA3-201ENST00000269217 GNAT2P19087 354 aa11.65□□□□□ -0.54
LAMA3-201ENST00000269217 SLU7O95391 586 aaKnown RBP11.65□□□□□ -0.54
LAMA3-201ENST00000269217 GIGYF2Q6Y7W6 1299 aaKnown RBP11.65□□□□□ -0.54
LAMA3-201ENST00000269217 BRAPQ7Z569 592 aa11.65□□□□□ -0.54
LAMA3-201ENST00000269217 CEP112Q8N8E3 955 aa11.65□□□□□ -0.54
LAMA3-201ENST00000269217 TTC12Q9H892 705 aaPredicted RBP11.65□□□□□ -0.54
LAMA3-201ENST00000269217 RTL9Q8NET4 1388 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms